Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen12g026640 Solanum pennellii HOM05D007248 ORTHO05D002765 7.3e-133 477.2 245 100.0
Sopen05g006380 Solanum pennellii HOM05D000017 ORTHO05D000013 7.4e-85 317.8 170 95.3
Sopen06g004330 Solanum pennellii HOM05D000017 ORTHO05D000013 2.8e-84 315.8 170 94.7
Sopen03g024940 Solanum pennellii HOM05D006864 ORTHO05D002765 1.8e-83 313.2 168 93.5
Sopen10g005080 Solanum pennellii HOM05D000017 ORTHO05D000013 3.1e-83 312.4 170 92.4
Sopen02g001070 Solanum pennellii HOM05D000017 ORTHO05D000013 4.1e-83 312.0 170 92.4
Sopen02g032130 Solanum pennellii HOM05D000629 ORTHO05D000013 4.1e-83 312.0 170 92.4
Sopen12g019990 Solanum pennellii HOM05D000017 ORTHO05D000013 4.1e-83 312.0 170 92.4
Sopen06g002940 Solanum pennellii HOM05D000017 ORTHO05D000013 1.5e-82 310.1 170 91.8
Sopen10g022230 Solanum pennellii HOM05D000017 ORTHO05D000013 1.1e-80 303.9 170 90.6
Sopen09g007640 Solanum pennellii HOM05D000017 ORTHO05D000013 2.7e-79 299.3 171 90.6
Sopen11g019130 Solanum pennellii HOM05D000047 ORTHO05D000589 2.7e-63 246.1 152 82.9
Sopen02g012130 Solanum pennellii HOM05D000017 ORTHO05D000013 7.7e-58 228.0 170 74.1
Sopen01g037270 Solanum pennellii HOM05D000017 ORTHO05D000013 1.0e-49 201.1 170 58.8
Sopen11g029160 Solanum pennellii HOM05D000017 ORTHO05D000013 1.0e-49 201.1 170 58.8
Sopen06g004080 Solanum pennellii HOM05D000017 ORTHO05D000013 1.9e-48 196.8 170 57.1
Sopen04g019350 Solanum pennellii HOM05D006864 ORTHO05D000013 2.1e-47 193.4 161 58.4
Sopen03g030620 Solanum pennellii HOM05D000017 ORTHO05D000013 3.0e-46 189.5 170 56.5
Sopen09g012340 Solanum pennellii HOM05D006864 ORTHO05D000013 1.5e-45 187.2 170 55.9
Sopen05g013600 Solanum pennellii HOM05D000017 ORTHO05D000013 1.7e-41 173.7 103 83.5
Sopen08g017470 Solanum pennellii HOM05D000017 ORTHO05D000013 4.7e-31 139.0 126 54.8
Sopen10g008530 Solanum pennellii HOM05D000017 ORTHO05D000013 3.5e-26 122.9 91 65.9
VMungo0329G0006 Vigna mungo HOM05D010604 ORTHO05D012476 6.2e-23 112.1 60 88.3
Nitab4.5_0007029g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.4e-21 106.3 98 49.0
Nitab4.5_0007005g0050 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.3e-20 104.4 139 41.7
Nitab4.5_0004917g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 4.9e-20 102.4 155 40.6
Nitab4.5_0006628g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 6.4e-20 102.1 158 38.0
PGSC0003DMG400009287 Solanum tuberosum HOM05D006864 ORTHO05D002765 1.1e-19 101.3 137 37.2
Nitab4.5_0006248g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.4e-19 100.9 98 45.9
Sopen04g034640 Solanum pennellii HOM05D000017 ORTHO05D002765 4.1e-19 99.4 53 94.3
Nitab4.5_0000721g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 9.2e-19 98.2 97 47.4
Nitab4.5_0001816g0240 Nicotiana tabacum HOM05D007248 ORTHO05D002765 4.6e-18 95.9 98 44.9
Sopen07g019800 Solanum pennellii HOM05D000017 ORTHO05D000013 1.0e-17 94.7 97 49.5
Nitab4.5_0000423g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.3e-17 94.4 158 35.4
Nitab4.5_0003767g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.0e-17 93.2 158 34.8
Nitab4.5_0001968g0150 Nicotiana tabacum HOM05D007248 ORTHO05D002765 5.1e-17 92.4 165 35.8
Sopen05g009360 Solanum pennellii HOM05D000017 ORTHO05D002765 1.5e-16 90.9 62 79.0
Nitab4.5_0020188g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.5e-16 90.1 98 43.9
Nitab4.5_0000516g0080 Nicotiana tabacum HOM05D007248 ORTHO05D002765 4.3e-16 89.4 174 35.1
Nitab4.5_0002373g0160 Nicotiana tabacum HOM05D007248 ORTHO05D002765 7.3e-16 88.6 175 34.9
Nitab4.5_0000814g0120 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.6e-15 86.3 139 38.8
Sopen07g021550 Solanum pennellii HOM05D000017 ORTHO05D000013 2.4e-14 83.6 78 61.5
Nitab4.5_0006179g0060 Nicotiana tabacum HOM05D007248 ORTHO05D002765 4.0e-14 82.8 87 46.0
Nitab4.5_0008791g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 4.0e-14 82.8 155 34.8
Nitab4.5_0002993g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.0e-13 80.5 155 34.8
Solyc10g052716.1 Solanum lycopersicum HOM05D000017 ORTHO05D002765 5.8e-13 79.0 100 33.0
Sopen10g023510 Solanum pennellii HOM05D000017 ORTHO05D000013 7.6e-13 78.6 100 32.0
Nitab4.5_0000425g0150 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.3e-12 77.8 98 40.8
Nitab4.5_0004728g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.3e-12 77.8 118 29.7
Nitab4.5_0009921g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.7e-12 77.4 102 34.3
Nitab4.5_0002461g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.8e-12 76.3 210 28.1
Sopen05g022560 Solanum pennellii HOM05D000017 ORTHO05D000013 8.4e-12 75.1 93 33.3
Peaxi162Scf00106g02222 Petunia axillaris HOM05D006864 ORTHO05D002765 1.4e-11 74.3 138 28.3
Peaxi162Scf00184g00211 Petunia axillaris HOM05D006864 ORTHO05D002765 1.4e-11 74.3 138 28.3
Solyc09g150133.1 Solanum lycopersicum HOM05D007248 ORTHO05D002765 1.4e-11 74.3 93 33.3
Solyc10g047821.1 Solanum lycopersicum HOM05D007248 ORTHO05D002765 1.9e-11 73.9 93 33.3
Peaxi162Scf00164g01221 Petunia axillaris HOM05D006864 ORTHO05D002765 3.2e-11 73.2 138 28.3
Nitab4.5_0008359g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.2e-11 72.8 98 33.7
SGA_v2.0_scaffold1G00045 Striga asiatica HOM05D010396 ORTHO05D002765 4.2e-11 72.8 116 36.2
Nitab4.5_0000374g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 9.3e-11 71.6 157 26.8
Nitab4.5_0006009g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.2e-10 71.2 181 26.5
Nitab4.5_0011890g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.2e-10 71.2 81 43.2
Nitab4.5_0024513g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.2e-10 71.2 97 41.2
Nitab4.5_0004449g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.1e-10 70.5 73 45.2
Nitab4.5_0000036g0400 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.6e-10 69.3 92 34.8
SGA_v2.0_scaffold10G05133 Striga asiatica HOM05D015252 ORTHO05D002765 4.6e-10 69.3 110 31.8
Nitab4.5_0000829g0130 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.0e-10 68.9 93 35.5
Peaxi162Scf01226g00018 Petunia axillaris HOM05D006864 ORTHO05D000013 1.0e-09 68.2 99 32.3
Nitab4.5_0001863g0150 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.3e-09 67.8 92 33.7
Nitab4.5_0003674g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.3e-09 67.8 143 30.1
Nitab4.5_0001030g0050 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.7e-09 67.4 81 39.5
Nitab4.5_0002279g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.7e-09 67.4 92 33.7
Nitab4.5_0002951g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.9e-09 66.2 168 24.4
Nitab4.5_0013596g0040 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.1e-09 65.9 92 33.7
DCAR_015925 Daucus carota HOM05D006864 ORTHO05D002765 8.7e-09 65.1 134 26.9
Nitab4.5_0000584g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.5e-08 64.3 92 32.6
Nitab4.5_0027852g0010 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.5e-08 64.3 191 27.7
Peaxi162Scf00006g03314 Petunia axillaris HOM05D006864 ORTHO05D002765 1.5e-08 64.3 99 33.3
CAN.G1124.2 Capsicum annuum HOM05D006962 ORTHO05D008696 1.9e-08 63.9 132 27.3
Nitab4.5_0001173g0060 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.9e-08 63.9 92 32.6
Nitab4.5_0000036g0340 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.3e-08 63.2 74 41.9
Oeu009472.1 Olea europaea HOM05D012404 ORTHO05D002765 4.3e-08 62.8 95 31.6
Nitab4.5_0003887g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.6e-08 62.4 92 32.6
Nitab4.5_0005474g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.6e-08 62.4 101 30.7
Nitab4.5_0004510g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 7.3e-08 62.0 74 43.2
Nitab4.5_0007303g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 7.3e-08 62.0 92 32.6
Oeu043717.1 Olea europaea HOM05D012404 ORTHO05D002765 7.3e-08 62.0 128 27.3
Oeu059246.1 Olea europaea HOM05D012404 ORTHO05D002765 7.3e-08 62.0 128 26.6
Nitab4.5_0000786g0280 Nicotiana tabacum HOM05D006864 ORTHO05D002765 9.6e-08 61.6 92 32.6
Nitab4.5_0001062g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 9.6e-08 61.6 96 33.3
Nitab4.5_0003911g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 9.6e-08 61.6 92 31.5
Oeu019782.1 Olea europaea HOM05D012404 ORTHO05D002765 9.6e-08 61.6 95 31.6
Oeu063037.1 Olea europaea HOM05D012404 ORTHO05D002765 2.1e-07 60.5 92 30.4
Nitab4.5_0000890g0220 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.8e-07 60.1 179 25.7
Nitab4.5_0007069g0020 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.8e-07 60.1 95 33.7
Nitab4.5_0012915g0010 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.8e-07 60.1 95 33.7
Oeu002184.1 Olea europaea HOM05D012404 ORTHO05D002765 2.8e-07 60.1 92 29.3
Oeu053795.1 Olea europaea HOM05D012404 ORTHO05D002765 2.8e-07 60.1 85 30.6
CANSAT78G2408 Cannabis sativa HOM05D000017 ORTHO05D000013 3.6e-07 59.7 168 25.0
Oeu016698.1 Olea europaea HOM05D000017 ORTHO05D000013 3.6e-07 59.7 135 28.9
Nitab4.5_0004824g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.8e-07 59.3 91 34.1
Nitab4.5_0000697g0250 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.2e-07 58.9 92 30.4
Nitab4.5_0001212g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.2e-07 58.9 96 31.2
Nitab4.5_0001947g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.2e-07 58.9 173 27.2
Nitab4.5_0005199g0100 Nicotiana tabacum HOM05D006864 ORTHO05D000013 6.2e-07 58.9 106 30.2
Oeu038186.1 Olea europaea HOM05D012404 ORTHO05D002765 6.2e-07 58.9 95 31.6
Nitab4.5_0000832g0070 Nicotiana tabacum HOM05D008401 ORTHO05D002765 8.1e-07 58.5 169 23.7
CANSAT21G0992 Cannabis sativa HOM05D010396 ORTHO05D002765 1.1e-06 58.2 131 25.2
CANSAT78G0321 Cannabis sativa HOM05D010396 ORTHO05D002765 1.1e-06 58.2 130 25.4
Nitab4.5_0003114g0100 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.1e-06 58.2 165 26.1
Nitab4.5_0004770g0070 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.1e-06 58.2 95 33.7
Nitab4.5_0011275g0040 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.1e-06 58.2 92 32.6
Oeu034871.1 Olea europaea HOM05D000017 ORTHO05D000013 1.1e-06 58.2 73 39.7
CANSAT56G0158 Cannabis sativa HOM05D000003 ORTHO05D000004 1.4e-06 57.8 94 25.5
CANSAT78G0529 Cannabis sativa HOM05D010396 ORTHO05D002765 1.4e-06 57.8 131 25.2
Nitab4.5_0001591g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.4e-06 57.8 95 32.6
Nitab4.5_0003586g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.4e-06 57.8 96 31.2
Nitab4.5_0000425g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.8e-06 57.4 92 30.4
Nitab4.5_0003966g0040 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.8e-06 57.4 185 23.2
Nitab4.5_0001140g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.1e-06 56.6 64 45.3
CANSAT54G1694 Cannabis sativa HOM05D000017 ORTHO05D000013 4.0e-06 56.2 100 25.0
Nitab4.5_0002430g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 5.3e-06 55.8 147 27.9
CANSAT11G2629 Cannabis sativa HOM05D000017 ORTHO05D000013 6.9e-06 55.5 100 25.0
CANSAT25G1793 Cannabis sativa HOM05D000017 ORTHO05D000013 9.0e-06 55.1 119 29.4
Nitab4.5_0000403g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 9.0e-06 55.1 129 29.5


User provided reference genes

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