Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen12g025910 Solanum pennellii HOM05D001396 ORTHO05D000493 6.4e-111 404.1 200 100.0
Solyc08g005320.3 Solanum lycopersicum HOM05D001396 ORTHO05D000493 8.8e-76 287.3 150 97.3
PGSC0003DMG400001866 Solanum tuberosum HOM05D001396 ORTHO05D000493 8.2e-58 227.6 153 79.1
Solyc08g077340.2 Solanum lycopersicum HOM05D001396 ORTHO05D000493 1.6e-56 223.4 153 77.1
Sopen08g025920 Solanum pennellii HOM05D001396 ORTHO05D000493 5.9e-56 221.5 153 76.5
PGSC0003DMG400018499 Solanum tuberosum HOM05D001396 ORTHO05D000493 4.8e-50 201.8 152 73.0
PGSC0003DMG400005853 Solanum tuberosum HOM05D001396 ORTHO05D000493 4.9e-42 175.3 156 60.3
Nitab4.5_0003152g0010 Nicotiana tabacum HOM05D001396 ORTHO05D000493 1.4e-41 173.7 155 60.0
PGSC0003DMG400018500 Solanum tuberosum HOM05D001396 ORTHO05D000493 1.8e-41 173.3 158 62.0
Nitab4.5_0001770g0180 Nicotiana tabacum HOM05D001396 ORTHO05D000493 2.0e-40 169.9 153 62.1
Peaxi162Scf00842g00421 Petunia axillaris HOM05D001396 ORTHO05D000493 1.0e-39 167.5 157 59.2
Nitab4.5_0001770g0010 Nicotiana tabacum HOM05D001396 ORTHO05D000493 6.6e-39 164.9 153 58.2
Peaxi162Scf00842g00433 Petunia axillaris HOM05D001396 ORTHO05D000493 1.1e-38 164.1 157 58.0
Nitab4.5_0001770g0080 Nicotiana tabacum HOM05D001396 ORTHO05D000493 1.5e-38 163.7 152 60.5
Sopen08g001410 Solanum pennellii HOM05D001396 ORTHO05D000493 1.5e-38 163.7 142 66.9
Peaxi162Scf00009g02910 Petunia axillaris HOM05D001396 ORTHO05D000493 2.5e-38 162.9 155 57.4
Peaxi162Scf00045g00449 Petunia axillaris HOM05D001396 ORTHO05D000493 3.3e-38 162.5 153 61.4
Nitab4.5_0001770g0190 Nicotiana tabacum HOM05D001396 ORTHO05D000493 4.3e-38 162.2 154 57.1
Peaxi162Scf00842g00434 Petunia axillaris HOM05D001396 ORTHO05D000493 5.6e-38 161.8 153 58.8
Nitab4.5_0001770g0090 Nicotiana tabacum HOM05D001396 ORTHO05D000493 9.5e-38 161.0 158 57.0
Nitab4.5_0000258g0080 Nicotiana tabacum HOM05D001396 ORTHO05D000493 2.8e-37 159.5 147 61.2
Solyc08g005370.2 Solanum lycopersicum HOM05D001396 ORTHO05D000493 4.7e-37 158.7 142 66.2
Peaxi162Scf00066g01621 Petunia axillaris HOM05D001396 ORTHO05D000493 6.1e-37 158.3 155 58.7
Peaxi162Scf00045g00458 Petunia axillaris HOM05D001396 ORTHO05D000493 5.2e-36 155.2 158 57.0
Nitab4.5_0003980g0030 Nicotiana tabacum HOM05D001396 ORTHO05D000493 8.9e-36 154.5 158 56.3
Peaxi162Scf00650g00312 Petunia axillaris HOM05D001396 ORTHO05D000493 2.0e-35 153.3 156 53.2
CAN.G137.23 Capsicum annuum HOM05D004678 ORTHO05D000493 2.6e-35 152.9 152 59.9
Nitab4.5_0003152g0140 Nicotiana tabacum HOM05D001396 ORTHO05D000493 7.5e-35 151.4 155 57.4
Nitab4.5_0001402g0140 Nicotiana tabacum HOM05D001396 ORTHO05D000493 9.8e-35 151.0 152 55.9
Nitab4.5_0001770g0110 Nicotiana tabacum HOM05D001396 ORTHO05D000493 6.4e-34 148.3 157 55.4
Nitab4.5_0003152g0060 Nicotiana tabacum HOM05D001396 ORTHO05D000493 1.8e-33 146.7 162 54.9
Peaxi162Scf00650g00355 Petunia axillaris HOM05D001396 ORTHO05D000493 9.2e-33 144.4 154 49.4
CAN.G346.6 Capsicum annuum HOM05D001396 ORTHO05D000493 1.2e-32 144.1 141 57.4
Peaxi162Scf00253g00227 Petunia axillaris HOM05D001396 ORTHO05D000493 3.5e-32 142.5 153 55.6
Solyc08g015715.1 Solanum lycopersicum HOM05D001396 ORTHO05D000493 4.6e-32 142.1 157 52.2
Peaxi162Scf00650g00340 Petunia axillaris HOM05D001396 ORTHO05D000493 2.3e-31 139.8 157 52.2
Peaxi162Scf00650g00352 Petunia axillaris HOM05D001396 ORTHO05D000493 6.6e-31 138.3 157 52.2
Solyc08g015710.2 Solanum lycopersicum HOM05D001396 ORTHO05D000493 1.1e-30 137.5 169 48.5
PGSC0003DMG400006279 Solanum tuberosum HOM05D001396 ORTHO05D000493 1.9e-30 136.7 157 52.2
Peaxi162Scf00650g00350 Petunia axillaris HOM05D001396 ORTHO05D000493 2.5e-30 136.3 163 50.9
Peaxi162Scf01385g00035 Petunia axillaris HOM05D001396 ORTHO05D000493 2.5e-30 136.3 157 50.3
Peaxi162Scf01415g00033 Petunia axillaris HOM05D001396 ORTHO05D000493 9.5e-30 134.4 137 56.9
Peaxi162Scf00119g01220 Petunia axillaris HOM05D001396 ORTHO05D000493 2.8e-29 132.9 177 46.3
Sopen08g004620 Solanum pennellii HOM05D001396 ORTHO05D000493 2.8e-29 132.9 134 56.0
Peaxi162Scf00438g00826 Petunia axillaris HOM05D001396 ORTHO05D000493 6.2e-29 131.7 162 47.5
PGSC0003DMG400018498 Solanum tuberosum HOM05D001396 ORTHO05D000493 8.0e-29 131.3 158 51.9
Peaxi162Scf00253g00220 Petunia axillaris HOM05D001396 ORTHO05D000493 2.3e-28 129.8 195 45.6
Peaxi162Scf00650g00334 Petunia axillaris HOM05D001396 ORTHO05D000493 4.0e-28 129.0 165 47.3
PGSC0003DMG400013717 Solanum tuberosum HOM05D001396 ORTHO05D000493 6.8e-28 128.3 135 53.3
Nitab4.5_0000319g0310 Nicotiana tabacum HOM05D001396 ORTHO05D000493 7.5e-27 124.8 156 50.6
Peaxi162Scf00650g00335 Petunia axillaris HOM05D001396 ORTHO05D000493 1.7e-26 123.6 164 47.0
Nitab4.5_0001770g0100 Nicotiana tabacum HOM05D001396 ORTHO05D000493 2.4e-25 119.8 206 41.7
Peaxi162Scf00650g00351 Petunia axillaris HOM05D001396 ORTHO05D000493 3.2e-25 119.4 157 48.4
Solyc08g005333.1 Solanum lycopersicum HOM05D001396 ORTHO05D000493 7.0e-25 118.2 158 47.5
Sopen08g005890 Solanum pennellii HOM05D001396 ORTHO05D000493 1.1e-22 110.9 135 48.1
Sopen08g001340 Solanum pennellii HOM05D001396 ORTHO05D000493 1.9e-22 110.2 125 49.6
Solyc08g005310.4 Solanum lycopersicum HOM05D000833 ORTHO05D000969 4.3e-22 109.0 125 48.8
Solyc08g005330.2 Solanum lycopersicum HOM05D001396 ORTHO05D000493 4.3e-22 109.0 124 52.4
Sopen08g005920 Solanum pennellii HOM05D001396 ORTHO05D000493 7.3e-22 108.2 135 45.9
PGSC0003DMG400013716 Solanum tuberosum HOM05D001396 ORTHO05D000493 7.3e-22 108.2 96 62.5
Solyc08g015900.1 Solanum lycopersicum HOM05D001396 ORTHO05D000493 1.2e-21 107.5 113 52.2
Sopen08g001360 Solanum pennellii HOM05D001396 ORTHO05D000493 3.6e-21 105.9 124 50.8
Solyc08g015905.1 Solanum lycopersicum HOM05D001396 ORTHO05D000493 1.4e-20 104.0 142 45.8
Solyc08g015730.3 Solanum lycopersicum HOM05D001396 ORTHO05D000493 1.8e-20 103.6 135 45.9
Nitab4.5_0003152g0110 Nicotiana tabacum HOM05D001396 ORTHO05D000493 4.0e-20 102.4 94 60.6
Peaxi162Scf00353g00617 Petunia axillaris HOM05D001396 ORTHO05D000493 8.9e-20 101.3 137 49.6
PGSC0003DMG401006305 Solanum tuberosum HOM05D001396 ORTHO05D000493 3.7e-18 95.9 85 60.0
Peaxi162Scf00650g00037 Petunia axillaris HOM05D001396 ORTHO05D000493 1.0e-15 87.8 107 50.5
Sopen08g001400 Solanum pennellii HOM05D001396 ORTHO05D000493 3.0e-15 86.3 52 80.8
Solyc08g015930.1 Solanum lycopersicum HOM05D001396 ORTHO05D000493 5.1e-15 85.5 86 53.5
Nitab4.5_0003980g0010 Nicotiana tabacum HOM05D001396 ORTHO05D000493 8.6e-15 84.7 133 45.1
Solyc08g005337.1 Solanum lycopersicum HOM05D001396 ORTHO05D000493 1.9e-14 83.6 51 80.4
Hma1.2p1_2867F.1_g329620 Hydrangea macrophylla HOM05D001396 ORTHO05D000493 3.6e-13 79.3 168 36.9
CAN.G137.24 Capsicum annuum HOM05D001396 ORTHO05D000493 6.2e-13 78.6 77 58.4
Nitab4.5_0001770g0020 Nicotiana tabacum HOM05D001396 ORTHO05D000493 4.0e-12 75.9 78 52.6
Dinv40489 Davidia involucrata HOM05D001396 ORTHO05D000493 8.9e-12 74.7 173 31.8
CSS0005659 Camellia sinensis var. sinensis HOM05D001396 ORTHO05D000493 1.2e-11 74.3 167 34.1
TAR624G0459 Trochodendron aralioides HOM05D001396 ORTHO05D000493 1.2e-11 74.3 162 35.2
Dinv18998 Davidia involucrata HOM05D001396 ORTHO05D000493 1.5e-11 73.9 165 34.5
TAR624G0204 Trochodendron aralioides HOM05D001396 ORTHO05D000493 5.8e-11 72.0 164 31.7
Potri.001G322900 Populus trichocarpa HOM05D001396 ORTHO05D000493 9.9e-11 71.2 187 32.1
CSS0035376 Camellia sinensis var. sinensis HOM05D001396 ORTHO05D000493 1.3e-10 70.9 167 32.9
CAN.G346.1 Capsicum annuum HOM05D001396 ORTHO05D000493 2.2e-10 70.1 112 42.9
Dinv40493 Davidia involucrata HOM05D001396 ORTHO05D000493 2.2e-10 70.1 162 35.8
Solyc08g015880.1 Solanum lycopersicum HOM05D001396 ORTHO05D000493 2.9e-10 69.7 56 66.1
TAR624G1446 Trochodendron aralioides HOM05D001396 ORTHO05D000493 2.9e-10 69.7 164 33.5
TAR624G0688 Trochodendron aralioides HOM05D001396 ORTHO05D000493 3.8e-10 69.3 151 36.4
CAN.G582.9 Capsicum annuum HOM05D001396 ORTHO05D000493 4.9e-10 68.9 49 65.3
Dinv39820 Davidia involucrata HOM05D001396 ORTHO05D000493 4.9e-10 68.9 165 33.9
QL04p018599 Quercus lobata HOM05D001396 ORTHO05D000493 4.9e-10 68.9 171 29.8
Dinv39824 Davidia involucrata HOM05D001396 ORTHO05D000493 6.4e-10 68.6 166 32.5
Nitab4.5_0003980g0090 Nicotiana tabacum HOM05D001396 ORTHO05D000493 6.4e-10 68.6 75 49.3
QL04p018347 Quercus lobata HOM05D001396 ORTHO05D000493 8.4e-10 68.2 156 34.0
QL04p018450 Quercus lobata HOM05D001396 ORTHO05D000493 8.4e-10 68.2 170 30.6
MBI14_g25912_MAGBIO Magnolia biondii HOM05D001396 ORTHO05D000493 1.1e-09 67.8 174 34.5
Hma1.2p1_0144F.1_g064650 Hydrangea macrophylla HOM05D001396 ORTHO05D000493 1.4e-09 67.4 165 33.9
SGA_v2.0_scaffold3G01569 Striga asiatica HOM05D001396 ORTHO05D000493 1.9e-09 67.0 151 28.5
SGA_v2.0_scaffold835G53654 Striga asiatica HOM05D001396 ORTHO05D000493 1.9e-09 67.0 151 28.5
GSVIVG01003199001 Vitis vinifera HOM05D001396 ORTHO05D000493 1.9e-09 67.0 167 31.1
Dinv18996 Davidia involucrata HOM05D001396 ORTHO05D000493 3.2e-09 66.2 166 31.3
Dinv39823 Davidia involucrata HOM05D001396 ORTHO05D000493 9.2e-09 64.7 155 33.5
QL04p018553 Quercus lobata HOM05D001396 ORTHO05D000493 9.2e-09 64.7 176 27.8
Rhsim13G0172800 Rhododendron simsii HOM05D001396 ORTHO05D000493 1.2e-08 64.3 162 32.7
CAN.G424.3 Capsicum annuum HOM05D001396 ORTHO05D000493 1.6e-08 63.9 161 31.1
SGA_v2.0_scaffold3G01573 Striga asiatica HOM05D001396 ORTHO05D000493 2.1e-08 63.5 151 27.8
CSS0040115 Camellia sinensis var. sinensis HOM05D001396 ORTHO05D000493 2.7e-08 63.2 166 29.5
Dinv18995 Davidia involucrata HOM05D001396 ORTHO05D000493 2.7e-08 63.2 153 34.0
CAN.G424.8 Capsicum annuum HOM05D001396 ORTHO05D000493 6.0e-08 62.0 170 30.0
QL03p053101 Quercus lobata HOM05D001396 ORTHO05D000493 6.0e-08 62.0 171 31.0
QL05p081980 Quercus lobata HOM05D001396 ORTHO05D000493 6.0e-08 62.0 171 31.0
Dinv39826 Davidia involucrata HOM05D001396 ORTHO05D000493 7.8e-08 61.6 166 34.3
Nitab4.5_0003152g0100 Nicotiana tabacum HOM05D001396 ORTHO05D000493 1.0e-07 61.2 87 44.8
Rhsim06G0150600 Rhododendron simsii HOM05D001396 ORTHO05D000493 1.0e-07 61.2 160 33.8
Sopen08g005830 Solanum pennellii HOM05D001396 ORTHO05D000001 1.3e-07 60.8 69 50.7
Dinv40491 Davidia involucrata HOM05D001396 ORTHO05D000493 1.7e-07 60.5 169 32.0
Rhsim06G0150800 Rhododendron simsii HOM05D001396 ORTHO05D000493 1.7e-07 60.5 152 31.6
Nitab4.5_0002580g0050 Nicotiana tabacum HOM05D005268 ORTHO05D000493 2.3e-07 60.1 175 31.4
QL04p018567 Quercus lobata HOM05D001396 ORTHO05D000493 3.0e-07 59.7 171 29.8
CAN.G424.2 Capsicum annuum HOM05D001396 ORTHO05D000493 5.1e-07 58.9 158 29.7
Nitab4.5_0001915g0040 Nicotiana tabacum HOM05D005268 ORTHO05D000493 6.6e-07 58.5 189 27.5
Nitab4.5_0003152g0180 Nicotiana tabacum HOM05D001396 ORTHO05D000493 6.6e-07 58.5 51 60.8
Nitab4.5_0003574g0060 Nicotiana tabacum HOM05D001396 ORTHO05D000493 6.6e-07 58.5 164 29.9
vmacro03815 Vaccinium macrocarpon HOM05D001396 ORTHO05D000493 6.6e-07 58.5 190 33.2
CAN.G1834.6 Capsicum annuum HOM05D001396 ORTHO05D000493 8.7e-07 58.2 142 28.2
Peaxi162Scf00009g00285 Petunia axillaris HOM05D001396 ORTHO05D000493 8.7e-07 58.2 111 42.3
TAR624G0037 Trochodendron aralioides HOM05D001396 ORTHO05D000493 8.7e-07 58.2 167 29.9
Dinv39821 Davidia involucrata HOM05D001396 ORTHO05D000493 1.9e-06 57.0 131 35.9
Eucgr.C03091 Eucalyptus grandis HOM05D001396 ORTHO05D000493 1.9e-06 57.0 142 31.0
Nitab4.5_0001770g0150 Nicotiana tabacum HOM05D001396 ORTHO05D000493 1.9e-06 57.0 55 56.4
Hund23611 Selenicereus undatus HOM05D001396 ORTHO05D000493 1.9e-06 57.0 170 31.8
Sopen08g005850 Solanum pennellii HOM05D001396 ORTHO05D000001 1.9e-06 57.0 71 46.5
Nitab4.5_0000190g0130 Nicotiana tabacum HOM05D001396 ORTHO05D000493 5.6e-06 55.5 163 28.2
Nitab4.5_0001915g0030 Nicotiana tabacum HOM05D005268 ORTHO05D000493 5.6e-06 55.5 188 31.4
Peaxi162Scf00638g00417 Petunia axillaris HOM05D001396 ORTHO05D000493 5.6e-06 55.5 67 53.7
Nn1g06755 Nelumbo nucifera HOM05D001396 ORTHO05D000493 9.6e-06 54.7 128 33.6
Nitab4.5_0001770g0200 Nicotiana tabacum HOM05D001396 ORTHO05D000493 9.6e-06 54.7 37 64.9


User provided reference genes

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