Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen12g026610 Solanum pennellii HOM05D003617 ORTHO05D010478 1.7e-93 345.9 161 100.0
PGSC0003DMG400045242 Solanum tuberosum HOM05D003617 ORTHO05D010478 2.4e-68 262.3 153 80.4
PGSC0003DMG400042344 Solanum tuberosum HOM05D000995 ORTHO05D010478 2.8e-64 248.8 153 77.1
PGSC0003DMG400039284 Solanum tuberosum HOM05D003617 ORTHO05D010478 4.4e-62 241.5 153 75.8
Sopen11g010720 Solanum pennellii HOM05D003617 ORTHO05D007165 1.0e-58 230.3 153 73.2
PGSC0003DMG400046252 Solanum tuberosum HOM05D000995 ORTHO05D010478 1.5e-57 226.5 154 74.7
PGSC0003DMG400023003 Solanum tuberosum HOM05D000995 ORTHO05D000638 4.8e-56 221.5 125 82.4
CAN.G1445.3 Capsicum annuum HOM05D003617 ORTHO05D010478 1.6e-51 206.5 151 64.9
PGSC0003DMG400012065 Solanum tuberosum HOM05D003617 ORTHO05D010478 1.1e-49 200.3 123 77.2
Sopen05g012010 Solanum pennellii HOM05D000002 ORTHO05D010478 5.3e-47 191.4 127 73.2
Nitab4.5_0000109g0010 Nicotiana tabacum HOM05D000995 ORTHO05D010478 2.6e-46 189.1 155 60.6
PGSC0003DMG400044879 Solanum tuberosum HOM05D000995 ORTHO05D001773 1.7e-45 186.4 114 78.9
Sopen06g006570 Solanum pennellii HOM05D000995 ORTHO05D002620 9.3e-44 180.6 148 60.8
PGSC0003DMG400042314 Solanum tuberosum HOM05D003617 ORTHO05D007165 4.3e-41 171.8 109 76.1
PGSC0003DMG400044625 Solanum tuberosum HOM05D003617 ORTHO05D010478 1.1e-39 167.2 119 68.1
Sopen05g021300 Solanum pennellii HOM05D000995 ORTHO05D012246 5.8e-38 161.4 123 66.7
Nitab4.5_0004315g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 7.6e-38 161.0 149 56.4
PGSC0003DMG400035791 Solanum tuberosum HOM05D000995 ORTHO05D000638 6.7e-34 147.9 94 76.6
PGSC0003DMG400043386 Solanum tuberosum HOM05D003617 ORTHO05D010478 7.4e-33 144.4 92 75.0
PGSC0003DMG400044334 Solanum tuberosum HOM05D003617 ORTHO05D010478 9.7e-33 144.1 127 56.7
PGSC0003DMG400015099 Solanum tuberosum HOM05D000995 ORTHO05D007165 2.8e-32 142.5 154 47.4
CAN.G1329.39 Capsicum annuum HOM05D003617 ORTHO05D010478 3.7e-32 142.1 118 58.5
CAN.G1658.3 Capsicum annuum HOM05D003617 ORTHO05D010478 1.8e-31 139.8 116 62.1
PGSC0003DMG400034797 Solanum tuberosum HOM05D000995 ORTHO05D010478 4.1e-31 138.7 154 46.1
Peaxi162Scf00466g00012 Petunia axillaris HOM05D003617 ORTHO05D007165 6.9e-31 137.9 152 45.4
CAN.G908.5 Capsicum annuum HOM05D003617 ORTHO05D010478 2.0e-30 136.3 110 61.8
CAN.G735.4 Capsicum annuum HOM05D003617 ORTHO05D010478 2.2e-29 132.9 115 57.4
Sopen07g020760 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-28 129.8 86 72.1
CAN.G108.23 Capsicum annuum HOM05D003617 ORTHO05D010478 2.5e-28 129.4 116 56.0
CAN.G1323.7 Capsicum annuum HOM05D003617 ORTHO05D010478 3.2e-28 129.0 92 68.5
CAN.G626.3 Capsicum annuum HOM05D003617 ORTHO05D010478 3.2e-28 129.0 98 63.3
Sopen01g028500 Solanum pennellii HOM05D003617 ORTHO05D000001 4.2e-28 128.6 118 55.9
Sopen02g010350 Solanum pennellii HOM05D003617 ORTHO05D010478 4.2e-28 128.6 110 62.7
CAN.G275.8 Capsicum annuum HOM05D003617 ORTHO05D010478 6.1e-27 124.8 108 59.3
CAN.G67.13 Capsicum annuum HOM05D003617 ORTHO05D010478 6.1e-27 124.8 113 55.8
CAN.G626.1 Capsicum annuum HOM05D003617 ORTHO05D010478 7.9e-27 124.4 107 57.0
CAN.G135.3 Capsicum annuum HOM05D003617 ORTHO05D010478 1.3e-26 123.6 100 58.0
Nitab4.5_0001101g0020 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.3e-26 123.6 155 44.5
PGSC0003DMG400040544 Solanum tuberosum HOM05D003617 ORTHO05D007165 5.1e-26 121.7 71 78.9
Nitab4.5_0000423g0050 Nicotiana tabacum HOM05D003617 ORTHO05D010478 3.3e-25 119.0 120 53.3
Nitab4.5_0001586g0180 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.4e-23 113.6 98 58.2
PGSC0003DMG400003176 Solanum tuberosum HOM05D003617 ORTHO05D010478 1.8e-23 113.2 127 45.7
Nitab4.5_0017311g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.5e-22 110.2 96 59.4
Nitab4.5_0000300g0220 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.9e-22 108.2 87 64.4
Nitab4.5_0024231g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.0e-21 107.5 96 57.3
Nitab4.5_0003882g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.3e-21 107.1 96 57.3
PGSC0003DMG400007485 Solanum tuberosum HOM05D000995 ORTHO05D001773 1.3e-21 107.1 75 70.7
Nitab4.5_0022154g0010 Nicotiana tabacum HOM05D000995 ORTHO05D000638 2.2e-21 106.3 88 61.4
Nitab4.5_0002555g0010 Nicotiana tabacum HOM05D003617 ORTHO05D010478 2.9e-21 105.9 96 57.3
Nitab4.5_0022539g0020 Nicotiana tabacum HOM05D003617 ORTHO05D010478 2.9e-21 105.9 94 57.4
Nitab4.5_0006184g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 8.5e-21 104.4 87 62.1
Nitab4.5_0000836g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.1e-20 104.0 87 60.9
Nitab4.5_0005533g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.9e-20 103.2 97 55.7
Nitab4.5_0001995g0050 Nicotiana tabacum HOM05D003617 ORTHO05D010478 4.2e-20 102.1 114 49.1
Nitab4.5_0003317g0020 Nicotiana tabacum HOM05D003617 ORTHO05D010478 4.2e-20 102.1 88 60.2
Nitab4.5_0005492g0060 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.2e-20 102.1 87 58.6
Nitab4.5_0003317g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.2e-19 100.5 91 57.1
PGSC0003DMG400036228 Solanum tuberosum HOM05D000995 ORTHO05D001773 2.7e-19 99.4 95 48.4
Nitab4.5_0008204g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 4.7e-19 98.6 91 57.1
Nitab4.5_0022539g0010 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.0e-18 97.4 110 52.7
Nitab4.5_0001081g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 3.9e-18 95.5 85 56.5
PGSC0003DMG400018021 Solanum tuberosum HOM05D000995 ORTHO05D010478 3.9e-18 95.5 92 48.9
Nitab4.5_0000419g0120 Nicotiana tabacum HOM05D003617 ORTHO05D010478 6.7e-18 94.7 84 58.3
Nitab4.5_0002671g0080 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.1e-17 94.0 96 54.2
CAN.G587.67 Capsicum annuum HOM05D003617 ORTHO05D010478 5.7e-17 91.7 76 56.6
Nitab4.5_0004914g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.3e-16 90.5 96 52.1
Nitab4.5_0000048g0120 Nicotiana tabacum HOM05D003617 ORTHO05D010478 4.8e-16 88.6 96 50.0
Nitab4.5_0004188g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.1e-15 87.4 87 51.7
Nitab4.5_0000263g0210 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.8e-15 86.7 84 53.6
Rhsim02G0098200 Rhododendron simsii HOM05D000995 ORTHO05D002620 1.8e-15 86.7 129 38.8
QL11p006726 Quercus lobata HOM05D000995 ORTHO05D001773 2.4e-15 86.3 160 35.0
Nitab4.5_0000481g0030 Nicotiana tabacum HOM05D003617 ORTHO05D010478 3.1e-15 85.9 95 46.3
Rhsim01G0099100 Rhododendron simsii HOM05D000995 ORTHO05D001773 9.1e-15 84.3 129 38.0
Rhsim01G0104900 Rhododendron simsii HOM05D000995 ORTHO05D001773 9.1e-15 84.3 131 37.4
Nitab4.5_0000095g0090 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.2e-14 84.0 93 46.2
Rhsim13G0131600 Rhododendron simsii HOM05D000995 ORTHO05D002620 1.2e-14 84.0 129 38.0
Nitab4.5_0011017g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.0e-14 83.2 75 56.0
Rhsim01G0078000 Rhododendron simsii HOM05D000995 ORTHO05D001773 3.4e-14 82.4 129 37.2
CAN.G1525.6 Capsicum annuum HOM05D000995 ORTHO05D007165 4.5e-14 82.0 152 32.2
Rhsim08G0106900 Rhododendron simsii HOM05D000995 ORTHO05D002620 4.5e-14 82.0 129 38.0
Nitab4.5_0005517g0050 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.3e-13 80.5 67 56.7
QL07p006782 Quercus lobata HOM05D000995 ORTHO05D002620 1.3e-13 80.5 147 34.7
Sopen10g011360 Solanum pennellii HOM05D000995 ORTHO05D010407 1.3e-13 80.5 79 46.8
CAN.G34.10 Capsicum annuum HOM05D003617 ORTHO05D010478 1.4e-12 77.0 112 42.0
QL02p003670 Quercus lobata HOM05D000995 ORTHO05D001773 1.9e-12 76.6 147 34.0
QL02p080036 Quercus lobata HOM05D000995 ORTHO05D001773 1.9e-12 76.6 147 33.3
QL05p048948 Quercus lobata HOM05D000995 ORTHO05D001773 1.9e-12 76.6 147 33.3
QL06p019608 Quercus lobata HOM05D000995 ORTHO05D001773 1.9e-12 76.6 147 33.3
QL07p017318 Quercus lobata HOM05D000995 ORTHO05D001773 1.9e-12 76.6 147 34.0
QL08p038287 Quercus lobata HOM05D000995 ORTHO05D001773 1.9e-12 76.6 147 33.3
QL93p0181_0012 Quercus lobata HOM05D000995 ORTHO05D001773 1.9e-12 76.6 147 33.3
QL93p0209_0006 Quercus lobata HOM05D000995 ORTHO05D001773 1.9e-12 76.6 147 33.3
Nitab4.5_0003674g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 3.2e-12 75.9 95 42.1
QL08p015694 Quercus lobata HOM05D000995 ORTHO05D001773 3.2e-12 75.9 149 32.2
Nitab4.5_0000004g0300 Nicotiana tabacum HOM05D003617 ORTHO05D007165 9.4e-12 74.3 75 50.7
Nitab4.5_0004591g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 9.4e-12 74.3 80 52.5
Solyc09g018215.1 Solanum lycopersicum HOM05D000995 ORTHO05D000638 4.7e-11 72.0 59 52.5
Peaxi162Scf00883g00081 Petunia axillaris HOM05D003617 ORTHO05D007165 6.1e-11 71.6 100 38.0
PGSC0003DMG400039982 Solanum tuberosum HOM05D007844 ORTHO05D017132 8.0e-11 71.2 83 45.8
PGSC0003DMG400045313 Solanum tuberosum HOM05D003617 ORTHO05D007165 8.0e-11 71.2 54 53.7
Nitab4.5_0002397g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.0e-10 70.9 69 50.7
Rhsim05G0140400 Rhododendron simsii HOM05D000995 ORTHO05D001773 1.0e-10 70.9 129 33.3
Nitab4.5_0000199g0110 Nicotiana tabacum HOM05D000995 ORTHO05D010997 2.3e-10 69.7 129 33.3
RhsimUnG0218100 Rhododendron simsii HOM05D000995 ORTHO05D001773 2.3e-10 69.7 139 30.9
Peaxi162Scf00991g00012 Petunia axillaris HOM05D003617 ORTHO05D007165 3.0e-10 69.3 75 44.0
Rhsim05G0112600 Rhododendron simsii HOM05D000995 ORTHO05D001773 3.0e-10 69.3 129 32.6
CAN.G370.37 Capsicum annuum HOM05D003617 ORTHO05D010478 3.9e-10 68.9 102 42.2
Nitab4.5_0001868g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.9e-10 68.9 141 31.2
Rhsim03G0094500 Rhododendron simsii HOM05D000995 ORTHO05D000638 6.7e-10 68.2 141 31.9
CAN.G68.7 Capsicum annuum HOM05D003617 ORTHO05D010478 1.1e-09 67.4 91 42.9
Nitab4.5_0000045g0140 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.5e-09 67.0 84 46.4
MSTRG.26045 Avicennia marina HOM05D000995 ORTHO05D000638 2.6e-09 66.2 156 26.3
CAN.G108.56 Capsicum annuum HOM05D003617 ORTHO05D010478 2.6e-09 66.2 91 40.7
Nitab4.5_0000621g0100 Nicotiana tabacum HOM05D003574 ORTHO05D010997 2.6e-09 66.2 134 33.6
PGSC0003DMG400009586 Solanum tuberosum HOM05D000995 ORTHO05D000638 2.6e-09 66.2 126 29.4
CAN.G1362.2 Capsicum annuum HOM05D003617 ORTHO05D010478 3.3e-09 65.9 85 44.7
Nitab4.5_0008368g0050 Nicotiana tabacum HOM05D003574 ORTHO05D001773 3.3e-09 65.9 129 32.6
Nitab4.5_0000032g0300 Nicotiana tabacum HOM05D000995 ORTHO05D010997 4.4e-09 65.5 127 31.5
Nitab4.5_0001939g0070 Nicotiana tabacum HOM05D003617 ORTHO05D010478 4.4e-09 65.5 69 47.8
FvH4_4g22273 Fragaria vesca HOM05D000995 ORTHO05D002620 5.7e-09 65.1 131 32.8
Peaxi162Scf00148g00142 Petunia axillaris HOM05D003617 ORTHO05D007165 5.7e-09 65.1 75 42.7
FvH4_4g15164 Fragaria vesca HOM05D000995 ORTHO05D002620 1.3e-08 63.9 146 28.8
Sopen09g010940 Solanum pennellii HOM05D003617 ORTHO05D007165 2.8e-08 62.8 141 30.5
PGSC0003DMG400038482 Solanum tuberosum HOM05D000995 ORTHO05D000638 4.8e-08 62.0 125 33.6
Peaxi162Scf00104g00615 Petunia axillaris HOM05D003617 ORTHO05D007165 8.2e-08 61.2 99 35.4
PGSC0003DMG400018974 Solanum tuberosum HOM05D000995 ORTHO05D001773 8.2e-08 61.2 121 31.4
PGSC0003DMG400001285 Solanum tuberosum HOM05D000995 ORTHO05D000638 1.1e-07 60.8 121 32.2
Nitab4.5_0000078g0230 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.8e-07 60.1 97 39.2
CAN.G624.18 Capsicum annuum HOM05D000995 ORTHO05D000638 2.4e-07 59.7 43 53.5
QL05p018402 Quercus lobata HOM05D000995 ORTHO05D001773 2.4e-07 59.7 54 46.3
FAN21G1141 Fragaria x ananassa HOM05D000995 ORTHO05D002620 3.1e-07 59.3 108 33.3
Hund02727 Selenicereus undatus HOM05D007953 ORTHO05D009936 4.1e-07 58.9 156 32.1
Hund29669 Selenicereus undatus HOM05D007953 ORTHO05D009936 4.1e-07 58.9 156 32.1
Hund26237 Selenicereus undatus HOM05D007953 ORTHO05D009936 5.3e-07 58.5 156 30.8
CAN.G229.21 Capsicum annuum HOM05D000310 ORTHO05D000509 7.0e-07 58.2 134 27.6
FAN15G3418 Fragaria x ananassa HOM05D000995 ORTHO05D002620 7.0e-07 58.2 109 33.9
QL03p037625 Quercus lobata HOM05D000995 ORTHO05D001773 9.1e-07 57.8 141 29.1
PGSC0003DMG400031332 Solanum tuberosum HOM05D000995 ORTHO05D001773 9.1e-07 57.8 43 53.5
Nitab4.5_0000481g0130 Nicotiana tabacum HOM05D000995 ORTHO05D010997 1.2e-06 57.4 69 39.1
Sopen05g008570 Solanum pennellii HOM05D003574 ORTHO05D002175 1.2e-06 57.4 121 31.4
PGSC0003DMG400013728 Solanum tuberosum HOM05D000995 ORTHO05D001773 1.2e-06 57.4 130 29.2
FAN03G3450 Fragaria x ananassa HOM05D000995 ORTHO05D002620 1.6e-06 57.0 116 31.9
FAN08G0912 Fragaria x ananassa HOM05D000995 ORTHO05D002620 1.6e-06 57.0 107 32.7
CAN.G41.3 Capsicum annuum HOM05D003617 ORTHO05D010478 2.0e-06 56.6 68 47.1
FAN23G1277 Fragaria x ananassa HOM05D000995 ORTHO05D002620 2.0e-06 56.6 108 31.5
Nitab4.5_0000022g0410 Nicotiana tabacum HOM05D000995 ORTHO05D001773 2.0e-06 56.6 43 46.5
FAN17G0116 Fragaria x ananassa HOM05D000995 ORTHO05D002620 3.5e-06 55.8 109 33.0
Solyc04g048905.1 Solanum lycopersicum HOM05D000995 ORTHO05D001773 3.5e-06 55.8 91 35.2
Nitab4.5_0007010g0010 Nicotiana tabacum HOM05D003574 ORTHO05D010997 4.5e-06 55.5 127 29.1
QL10p026410 Quercus lobata HOM05D000995 ORTHO05D001773 4.5e-06 55.5 128 30.5
Rhsim08G0105700 Rhododendron simsii HOM05D000995 ORTHO05D000001 4.5e-06 55.5 120 29.2
Hund21297 Selenicereus undatus HOM05D008217 ORTHO05D010406 4.5e-06 55.5 151 30.5
Hund22959 Selenicereus undatus HOM05D008217 ORTHO05D010406 4.5e-06 55.5 151 29.8
ClCG08G000680 Citrullus lanatus HOM05D000995 ORTHO05D001773 5.9e-06 55.1 140 25.7
Hund03430 Selenicereus undatus HOM05D008217 ORTHO05D010406 5.9e-06 55.1 151 29.8
PGSC0003DMG400040325 Solanum tuberosum HOM05D000995 ORTHO05D001773 5.9e-06 55.1 121 28.9


User provided reference genes

Program Settings