Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen12g023760 Solanum pennellii HOM05D006979 ORTHO05D008857 3.8e-168 594.7 297 100.0
PGSC0003DMG400011606 Solanum tuberosum HOM05D006979 ORTHO05D008857 1.2e-158 563.1 296 95.3
Nitab4.5_0001199g0130 Nicotiana tabacum HOM05D006979 ORTHO05D008857 4.3e-135 485.0 300 82.7
Solyc12g049280.3 Solanum lycopersicum HOM05D006979 ORTHO05D008857 2.8e-134 482.3 248 98.8
CAN.G1368.7 Capsicum annuum HOM05D006979 ORTHO05D008857 8.0e-134 480.7 294 83.3
Nitab4.5_0000189g0250 Nicotiana tabacum HOM05D006979 ORTHO05D008857 1.8e-133 479.6 300 82.3
Peaxi162Scf00177g00513 Petunia axillaris HOM05D006979 ORTHO05D008857 4.4e-116 421.8 238 88.7
Migut.D00941 Erythranthe guttata HOM05D006979 ORTHO05D008857 1.1e-109 400.6 260 75.8
SGA_v2.0_scaffold4G02061 Striga asiatica HOM05D006979 ORTHO05D008857 5.2e-109 398.3 261 74.7
Rhsim08G0237900 Rhododendron simsii HOM05D006979 ORTHO05D008857 4.4e-108 395.2 263 73.0
Dinv04035 Davidia involucrata HOM05D006979 ORTHO05D008857 7.6e-108 394.4 249 78.3
Actinidia32181 Actinidia chinensis HOM05D006979 ORTHO05D008857 1.7e-107 393.3 263 74.9
TAR383G0452 Trochodendron aralioides HOM05D006979 ORTHO05D008857 4.9e-107 391.7 266 72.2
CSS0018635 Camellia sinensis var. sinensis HOM05D006979 ORTHO05D008857 1.2e-105 387.1 282 69.9
CSS0026622 Camellia sinensis var. sinensis HOM05D006979 ORTHO05D008857 2.7e-105 386.0 284 69.4
Oeu015481.1 Olea europaea HOM05D006979 ORTHO05D008857 3.5e-105 385.6 257 73.9
vmacro15023 Vaccinium macrocarpon HOM05D006979 ORTHO05D008857 1.5e-103 380.2 263 71.5
COL.COLO4_30769 Corchorus olitorius HOM05D006979 ORTHO05D008857 5.6e-103 378.3 296 63.5
Ciclev10026147m.g Citrus clementina HOM05D006979 ORTHO05D008857 1.6e-102 376.7 264 70.8
SalBow7G2243 Salvia bowleyana HOM05D006979 ORTHO05D008857 1.6e-102 376.7 263 71.5
Atru.chr1.3953 Acer truncatum HOM05D006979 ORTHO05D008857 3.6e-102 375.6 269 69.9
GSVIVG01016774001 Vitis vinifera HOM05D006979 ORTHO05D008857 8.1e-102 374.4 261 70.5
Manes.11G021300 Manihot esculenta HOM05D006979 ORTHO05D008857 1.5e-100 370.2 294 65.3
Thecc.06G118900 Theobroma cacao HOM05D006979 ORTHO05D008857 3.8e-99 365.5 262 67.9
Duzib235G1224 Durio zibethinus HOM05D006979 ORTHO05D008857 8.4e-99 364.4 263 69.2
Lsat_1_v5_gn_5_135940 Lactuca sativa HOM05D006979 ORTHO05D008857 8.4e-99 364.4 264 67.8
ECA234G1570 Erigeron canadensis HOM05D006979 ORTHO05D008857 3.2e-98 362.5 264 68.2
CANSAT56G2284 Cannabis sativa HOM05D006979 ORTHO05D008857 4.2e-98 362.1 257 68.5
Cfa003539 Carpinus fangiana HOM05D006979 ORTHO05D008857 5.4e-98 361.7 262 67.2
Potri.003G063800 Populus trichocarpa HOM05D006979 ORTHO05D008857 9.3e-98 360.9 267 68.2
Gohir.D05G142800 Gossypium hirsutum HOM05D006979 ORTHO05D008857 2.1e-97 359.8 264 67.8
Gorai.009G146700 Gossypium raimondii HOM05D006979 ORTHO05D008857 2.1e-97 359.8 264 67.8
FvH4_6g34590 Fragaria vesca HOM05D006979 ORTHO05D008857 2.7e-97 359.4 277 65.0
FAN09G4734 Fragaria x ananassa HOM05D006979 ORTHO05D008857 2.7e-97 359.4 277 65.0
CiPaw.01G219600 Carya illinoinensis HOM05D006979 ORTHO05D008857 7.8e-97 357.8 248 70.6
MD09G1184500 Malus domestica HOM05D006979 ORTHO05D008857 7.8e-97 357.8 266 65.4
unitig_8.g3563 Utricularia gibba HOM05D006979 ORTHO05D008857 7.8e-97 357.8 261 67.4
AUR62001490 Chenopodium quinoa HOM05D006979 ORTHO05D008857 1.3e-96 357.1 264 65.9
Sed0019772 Sechium edule HOM05D006979 ORTHO05D008857 3.0e-96 355.9 258 67.8
Prupe.3G042700 Prunus persica HOM05D006979 ORTHO05D008857 3.9e-96 355.5 266 65.0
AUR62009880 Chenopodium quinoa HOM05D006979 ORTHO05D008857 1.1e-95 354.0 265 66.0
Cpa.g.sc25.110 Carica papaya HOM05D006979 ORTHO05D008857 1.9e-95 353.2 265 69.1
RcHm_v2.0_Chr2g0145111 Rosa chinensis HOM05D006979 ORTHO05D008857 4.3e-95 352.1 278 63.7
Lj9A522T69 Lonicera japonica HOM05D006979 ORTHO05D008857 5.6e-95 351.7 245 71.8
Aqoxy5G02291 Aquilegia oxysepala HOM05D006979 ORTHO05D008857 7.3e-95 351.3 261 67.0
TWI31G0112 Tripterygium wilfordii HOM05D006979 ORTHO05D008857 9.6e-95 350.9 269 65.8
Glyma.07G036000 Glycine max HOM05D006979 ORTHO05D008857 1.3e-94 350.5 260 64.6
CsaV3_7G034520 Cucumis sativus L. HOM05D006979 ORTHO05D008857 2.8e-94 349.4 255 65.9
Lj3g0022239 Lotus japonicus HOM05D006979 ORTHO05D008857 4.8e-94 348.6 303 58.4
QL05p008051 Quercus lobata HOM05D006979 ORTHO05D008857 2.4e-93 346.3 318 56.9
Lalb_Chr04g0263421 Lupinus albus HOM05D006979 ORTHO05D008857 5.3e-93 345.1 261 65.5
TPR.G16442 Trifolium pratense HOM05D006979 ORTHO05D008857 1.2e-92 344.0 256 64.8
Sabra03G0037400 Salix brachista HOM05D006979 ORTHO05D008857 2.0e-92 343.2 300 59.3
Glyma.16G005300 Glycine max HOM05D006979 ORTHO05D008857 5.8e-92 341.7 255 64.3
Phvul.010G133500 Phaseolus vulgaris HOM05D006979 ORTHO05D008857 7.6e-92 341.3 255 64.7
THA.LOC104813956 Tarenaya hassleriana HOM05D006979 ORTHO05D008857 2.9e-91 339.3 268 64.2
Atru.chr1.3954 Acer truncatum HOM05D006979 ORTHO05D008857 8.4e-91 337.8 243 70.0
Eucgr.F03173 Eucalyptus grandis HOM05D006979 ORTHO05D008857 1.1e-90 337.4 274 62.0
Medtr8g019510 Medicago truncatula HOM05D006979 ORTHO05D008857 1.1e-90 337.4 256 64.5
Cc04_g01400 Coffea canephora HOM05D006979 ORTHO05D008857 2.4e-90 336.3 239 69.5
Hund05741 Selenicereus undatus HOM05D006979 ORTHO05D008857 7.1e-90 334.7 319 54.9
CDE05G0714 Ceratophyllum demersum HOM05D006979 ORTHO05D008857 7.9e-89 331.3 255 62.0
VMungo0331G0985 Vigna mungo HOM05D006979 ORTHO05D008857 3.0e-88 329.3 267 61.0
PSO210G5065 Papaver somniferum HOM05D006979 ORTHO05D008857 6.7e-88 328.2 261 64.4
FAN05G0457 Fragaria x ananassa HOM05D006979 ORTHO05D008857 8.7e-88 327.8 256 64.1
MBI19_g11849_MAGBIO Magnolia biondii HOM05D006979 ORTHO05D008857 2.5e-87 326.2 264 64.4
BcaNung07150 Brassica carinata HOM05D006979 ORTHO05D008857 3.7e-86 322.4 268 60.8
AL2G32310 Arabidopsis lyrata HOM05D006979 ORTHO05D008857 4.8e-86 322.0 284 58.8
ClCG09G000940 Citrullus lanatus HOM05D006979 ORTHO05D008857 6.2e-86 321.6 311 54.0
PSO210G4684 Papaver somniferum HOM05D006979 ORTHO05D008857 8.1e-86 321.2 264 63.3
Os03g0410700 Oryza sativa ssp. japonica HOM05D006979 ORTHO05D008857 1.1e-85 320.9 251 64.1
ATR0598G212 Amborella trichopoda HOM05D006979 ORTHO05D008857 1.8e-85 320.1 253 62.1
Carub.0002s1948 Capsella rubella HOM05D006979 ORTHO05D008857 4.0e-85 318.9 289 57.1
C06p46960 Brassica napus HOM05D006979 ORTHO05D008857 9.9e-84 314.3 270 59.3
BolC6t39737H Brassica oleracea HOM05D006979 ORTHO05D008857 9.9e-84 314.3 270 59.3
Sp5g27700 Schrenkiella parvula HOM05D006979 ORTHO05D008857 4.9e-83 312.0 261 59.8
Sc08g0005680 Simmondsia chinensis HOM05D006979 ORTHO05D008857 8.4e-83 311.2 266 57.5
BcaC08g46707 Brassica carinata HOM05D006979 ORTHO05D008857 1.1e-82 310.8 270 58.9
Thhalv10018914m.g Eutrema salsugineum HOM05D006979 ORTHO05D008857 6.0e-81 305.1 270 57.4
Gohir.A05G140600 Gossypium hirsutum HOM05D006979 ORTHO05D008857 6.0e-81 305.1 264 61.0
PGR119G0938 Punica granatum HOM05D006979 ORTHO05D008857 7.9e-81 304.7 268 59.7
A07p38800 Brassica napus HOM05D006979 ORTHO05D008857 1.0e-80 304.3 290 55.2
BraA07t31434Z Brassica rapa HOM05D006979 ORTHO05D008857 1.0e-80 304.3 290 55.2
Aa31LG4G3010 Aethionema arabicum HOM05D006979 ORTHO05D008857 1.1e-79 300.8 265 59.6
Haze_16022 Corylus avellana HOM05D006979 ORTHO05D008857 3.7e-78 295.8 262 58.0
arahy.Tifrunner.gnm1.ann1.4E7AR5 Arachis hypogaea HOM05D006979 ORTHO05D008857 3.0e-72 276.2 263 54.8
arahy.Tifrunner.gnm1.ann1.IV001U Arachis hypogaea HOM05D006979 ORTHO05D008857 2.5e-71 273.1 263 54.4
Nn6g35601 Nelumbo nucifera HOM05D006979 ORTHO05D008857 1.1e-69 267.7 264 54.9
AT1G72640 Arabidopsis thaliana HOM05D006979 ORTHO05D008857 5.9e-68 261.9 214 62.1
Ca_05018_v3 Cicer arietinum L. HOM05D006979 ORTHO05D008857 1.1e-66 257.7 193 64.2
Pp3c11_2100 Physcomitrium patens HOM05D006979 ORTHO05D008857 1.2e-65 254.2 250 51.2
Hma1.2p1_0496F.1_g166210 Hydrangea macrophylla HOM05D006979 ORTHO05D008857 2.1e-65 253.4 170 72.4
Psat4g183680 Pisum sativum HOM05D006979 ORTHO05D008857 4.6e-65 252.3 212 59.4
EL10Ac7g16405 Beta vulgaris HOM05D006979 ORTHO05D008857 2.8e-62 243.0 298 46.0
Zm00001eb019720 Zea mays HOM05D006979 ORTHO05D008857 3.1e-61 239.6 204 61.3
Hma1.2p1_0496F.1_g166200 Hydrangea macrophylla HOM05D006979 ORTHO05D008857 2.5e-58 229.9 209 60.8
CARHR065560 Cardamine hirsuta HOM05D006979 ORTHO05D008857 1.1e-55 221.1 181 59.1
AagrBONN_evm.TU.Sc2ySwM_362.1497 Anthoceros agrestis HOM05D006979 ORTHO05D008857 2.0e-55 220.3 203 55.2
MELO3C024358.2 Cucumis melo HOM05D006979 ORTHO05D008857 2.0e-52 210.3 153 66.7
SMO117G0249 Selaginella moellendorffii HOM05D006979 ORTHO05D008857 5.0e-51 205.7 252 41.7
FAN14G3231 Fragaria x ananassa HOM05D006979 ORTHO05D008857 9.4e-50 201.4 157 60.5
Ah.08g216750 Amaranthus hybridus HOM05D006979 ORTHO05D008857 7.5e-39 165.2 144 58.3
SEGI_25115 Sequoiadendron giganteum HOM05D006979 ORTHO05D008857 3.1e-37 159.8 128 58.6
Mapoly0030s0153 Marchantia polymorpha HOM05D006979 ORTHO05D008857 1.5e-34 151.0 146 52.7
Cre02.g095133 Chlamydomonas reinhardtii HOM05D006979 ORTHO05D008857 1.2e-20 104.8 252 31.3
CDE05G2075 Ceratophyllum demersum HOM05D006979 ORTHO05D008857 1.3e-19 101.3 188 33.5
MCO12G160 Micromonas commoda HOM05D006979 ORTHO05D008857 4.7e-17 92.8 279 30.1
Medtr8g019490 Medicago truncatula HOM05D006979 ORTHO05D008857 5.8e-15 85.9 94 47.9
PRCOL_00001479 Prasinoderma coloniale HOM05D006979 ORTHO05D008857 3.5e-12 76.6 239 29.3
RcHm_v2.0_Chr6g0307231 Rosa chinensis HOM05D006979 ORTHO05D008857 6.0e-12 75.9 56 58.9
RcHm_v2.0_Chr3g0497381 Rosa chinensis HOM05D006979 ORTHO05D008857 3.9e-11 73.2 56 58.9
Hund21967 Selenicereus undatus HOM05D006655 ORTHO05D007986 2.5e-10 70.5 304 25.0
CiPaw.14G115600 Carya illinoinensis HOM05D006655 ORTHO05D007986 4.3e-10 69.7 292 23.6
Cfa009833 Carpinus fangiana HOM05D006655 ORTHO05D007986 9.5e-10 68.6 303 23.4
MD03G1169200 Malus domestica HOM05D006655 ORTHO05D007986 9.5e-10 68.6 239 24.7
HPP92_025004 Vanilla planifolia HOM05D006655 ORTHO05D007986 1.2e-09 68.2 316 22.8
Pp3c18_4890 Physcomitrium patens HOM05D006655 ORTHO05D007986 2.1e-09 67.4 241 24.1
Lsat_1_v5_gn_1_77640 Lactuca sativa HOM05D006655 ORTHO05D007986 2.8e-09 67.0 243 25.9
SEGI_01007 Sequoiadendron giganteum HOM05D006655 ORTHO05D007986 2.8e-09 67.0 251 23.9
EL10Ac4g10174 Beta vulgaris HOM05D006655 ORTHO05D007986 3.6e-09 66.6 263 23.2
Cpa.g.sc84.14 Carica papaya HOM05D006655 ORTHO05D007986 3.6e-09 66.6 267 23.6
Thhalv10025684m.g Eutrema salsugineum HOM05D006655 ORTHO05D007986 3.6e-09 66.6 239 23.8
FvH4_3g28150 Fragaria vesca HOM05D006655 ORTHO05D007986 3.6e-09 66.6 239 24.7
FAN11G1204 Fragaria x ananassa HOM05D006655 ORTHO05D007986 3.6e-09 66.6 239 24.7
arahy.Tifrunner.gnm1.ann1.760I9C Arachis hypogaea HOM05D006655 ORTHO05D007986 6.2e-09 65.9 321 24.3
Dinv36200 Davidia involucrata HOM05D006655 ORTHO05D007986 6.2e-09 65.9 263 24.3
RcHm_v2.0_Chr5g0050831 Rosa chinensis HOM05D006655 ORTHO05D007986 6.2e-09 65.9 251 23.5
AL7G20510 Arabidopsis lyrata HOM05D006655 ORTHO05D007986 8.0e-09 65.5 256 23.4
AT4G31530 Arabidopsis thaliana HOM05D006655 ORTHO05D007986 8.0e-09 65.5 256 23.4
ClCG03G012910 Citrullus lanatus HOM05D006655 ORTHO05D007986 8.0e-09 65.5 294 23.5
Haze_23196 Corylus avellana HOM05D006655 ORTHO05D007986 8.0e-09 65.5 263 23.2
Duzib168G2063 Durio zibethinus HOM05D006655 ORTHO05D007986 8.0e-09 65.5 245 24.5
CARHR239410 Cardamine hirsuta HOM05D006655 ORTHO05D007986 1.1e-08 65.1 258 24.0
FAN16G3233 Fragaria x ananassa HOM05D006655 ORTHO05D007986 1.4e-08 64.7 239 24.3
AUR62000173 Chenopodium quinoa HOM05D006655 ORTHO05D007986 1.8e-08 64.3 243 25.1
AUR62039838 Chenopodium quinoa HOM05D006655 ORTHO05D007986 1.8e-08 64.3 243 25.1
Carub.0007s0904 Capsella rubella HOM05D006655 ORTHO05D007986 2.3e-08 63.9 269 24.5
Ciclev10015876m.g Citrus clementina HOM05D006655 ORTHO05D007986 2.3e-08 63.9 239 24.7
ECA248G0748 Erigeron canadensis HOM05D006655 ORTHO05D007986 2.3e-08 63.9 262 24.0
FAN21G0719 Fragaria x ananassa HOM05D006655 ORTHO05D007986 2.3e-08 63.9 239 24.3
Gohir.D09G107900 Gossypium hirsutum HOM05D006655 ORTHO05D007986 2.3e-08 63.9 245 23.7
Gorai.006G125600 Gossypium raimondii HOM05D006655 ORTHO05D007986 2.3e-08 63.9 245 23.7
MBI13_g19379_MAGBIO Magnolia biondii HOM05D006655 ORTHO05D007986 2.3e-08 63.9 239 24.7
Sp7g29360 Schrenkiella parvula HOM05D006655 ORTHO05D007986 2.3e-08 63.9 239 23.0
Thecc.09G243400 Theobroma cacao HOM05D006655 ORTHO05D007986 2.3e-08 63.9 245 24.5
GSVIVG01037232001 Vitis vinifera HOM05D006655 ORTHO05D007986 2.3e-08 63.9 245 24.1
BcaNung04132 Brassica carinata HOM05D006655 ORTHO05D007986 3.1e-08 63.5 263 23.6
C07p58710 Brassica napus HOM05D006655 ORTHO05D007986 3.1e-08 63.5 259 22.4
Cc01_g05880 Coffea canephora HOM05D006655 ORTHO05D007986 4.0e-08 63.2 260 23.1
MELO3C015152.2 Cucumis melo HOM05D006655 ORTHO05D007986 4.0e-08 63.2 256 24.2
MSTRG.18452 Avicennia marina HOM05D006655 ORTHO05D007986 6.8e-08 62.4 239 24.3
QL01p017764 Quercus lobata HOM05D006655 ORTHO05D007986 6.8e-08 62.4 248 23.4
Zm00001eb394530 Zea mays HOM05D006655 ORTHO05D007986 6.8e-08 62.4 239 23.4
Actinidia06937 Actinidia chinensis HOM05D006655 ORTHO05D007986 8.9e-08 62.0 263 22.8
AagrBONN_evm.TU.Sc2ySwM_228.2449 Anthoceros agrestis HOM05D006655 ORTHO05D007986 8.9e-08 62.0 240 25.0
CsaV3_1G043150 Cucumis sativus L. HOM05D006655 ORTHO05D007986 8.9e-08 62.0 263 23.2
HanXRQChr01g0023951 Helianthus annuus HOM05D006655 ORTHO05D007986 8.9e-08 62.0 239 23.4
Solyc01g008920.4 Solanum lycopersicum HOM05D006655 ORTHO05D007986 8.9e-08 62.0 239 24.3
Sopen01g004410 Solanum pennellii HOM05D006655 ORTHO05D007986 8.9e-08 62.0 239 24.3
Duzib170G0104 Durio zibethinus HOM05D006655 ORTHO05D007986 1.2e-07 61.6 242 24.0
Rhsim13G0216500 Rhododendron simsii HOM05D006655 ORTHO05D007986 1.2e-07 61.6 263 23.2
Sabra16G0154600 Salix brachista HOM05D006655 ORTHO05D007986 1.2e-07 61.6 224 24.6
A03p60830 Brassica napus HOM05D006655 ORTHO05D007986 2.0e-07 60.8 237 22.8
PSO339G6694 Papaver somniferum HOM05D006655 ORTHO05D007986 2.6e-07 60.5 255 23.5
VMungo0331G0819 Vigna mungo HOM05D006655 ORTHO05D007986 2.6e-07 60.5 272 23.2
Atru.chr3.2616 Acer truncatum HOM05D006655 ORTHO05D007986 3.4e-07 60.1 234 23.1
BolC7t46320H Brassica oleracea HOM05D006655 ORTHO05D007986 3.4e-07 60.1 243 23.5
Phvul.010G032900 Phaseolus vulgaris HOM05D006655 ORTHO05D007986 3.4e-07 60.1 266 24.1
SMO347G0004 Selaginella moellendorffii HOM05D006655 ORTHO05D007986 3.4e-07 60.1 225 22.7
PSO384G1723 Papaver somniferum HOM05D006655 ORTHO05D007986 5.8e-07 59.3 255 23.1
Glyma.16G082200 Glycine max HOM05D006655 ORTHO05D007986 9.8e-07 58.5 266 23.7
Gohir.A09G111300 Gossypium hirsutum HOM05D006655 ORTHO05D007986 9.8e-07 58.5 240 23.3
Pp3c15_7750 Physcomitrium patens HOM05D005785 ORTHO05D007017 9.8e-07 58.5 244 23.4
Medtr8g010700 Medicago truncatula HOM05D006655 ORTHO05D007986 1.3e-06 58.2 255 23.9
CAN.G379.22 Capsicum annuum HOM05D006655 ORTHO05D007986 1.7e-06 57.8 230 23.5
unitig_90.g27460 Utricularia gibba HOM05D006655 ORTHO05D007986 1.7e-06 57.8 249 24.9
Lj3g0004618 Lotus japonicus HOM05D006655 ORTHO05D007986 2.2e-06 57.4 248 22.2
Nn2g14958 Nelumbo nucifera HOM05D006655 ORTHO05D007986 2.2e-06 57.4 239 23.8
Aa31LG2G18820 Aethionema arabicum HOM05D006655 ORTHO05D007986 2.9e-06 57.0 242 23.1
SGA_v2.0_scaffold8G04557 Striga asiatica HOM05D006655 ORTHO05D007986 2.9e-06 57.0 236 23.7
BraA03t15119Z Brassica rapa HOM05D006655 ORTHO05D007986 4.9e-06 56.2 222 22.1
Oeu061293.2 Olea europaea HOM05D006655 ORTHO05D007986 4.9e-06 56.2 229 23.6
TWI38G0712 Tripterygium wilfordii HOM05D006655 ORTHO05D007986 4.9e-06 56.2 260 21.9
Mapoly0030s0154 Marchantia polymorpha HOM05D006979 ORTHO05D008857 6.4e-06 55.8 46 50.0


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