Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen12g025620 Solanum pennellii HOM05D007930 ORTHO05D012342 2.7e-112 408.7 208 100.0
Sopen12g018140 Solanum pennellii HOM05D007930 ORTHO05D007166 4.2e-28 129.0 223 42.2
Sopen11g023140 Solanum pennellii HOM05D000107 ORTHO05D000062 2.1e-27 126.7 300 35.0
Sopen08g007420 Solanum pennellii HOM05D007930 ORTHO05D007166 5.3e-23 112.1 230 38.3
Sopen04g011930 Solanum pennellii HOM05D007930 ORTHO05D007166 3.5e-19 99.4 57 84.2
Sopen04g018890 Solanum pennellii HOM05D007930 ORTHO05D007166 3.9e-18 95.9 57 80.7
Sopen07g008330 Solanum pennellii HOM05D007930 ORTHO05D007166 3.9e-18 95.9 57 80.7
Sopen04g019100 Solanum pennellii HOM05D007930 ORTHO05D007166 1.5e-17 94.0 206 35.4
Sopen10g014360 Solanum pennellii HOM05D007930 ORTHO05D007166 1.9e-17 93.6 180 39.4
Sopen01g007980 Solanum pennellii HOM05D007930 ORTHO05D007166 2.1e-16 90.1 196 38.3
Sopen03g016440 Solanum pennellii HOM05D007930 ORTHO05D007166 2.1e-16 90.1 196 37.8
Sopen06g016400 Solanum pennellii HOM05D007930 ORTHO05D007166 4.8e-16 89.0 55 78.2
Sopen08g014940 Solanum pennellii HOM05D000004 ORTHO05D007166 6.2e-16 88.6 204 35.8
Sopen11g018950 Solanum pennellii HOM05D000107 ORTHO05D000062 1.1e-15 87.8 206 34.5
Sopen07g016830 Solanum pennellii HOM05D007930 ORTHO05D007166 1.4e-15 87.4 202 38.6
Sopen08g008350 Solanum pennellii HOM05D007930 ORTHO05D007166 2.4e-15 86.7 210 36.7
Sopen05g019850 Solanum pennellii HOM05D007930 ORTHO05D007166 4.0e-15 85.9 157 40.8
PGSC0003DMG400047214 Solanum tuberosum HOM05D000107 ORTHO05D012342 5.3e-15 85.5 47 85.1
Sopen02g002150 Solanum pennellii HOM05D000107 ORTHO05D000062 2.0e-14 83.6 189 36.5
PGSC0003DMG400038122 Solanum tuberosum HOM05D000107 ORTHO05D012342 2.6e-14 83.2 47 83.0
Sopen05g024480 Solanum pennellii HOM05D007930 ORTHO05D007166 7.6e-14 81.6 177 36.7
Sopen01g007990 Solanum pennellii HOM05D000107 ORTHO05D012342 1.3e-13 80.9 47 80.9
Sopen03g018530 Solanum pennellii HOM05D000004 ORTHO05D009932 1.3e-13 80.9 47 80.9
Sopen07g016840 Solanum pennellii HOM05D000107 ORTHO05D000062 1.3e-13 80.9 47 80.9
Sopen08g007430 Solanum pennellii HOM05D000107 ORTHO05D000062 1.3e-13 80.9 47 80.9
Sopen09g018620 Solanum pennellii HOM05D000107 ORTHO05D009932 1.3e-13 80.9 47 80.9
Sopen09g019850 Solanum pennellii HOM05D000107 ORTHO05D000062 1.3e-13 80.9 47 80.9
Sopen12g015800 Solanum pennellii HOM05D000107 ORTHO05D012342 1.7e-13 80.5 47 78.7
Sopen10g018630 Solanum pennellii HOM05D007930 ORTHO05D007166 2.9e-13 79.7 46 84.8
Sopen01g009930 Solanum pennellii HOM05D000107 ORTHO05D000062 3.8e-13 79.3 47 78.7
Sopen11g017060 Solanum pennellii HOM05D000107 ORTHO05D012342 3.8e-13 79.3 53 73.6
Sopen05g026070 Solanum pennellii HOM05D007930 ORTHO05D007166 4.9e-13 79.0 46 82.6
Sopen11g021510 Solanum pennellii HOM05D000004 ORTHO05D000002 6.4e-13 78.6 47 78.7
Sopen06g013750 Solanum pennellii HOM05D007930 ORTHO05D007166 1.4e-12 77.4 56 71.4
Sopen00g009310 Solanum pennellii HOM05D007930 ORTHO05D007166 3.2e-12 76.3 46 82.6
Sopen01g017910 Solanum pennellii HOM05D000107 ORTHO05D000062 3.2e-12 76.3 53 67.9
Sopen08g011060 Solanum pennellii HOM05D007930 ORTHO05D007166 3.2e-12 76.3 202 34.7
Sopen10g023130 Solanum pennellii HOM05D000107 ORTHO05D000062 3.2e-12 76.3 53 67.9
Sopen12g016210 Solanum pennellii HOM05D000107 ORTHO05D009932 3.2e-12 76.3 47 76.6
Sopen05g026080 Solanum pennellii HOM05D000107 ORTHO05D012342 5.4e-12 75.5 47 76.6
Sopen06g013740 Solanum pennellii HOM05D000004 ORTHO05D012342 7.1e-12 75.1 46 76.1
Sopen12g025990 Solanum pennellii HOM05D000004 ORTHO05D000002 9.3e-12 74.7 47 76.6
PGSC0003DMG400009722 Solanum tuberosum HOM05D007930 ORTHO05D007166 9.3e-12 74.7 46 78.3
Sopen01g016040 Solanum pennellii HOM05D000107 ORTHO05D012342 1.2e-11 74.3 47 74.5
Sopen06g007990 Solanum pennellii HOM05D000107 ORTHO05D012342 1.6e-11 73.9 47 70.2
Sopen10g014350 Solanum pennellii HOM05D000107 ORTHO05D000062 1.6e-11 73.9 47 76.6
Sopen01g007220 Solanum pennellii HOM05D000107 ORTHO05D012342 2.1e-11 73.6 47 74.5
Sopen01g016030 Solanum pennellii HOM05D000014 ORTHO05D000016 2.7e-11 73.2 46 78.3
Sopen11g021520 Solanum pennellii HOM05D007930 ORTHO05D007166 7.9e-11 71.6 202 33.2
Sopen04g011400 Solanum pennellii HOM05D000107 ORTHO05D000062 3.9e-10 69.3 96 44.8
Sopen01g016760 Solanum pennellii HOM05D000107 ORTHO05D012342 8.7e-10 68.2 47 68.1
Sopen10g011990 Solanum pennellii HOM05D000107 ORTHO05D000062 1.1e-09 67.8 47 66.0
PGSC0003DMG400046823 Solanum tuberosum HOM05D007930 ORTHO05D007166 2.5e-09 66.6 195 31.8
Lj1g0024910 Lotus japonicus HOM05D004615 ORTHO05D007166 3.3e-09 66.2 57 56.1
Sopen09g024560 Solanum pennellii HOM05D000107 ORTHO05D000062 3.3e-09 66.2 47 63.8
Sopen09g016590 Solanum pennellii HOM05D000107 ORTHO05D012342 4.3e-09 65.9 47 63.8
Sopen11g021650 Solanum pennellii HOM05D007930 ORTHO05D007166 4.3e-09 65.9 92 46.7
PGSC0003DMG400046730 Solanum tuberosum HOM05D000107 ORTHO05D012342 4.3e-09 65.9 53 60.4
Sopen10g009350 Solanum pennellii HOM05D007930 ORTHO05D007166 5.6e-09 65.5 46 69.6
PGSC0003DMG400035537 Solanum tuberosum HOM05D000107 ORTHO05D012342 9.6e-09 64.7 47 63.8
Sopen01g007080 Solanum pennellii HOM05D007930 ORTHO05D000062 1.3e-08 64.3 47 61.7
Sopen01g016770 Solanum pennellii HOM05D000107 ORTHO05D012342 1.3e-08 64.3 44 68.2
Sopen12g015810 Solanum pennellii HOM05D007930 ORTHO05D007166 1.6e-08 63.9 92 45.7
Lj2g0009854 Lotus japonicus HOM05D008859 ORTHO05D007166 2.1e-08 63.5 55 58.2
PGSC0003DMG400015044 Solanum tuberosum HOM05D000107 ORTHO05D012342 2.1e-08 63.5 45 71.1
Sopen03g014010 Solanum pennellii HOM05D000014 ORTHO05D000016 2.8e-08 63.2 92 44.6
Sopen12g016200 Solanum pennellii HOM05D007930 ORTHO05D007166 3.7e-08 62.8 67 52.2
PGSC0003DMG400043538 Solanum tuberosum HOM05D007930 ORTHO05D007166 3.7e-08 62.8 240 30.0
Lj4g0021021 Lotus japonicus HOM05D004615 ORTHO05D000385 1.4e-07 60.8 55 50.9
Sopen05g013740 Solanum pennellii HOM05D007930 ORTHO05D007166 1.4e-07 60.8 79 46.8
Sopen06g007740 Solanum pennellii HOM05D000107 ORTHO05D000062 4.0e-07 59.3 48 56.2
Sopen07g010680 Solanum pennellii HOM05D007930 ORTHO05D007166 5.3e-07 58.9 47 55.3
PGSC0003DMG400042791 Solanum tuberosum HOM05D000107 ORTHO05D012342 1.2e-06 57.8 47 59.6
PGSC0003DMG400043533 Solanum tuberosum HOM05D007930 ORTHO05D007166 1.2e-06 57.8 33 84.8
Sopen04g019050 Solanum pennellii HOM05D000004 ORTHO05D000002 1.5e-06 57.4 33 81.8
Sopen08g009350 Solanum pennellii HOM05D007930 ORTHO05D007166 2.6e-06 56.6 33 81.8
Psat0s2928g0040 Pisum sativum HOM05D009811 ORTHO05D007166 3.4e-06 56.2 65 52.3
Psat1g098040 Pisum sativum HOM05D009811 ORTHO05D007166 3.4e-06 56.2 65 52.3
Sopen03g013860 Solanum pennellii HOM05D000004 ORTHO05D007166 3.4e-06 56.2 33 81.8
Psat0s1330g0160 Pisum sativum HOM05D009811 ORTHO05D007166 4.5e-06 55.8 55 54.5
Psat7g246320 Pisum sativum HOM05D009811 ORTHO05D007166 4.5e-06 55.8 55 54.5
Sopen08g007710 Solanum pennellii HOM05D007930 ORTHO05D007166 4.5e-06 55.8 33 81.8
Sopen08g014730 Solanum pennellii HOM05D007930 ORTHO05D007166 5.8e-06 55.5 165 31.5
PGSC0003DMG400042482 Solanum tuberosum HOM05D007930 ORTHO05D007166 7.6e-06 55.1 51 51.0


User provided reference genes

Program Settings