Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen12g025630 Solanum pennellii HOM05D007106 ORTHO05D007770 6.0e-39 163.7 82 100.0
Sopen06g004820 Solanum pennellii HOM05D007106 ORTHO05D007770 1.1e-35 152.9 82 95.1
Solyc07g150120.1 Solanum lycopersicum HOM05D007106 ORTHO05D007770 3.1e-35 151.4 82 90.2
PGSC0003DMG400019989 Solanum tuberosum HOM05D007106 ORTHO05D007770 4.2e-32 141.0 82 86.6
Nitab4.5_0000121g0170 Nicotiana tabacum HOM05D007106 ORTHO05D007770 8.1e-20 100.1 82 63.4
Nitab4.5_0008269g0020 Nicotiana tabacum HOM05D007106 ORTHO05D007770 1.4e-19 99.4 80 63.8
Peaxi162Scf01256g00221 Petunia axillaris HOM05D007106 ORTHO05D007770 2.6e-18 95.1 82 64.6
Solyc12g062690.2 Solanum lycopersicum HOM05D007106 ORTHO05D007770 4.3e-13 77.8 44 84.1
Actinidia37624 Actinidia chinensis HOM05D007106 ORTHO05D007770 3.1e-11 71.6 75 50.7
Actinidia19038 Actinidia chinensis HOM05D007106 ORTHO05D007770 1.2e-10 69.7 78 53.8
CSS0012235 Camellia sinensis var. sinensis HOM05D007106 ORTHO05D007770 1.5e-10 69.3 80 53.8
CSS0040002 Camellia sinensis var. sinensis HOM05D007106 ORTHO05D007770 1.5e-10 69.3 80 53.8
Hma1.2p1_1936F.1_g308220 Hydrangea macrophylla HOM05D007106 ORTHO05D007770 3.4e-10 68.2 79 49.4
Hma1.2p1_2516F.1_g323695 Hydrangea macrophylla HOM05D007106 ORTHO05D007770 3.4e-10 68.2 79 49.4
Cc04_g16540 Coffea canephora HOM05D007106 ORTHO05D007770 6.5e-09 63.9 78 46.2
Nitab4.5_0006000g0100 Nicotiana tabacum HOM05D007106 ORTHO05D007770 8.4e-09 63.5 78 51.3
Peaxi162Scf00274g00521 Petunia axillaris HOM05D007106 ORTHO05D007770 1.1e-08 63.2 79 50.6
Oeu047292.1 Olea europaea HOM05D007106 ORTHO05D007770 1.4e-08 62.8 77 46.8
Gohir.A03G067200 Gossypium hirsutum HOM05D007106 ORTHO05D007770 1.9e-08 62.4 81 40.7
Gorai.003G097700 Gossypium raimondii HOM05D007106 ORTHO05D007770 1.9e-08 62.4 81 40.7
QL10p017125 Quercus lobata HOM05D007106 ORTHO05D007770 1.9e-08 62.4 77 44.2
Dinv38719 Davidia involucrata HOM05D007106 ORTHO05D007770 2.5e-08 62.0 79 45.6
Duzib205G0867 Durio zibethinus HOM05D007106 ORTHO05D007770 3.2e-08 61.6 82 42.7
Actinidia35002 Actinidia chinensis HOM05D007106 ORTHO05D007770 4.2e-08 61.2 75 44.0
Gohir.D03G093700 Gossypium hirsutum HOM05D007106 ORTHO05D007770 5.5e-08 60.8 81 39.5
Rhsim12G0155900 Rhododendron simsii HOM05D007106 ORTHO05D007770 7.1e-08 60.5 77 46.8
Thecc.03G089800 Theobroma cacao HOM05D007106 ORTHO05D007770 9.3e-08 60.1 81 40.7
Actinidia04893 Actinidia chinensis HOM05D007106 ORTHO05D007770 2.7e-07 58.5 76 42.1
Cfa018934 Carpinus fangiana HOM05D007106 ORTHO05D007770 2.7e-07 58.5 84 40.5
MD06G1194400 Malus domestica HOM05D007106 ORTHO05D007770 2.7e-07 58.5 74 41.9
CiPaw.11G045300 Carya illinoinensis HOM05D007106 ORTHO05D007770 4.6e-07 57.8 82 40.2
MD14G1201500 Malus domestica HOM05D007106 ORTHO05D007770 4.6e-07 57.8 74 39.2
COL.COLO4_08636 Corchorus olitorius HOM05D007106 ORTHO05D007770 6.1e-07 57.4 74 41.9
Gohir.D07G070600 Gossypium hirsutum HOM05D007106 ORTHO05D007770 6.1e-07 57.4 75 48.0
Gorai.001G074500 Gossypium raimondii HOM05D007106 ORTHO05D007770 6.1e-07 57.4 75 48.0
Prupe.5G194500 Prunus persica HOM05D007106 ORTHO05D007770 6.1e-07 57.4 75 45.3
vmacro17537 Vaccinium macrocarpon HOM05D007106 ORTHO05D007770 7.9e-07 57.0 77 41.6
Dinv16657 Davidia involucrata HOM05D007106 ORTHO05D007770 1.0e-06 56.6 78 46.2
Psat4g050160 Pisum sativum HOM05D007106 ORTHO05D007770 1.3e-06 56.2 85 41.2
CiPaw.12G013000 Carya illinoinensis HOM05D007106 ORTHO05D007770 1.8e-06 55.8 84 42.9
Cc11_g12880 Coffea canephora HOM05D007106 ORTHO05D007770 1.8e-06 55.8 77 36.4
vmacro16544 Vaccinium macrocarpon HOM05D007106 ORTHO05D007770 1.8e-06 55.8 75 42.7
SalBow7G1857 Salvia bowleyana HOM05D007106 ORTHO05D007770 2.3e-06 55.5 75 45.3
TAR374G1315 Trochodendron aralioides HOM05D007106 ORTHO05D007770 2.3e-06 55.5 77 40.3
Ciclev10022899m.g Citrus clementina HOM05D007106 ORTHO05D007770 3.0e-06 55.1 78 46.2
Nitab4.5_0001128g0100 Nicotiana tabacum HOM05D007106 ORTHO05D007770 3.0e-06 55.1 78 46.2
PGSC0003DMG400019509 Solanum tuberosum HOM05D007106 ORTHO05D007770 3.0e-06 55.1 77 41.6
Medtr3g435530 Medicago truncatula HOM05D007106 ORTHO05D007770 3.9e-06 54.7 83 39.8
Solyc03g115950.3 Solanum lycopersicum HOM05D007106 ORTHO05D007770 3.9e-06 54.7 76 42.1
Gohir.A07G066100 Gossypium hirsutum HOM05D007106 ORTHO05D007770 5.1e-06 54.3 75 46.7
Psat5g199960 Pisum sativum HOM05D007106 ORTHO05D007770 5.1e-06 54.3 83 37.3
Manes.06G091700 Manihot esculenta HOM05D007106 ORTHO05D007770 8.7e-06 53.5 90 44.4
PGR083G1166 Punica granatum HOM05D007106 ORTHO05D007770 8.7e-06 53.5 79 41.8


User provided reference genes

Program Settings