Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen12g023630 Solanum pennellii HOM05D008172 ORTHO05D007977 5.6e-49 199.1 99 100.0
Sopen12g023610 Solanum pennellii HOM05D008172 ORTHO05D007977 8.7e-34 148.7 93 82.8
Solyc12g049070.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 1.1e-33 148.3 93 80.6
Sopen12g023620 Solanum pennellii HOM05D008172 ORTHO05D007977 2.5e-33 147.1 93 81.7
Sopen12g023640 Solanum pennellii HOM05D008172 ORTHO05D007977 2.5e-33 147.1 93 79.6
Sopen12g023460 Solanum pennellii HOM05D008172 ORTHO05D007977 4.3e-33 146.4 93 81.7
Solyc12g049040.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 9.6e-33 145.2 92 81.5
Solyc12g049160.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 1.6e-32 144.4 93 80.6
Solyc12g049050.2 Solanum lycopersicum HOM05D008172 ORTHO05D007977 2.1e-32 144.1 93 80.6
Solyc12g049170.2 Solanum lycopersicum HOM05D008172 ORTHO05D007977 6.2e-32 142.5 93 80.6
PGSC0003DMG400023862 Solanum tuberosum HOM05D008172 ORTHO05D007977 3.4e-30 136.7 93 78.5
Sopen12g023590 Solanum pennellii HOM05D008172 ORTHO05D007977 7.6e-30 135.6 92 75.0
PGSC0003DMG400011615 Solanum tuberosum HOM05D008172 ORTHO05D007977 1.3e-29 134.8 93 76.3
Solyc12g100090.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 2.9e-29 133.7 93 76.3
PGSC0003DMG400023861 Solanum tuberosum HOM05D008172 ORTHO05D007977 2.9e-29 133.7 87 81.6
Sopen12g023470 Solanum pennellii HOM05D008172 ORTHO05D007977 1.4e-28 131.3 93 76.3
PGSC0003DMG400011614 Solanum tuberosum HOM05D008172 ORTHO05D007977 2.4e-28 130.6 93 75.3
Solyc12g049140.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 5.4e-28 129.4 93 74.2
Solyc12g049180.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 1.2e-27 128.3 97 68.0
PGSC0003DMG400011599 Solanum tuberosum HOM05D008172 ORTHO05D007977 3.0e-26 123.6 93 71.0
Sopen12g023450 Solanum pennellii HOM05D008172 ORTHO05D007977 1.9e-25 120.9 104 69.2
Sopen12g034730 Solanum pennellii HOM05D008172 ORTHO05D007977 1.9e-25 120.9 88 75.0
PGSC0003DMG400023859 Solanum tuberosum HOM05D008172 ORTHO05D007977 2.8e-24 117.1 85 75.3
Solyc12g049090.3 Solanum lycopersicum HOM05D008172 ORTHO05D007977 4.8e-24 116.3 93 71.0
Sopen12g023600 Solanum pennellii HOM05D008172 ORTHO05D007977 6.2e-24 115.9 93 67.7
Solyc12g049150.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 2.4e-23 114.0 93 67.7
Sopen12g034700 Solanum pennellii HOM05D008172 ORTHO05D007977 9.9e-22 108.6 87 71.3
Sopen12g034710 Solanum pennellii HOM05D008172 ORTHO05D007977 5.5e-20 102.8 79 72.2
Sopen12g034720 Solanum pennellii HOM05D008172 ORTHO05D007977 7.1e-20 102.4 81 72.8
PGSC0003DMG400023858 Solanum tuberosum HOM05D008172 ORTHO05D007977 3.5e-19 100.1 81 70.4
Solyc12g038170.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 4.6e-19 99.8 81 67.9
PGSC0003DMG400011600 Solanum tuberosum HOM05D008172 ORTHO05D007977 6.0e-19 99.4 99 57.6
Sopen12g034740 Solanum pennellii HOM05D008172 ORTHO05D007977 3.0e-18 97.1 99 57.6
Solyc12g038240.3 Solanum lycopersicum HOM05D008172 ORTHO05D007977 2.5e-17 94.0 91 60.4
PGSC0003DMG400023857 Solanum tuberosum HOM05D008172 ORTHO05D007977 9.6e-17 92.0 78 64.1
PGSC0003DMG400006488 Solanum tuberosum HOM05D008172 ORTHO05D007977 4.8e-16 89.7 94 56.4
Solyc12g100080.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 6.2e-16 89.4 87 63.2
Solyc12g100110.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 8.1e-16 89.0 87 62.1
Solyc12g100100.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 1.4e-15 88.2 66 72.7
PGSC0003DMG400023856 Solanum tuberosum HOM05D008172 ORTHO05D007977 3.1e-15 87.0 54 81.5
Sopen12g023480 Solanum pennellii HOM05D008172 ORTHO05D007977 5.3e-15 86.3 72 70.8
Sopen12g018240 Solanum pennellii HOM05D008172 ORTHO05D007977 6.9e-15 85.9 88 59.1
PGSC0003DMG400023855 Solanum tuberosum HOM05D008172 ORTHO05D007977 6.9e-15 85.9 117 47.9
PGSC0003DMG400006490 Solanum tuberosum HOM05D008172 ORTHO05D007977 1.4e-12 78.2 72 63.9
Sopen12g022960 Solanum pennellii HOM05D008172 ORTHO05D007977 2.5e-12 77.4 64 65.6
Sopen12g022950 Solanum pennellii HOM05D008172 ORTHO05D007977 7.1e-12 75.9 60 70.0
Sopen12g017410 Solanum pennellii HOM05D008172 ORTHO05D007977 2.1e-11 74.3 54 74.1
Sopen12g017900 Solanum pennellii HOM05D000002 ORTHO05D007977 6.0e-11 72.8 45 77.8
Sopen12g022940 Solanum pennellii HOM05D008172 ORTHO05D007977 6.0e-11 72.8 81 58.0
PGSC0003DMG400006489 Solanum tuberosum HOM05D008172 ORTHO05D007977 1.0e-10 72.0 76 55.3
Solyc12g044710.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 1.3e-10 71.6 64 62.5
Peaxi162Scf00062g01212 Petunia axillaris HOM05D008172 ORTHO05D007977 8.7e-10 68.9 57 63.2
Peaxi162Scf00062g01216 Petunia axillaris HOM05D008172 ORTHO05D007977 8.7e-10 68.9 57 63.2
CAN.G575.61 Capsicum annuum HOM05D008172 ORTHO05D007977 1.1e-09 68.6 74 59.5
Nitab4.5_0000508g0080 Nicotiana tabacum HOM05D008172 ORTHO05D007977 2.4e-07 60.8 57 56.1
Nitab4.5_0008647g0050 Nicotiana tabacum HOM05D008172 ORTHO05D007977 5.3e-07 59.7 49 63.3
Peaxi162Scf00062g00114 Petunia axillaris HOM05D008172 ORTHO05D007977 5.3e-07 59.7 71 47.9
Peaxi162Scf00062g01218 Petunia axillaris HOM05D008172 ORTHO05D007977 1.5e-06 58.2 54 55.6
Nitab4.5_0007819g0020 Nicotiana tabacum HOM05D008172 ORTHO05D007977 2.6e-06 57.4 57 56.1
CAN.G575.57 Capsicum annuum HOM05D008172 ORTHO05D007977 7.6e-06 55.8 39 76.9
Nitab4.5_0006164g0050 Nicotiana tabacum HOM05D008172 ORTHO05D283931 7.6e-06 55.8 49 57.1


User provided reference genes

Program Settings