Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen12g028680 Solanum pennellii HOM05D006267 ORTHO05D007490 0.0e+00 1209.1 631 100.0
Solyc12g056170.2 Solanum lycopersicum HOM05D006267 ORTHO05D007490 0.0e+00 1172.5 631 97.1
PGSC0003DMG400004984 Solanum tuberosum HOM05D006267 ORTHO05D007490 0.0e+00 1083.9 690 85.2
Nitab4.5_0002381g0070 Nicotiana tabacum HOM05D006267 ORTHO05D007490 4.6e-248 861.3 649 74.0
Peaxi162Scf00117g01519 Petunia axillaris HOM05D006267 ORTHO05D007490 5.3e-236 821.2 651 70.8
Nitab4.5_0003366g0020 Nicotiana tabacum HOM05D006267 ORTHO05D007490 1.1e-230 803.5 663 69.7
Dinv37589 Davidia involucrata HOM05D006267 ORTHO05D007490 7.2e-108 395.6 685 42.5
Dinv38895 Davidia involucrata HOM05D006267 ORTHO05D007490 3.8e-93 346.7 614 42.3
Lj2A177G41 Lonicera japonica HOM05D006267 ORTHO05D007490 5.5e-92 342.8 614 42.3
Cc08_g15330 Coffea canephora HOM05D006267 ORTHO05D007490 3.9e-85 320.1 529 43.5
CSS0029775 Camellia sinensis var. sinensis HOM05D006267 ORTHO05D007490 3.7e-80 303.5 700 37.3
COL.COLO4_08352 Corchorus olitorius HOM05D006267 ORTHO05D007490 1.2e-78 298.5 662 36.7
QL02p033236 Quercus lobata HOM05D006267 ORTHO05D007490 2.8e-75 287.3 679 36.4
Thecc.03G287200 Theobroma cacao HOM05D006267 ORTHO05D007490 8.0e-75 285.8 677 36.0
GSVIVG01019426001 Vitis vinifera HOM05D006267 ORTHO05D007490 8.0e-75 285.8 696 37.2
Actinidia33723 Actinidia chinensis HOM05D006267 ORTHO05D007490 6.4e-72 276.2 650 36.8
Actinidia27358 Actinidia chinensis HOM05D006267 ORTHO05D007490 4.1e-71 273.5 641 36.3
Cfa012253 Carpinus fangiana HOM05D006267 ORTHO05D007490 4.1e-71 273.5 693 35.6
Hma1.2p1_0216F.1_g091140 Hydrangea macrophylla HOM05D006267 ORTHO05D007490 7.1e-71 272.7 600 37.8
Duzib084G0031 Durio zibethinus HOM05D006267 ORTHO05D007490 2.7e-70 270.8 672 35.6
MSTRG.1836 Avicennia marina HOM05D006267 ORTHO05D007490 1.1e-66 258.8 572 37.1
CiPaw.12G088700 Carya illinoinensis HOM05D006267 ORTHO05D007490 4.0e-66 256.9 582 36.9
Migut.E01211 Erythranthe guttata HOM05D006267 ORTHO05D007490 3.4e-65 253.8 659 34.9
Duzib205G1874 Durio zibethinus HOM05D006267 ORTHO05D007490 7.6e-65 252.7 649 35.9
Atru.chr9.2105 Acer truncatum HOM05D006267 ORTHO05D007490 1.7e-64 251.5 620 35.0
TAR629G1352 Trochodendron aralioides HOM05D006267 ORTHO05D007490 2.2e-64 251.1 646 34.7
Rhsim07G0086900 Rhododendron simsii HOM05D006267 ORTHO05D007490 6.4e-64 249.6 516 39.3
MD14G1113000 Malus domestica HOM05D006267 ORTHO05D007490 3.5e-62 243.8 656 35.2
Gohir.D11G022800 Gossypium hirsutum HOM05D006267 ORTHO05D007490 6.0e-62 243.0 589 36.2
Gorai.007G024600 Gossypium raimondii HOM05D006267 ORTHO05D007490 1.3e-61 241.9 589 36.0
DCAR_005575 Daucus carota HOM05D006267 ORTHO05D007490 5.1e-61 240.0 601 35.1
Ciclev10019222m.g Citrus clementina HOM05D006267 ORTHO05D007490 1.9e-60 238.0 677 32.9
FAN18G3550 Fragaria x ananassa HOM05D006267 ORTHO05D007490 1.9e-60 238.0 613 35.1
Glyma.08G018700 Glycine max HOM05D006267 ORTHO05D007490 2.5e-60 237.7 673 33.0
Gohir.A11G023100 Gossypium hirsutum HOM05D006267 ORTHO05D007490 2.5e-60 237.7 589 35.8
MSTRG.13864 Avicennia marina HOM05D006267 ORTHO05D007490 7.3e-60 236.1 572 35.0
Cpa.g.sc201.8 Carica papaya HOM05D006267 ORTHO05D007490 1.6e-59 235.0 701 33.4
SGA_v2.0_scaffold111G31467 Striga asiatica HOM05D006267 ORTHO05D007490 3.6e-59 233.8 611 34.9
FvH4_5g03290 Fragaria vesca HOM05D006267 ORTHO05D007490 6.2e-59 233.0 627 34.9
Prupe.5G107200 Prunus persica HOM05D006267 ORTHO05D007490 5.2e-58 229.9 570 36.5
MD06G1092500 Malus domestica HOM05D006267 ORTHO05D007490 8.9e-58 229.2 656 34.3
RcHm_v2.0_Chr7g0196491 Rosa chinensis HOM05D006267 ORTHO05D007490 5.8e-57 226.5 612 34.6
ClCG07G007820 Citrullus lanatus HOM05D006267 ORTHO05D007490 9.9e-57 225.7 566 37.1
Nn1g01698 Nelumbo nucifera HOM05D006267 ORTHO05D007490 2.9e-56 224.2 704 32.5
Manes.01G056900 Manihot esculenta HOM05D006267 ORTHO05D007490 3.8e-56 223.8 679 32.1
FAN04G2714 Fragaria x ananassa HOM05D006267 ORTHO05D007490 6.4e-56 223.0 626 33.9
AUR62010761 Chenopodium quinoa HOM05D006267 ORTHO05D007490 1.2e-54 218.8 703 31.2
Glyma.05G212200 Glycine max HOM05D006267 ORTHO05D007490 3.5e-54 217.2 679 31.7
Phvul.002G293500 Phaseolus vulgaris HOM05D006267 ORTHO05D007490 7.8e-54 216.1 671 31.3
VMungo0251G1048 Vigna mungo HOM05D006267 ORTHO05D007490 1.3e-53 215.3 671 31.1
arahy.Tifrunner.gnm1.ann1.SWZD22 Arachis hypogaea HOM05D006267 ORTHO05D007490 2.3e-53 214.5 674 32.2
AUR62019762 Chenopodium quinoa HOM05D006267 ORTHO05D007490 3.0e-53 214.2 626 33.1
arahy.Tifrunner.gnm1.ann1.BRCM5A Arachis hypogaea HOM05D006267 ORTHO05D007490 3.9e-53 213.8 674 32.0
EL10Ac5g12844 Beta vulgaris HOM05D006267 ORTHO05D007490 6.6e-53 213.0 697 32.1
FAN04G3088 Fragaria x ananassa HOM05D006267 ORTHO05D007490 1.1e-52 212.2 648 32.3
Lsat_1_v5_gn_3_11600 Lactuca sativa HOM05D006267 ORTHO05D007490 1.9e-52 211.5 651 32.0
ECA246G3109 Erigeron canadensis HOM05D006267 ORTHO05D007490 3.3e-52 210.7 600 33.7
TAR374G1011 Trochodendron aralioides HOM05D006267 ORTHO05D007490 3.3e-52 210.7 502 33.5
FAN08G1104 Fragaria x ananassa HOM05D006267 ORTHO05D007490 7.3e-52 209.5 668 32.9
HanXRQChr17g0533871 Helianthus annuus HOM05D006267 ORTHO05D007490 7.3e-52 209.5 665 32.3
Potri.001G098500 Populus trichocarpa HOM05D006267 ORTHO05D007490 1.3e-51 208.8 647 32.6
CsaV3_4G006140 Cucumis sativus L. HOM05D006267 ORTHO05D007490 1.6e-51 208.4 659 34.6
PGR042G1146 Punica granatum HOM05D006267 ORTHO05D007490 2.8e-51 207.6 657 32.3
Sc01g0009910 Simmondsia chinensis HOM05D006267 ORTHO05D007490 4.8e-51 206.8 687 29.4
Lj4g0011337 Lotus japonicus HOM05D006267 ORTHO05D007490 6.2e-51 206.5 682 32.3
Sed0011828 Sechium edule HOM05D006267 ORTHO05D007490 6.2e-51 206.5 602 33.6
Manes.02G016400 Manihot esculenta HOM05D006267 ORTHO05D007490 8.1e-51 206.1 532 34.8
FAN13G1859 Fragaria x ananassa HOM05D006267 ORTHO05D007490 3.1e-50 204.1 651 33.0
CARHR046900 Cardamine hirsuta HOM05D006267 ORTHO05D007490 4.0e-50 203.8 687 31.4
Lalb_Chr05g0224451 Lupinus albus HOM05D006267 ORTHO05D007490 9.0e-50 202.6 671 30.8
TAR375G0718 Trochodendron aralioides HOM05D006267 ORTHO05D007490 9.9e-49 199.1 320 39.4
CANSAT21G1484 Cannabis sativa HOM05D006267 ORTHO05D007490 1.7e-48 198.4 679 32.5
Lalb_Chr09g0333071 Lupinus albus HOM05D006267 ORTHO05D007490 1.7e-48 198.4 657 31.1
Ca_10954_v3 Cicer arietinum L. HOM05D006267 ORTHO05D007490 2.2e-48 198.0 666 31.1
Hund14261 Selenicereus undatus HOM05D006267 ORTHO05D007490 2.2e-48 198.0 681 32.6
MELO3C016335.2 Cucumis melo HOM05D006267 ORTHO05D007490 3.8e-48 197.2 593 34.6
vmacro13979 Vaccinium macrocarpon HOM05D006267 ORTHO05D007490 6.4e-48 196.4 702 30.9
Medtr8g098995 Medicago truncatula HOM05D006267 ORTHO05D007490 1.1e-47 195.7 593 31.0
FAN13G1356 Fragaria x ananassa HOM05D006267 ORTHO05D007490 3.2e-47 194.1 651 32.9
VMungo1215G1298 Vigna mungo HOM05D006267 ORTHO05D007490 4.6e-46 190.3 553 32.9
Psat7g029320 Pisum sativum HOM05D006267 ORTHO05D007490 6.0e-46 189.9 585 32.1
THA.LOC104817764 Tarenaya hassleriana HOM05D006267 ORTHO05D007490 7.9e-46 189.5 675 31.4
TPR.G12935 Trifolium pratense HOM05D006267 ORTHO05D007490 3.0e-45 187.6 662 29.2
AL2G11010 Arabidopsis lyrata HOM05D006267 ORTHO05D007490 1.1e-44 185.7 587 32.5
Eucgr.E00783 Eucalyptus grandis HOM05D006267 ORTHO05D007490 2.5e-44 184.5 628 32.3
TWI81G0535 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 1.6e-43 181.8 418 35.6
Carub.0002s0075 Capsella rubella HOM05D006267 ORTHO05D007490 2.1e-43 181.4 588 31.5
Sed0002932 Sechium edule HOM05D006267 ORTHO05D007490 2.4e-42 177.9 518 35.1
AT1G64050 Arabidopsis thaliana HOM05D006267 ORTHO05D007490 4.0e-42 177.2 573 32.3
Potri.003G133100 Populus trichocarpa HOM05D006267 ORTHO05D007490 6.9e-42 176.4 574 31.0
Sabra01G0073800 Salix brachista HOM05D006267 ORTHO05D007490 9.0e-42 176.0 648 30.2
C09p18210 Brassica napus HOM05D006267 ORTHO05D007490 1.5e-41 175.3 520 33.7
Sp2g00660 Schrenkiella parvula HOM05D006267 ORTHO05D007490 1.5e-41 175.3 523 32.5
Thhalv10023327m.g Eutrema salsugineum HOM05D006267 ORTHO05D007490 2.6e-41 174.5 638 30.9
BcaB07g31428 Brassica carinata HOM05D006267 ORTHO05D007490 4.5e-41 173.7 551 33.2
Duzib068G0865 Durio zibethinus HOM05D006267 ORTHO05D007490 9.9e-41 172.6 662 31.4
TWI60G1512 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 1.3e-40 172.2 408 34.3
BcaC04g22526 Brassica carinata HOM05D006267 ORTHO05D007490 2.2e-40 171.4 518 34.2
BolC9t54717H Brassica oleracea HOM05D006267 ORTHO05D007490 2.2e-40 171.4 520 33.5
TWI15G0222 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 2.2e-40 171.4 385 34.8
Hund11430 Selenicereus undatus HOM05D006267 ORTHO05D007490 8.4e-40 169.5 743 29.6
Haze_08744 Corylus avellana HOM05D006267 ORTHO05D007490 1.0e-37 162.5 355 37.7
Aqoxy7G00177 Aquilegia oxysepala HOM05D006267 ORTHO05D007490 1.3e-37 162.2 598 30.9
Aa31LG2G1120 Aethionema arabicum HOM05D006267 ORTHO05D007490 1.8e-37 161.8 531 31.1
A09p15090 Brassica napus HOM05D006267 ORTHO05D007490 2.3e-37 161.4 544 32.5
BraA09t37153Z Brassica rapa HOM05D006267 ORTHO05D007490 3.0e-37 161.0 542 33.2
Phvul.002G160500 Phaseolus vulgaris HOM05D006267 ORTHO05D007490 3.9e-37 160.6 568 30.1
Sabra03G0095400 Salix brachista HOM05D006267 ORTHO05D007490 2.8e-35 154.5 663 29.9
MBI04_g06288_MAGBIO Magnolia biondii HOM05D006267 ORTHO05D007490 2.6e-33 147.9 356 35.1
PSO063G3925 Papaver somniferum HOM05D006267 ORTHO05D007490 2.2e-32 144.8 347 33.4
PSO170G4156 Papaver somniferum HOM05D006267 ORTHO05D007490 2.2e-32 144.8 348 33.9
unitig_52.g17233 Utricularia gibba HOM05D006267 ORTHO05D007490 6.7e-29 133.3 394 32.2
HanXRQChr06g0166231 Helianthus annuus HOM05D006267 ORTHO05D007490 1.1e-20 105.9 237 35.4
HPP92_003940 Vanilla planifolia HOM05D006267 ORTHO05D007490 1.9e-20 105.1 442 25.1
ATR0188G022 Amborella trichopoda HOM05D006267 ORTHO05D007490 9.0e-18 96.3 276 29.7
Zm00001eb237760 Zea mays HOM05D006267 ORTHO05D007490 7.7e-17 93.2 401 28.4
SHI07081 Sapria himalayana HOM05D006267 ORTHO05D007490 6.1e-14 83.6 220 32.3
Hma1.2p1_0377F.1_g139590 Hydrangea macrophylla HOM05D006267 ORTHO05D007490 1.4e-10 72.4 153 36.6
SEGI_39127 Sequoiadendron giganteum HOM05D006267 ORTHO05D007490 7.7e-09 66.6 252 22.2


User provided reference genes

Program Settings