Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen12g023470 Solanum pennellii HOM05D008172 ORTHO05D007977 4.0e-55 219.9 132 100.0
Solyc12g049090.3 Solanum lycopersicum HOM05D008172 ORTHO05D007977 1.8e-47 194.5 132 90.2
Solyc12g049040.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 1.2e-40 171.8 132 83.3
Sopen12g023460 Solanum pennellii HOM05D008172 ORTHO05D007977 1.2e-40 171.8 132 83.3
Solyc12g049070.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 2.1e-40 171.0 132 82.6
Sopen12g023610 Solanum pennellii HOM05D008172 ORTHO05D007977 4.7e-40 169.9 132 83.3
Sopen12g023640 Solanum pennellii HOM05D008172 ORTHO05D007977 8.0e-40 169.1 132 81.8
Solyc12g049160.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 8.9e-39 165.6 132 81.8
Solyc12g049050.2 Solanum lycopersicum HOM05D008172 ORTHO05D007977 3.4e-38 163.7 132 81.1
Sopen12g023620 Solanum pennellii HOM05D008172 ORTHO05D007977 5.8e-38 162.9 128 82.8
Solyc12g049170.2 Solanum lycopersicum HOM05D008172 ORTHO05D007977 2.2e-37 161.0 132 81.1
Sopen12g023480 Solanum pennellii HOM05D008172 ORTHO05D007977 4.1e-36 156.8 107 96.3
Sopen12g023590 Solanum pennellii HOM05D008172 ORTHO05D007977 2.0e-35 154.5 132 78.0
PGSC0003DMG400011614 Solanum tuberosum HOM05D008172 ORTHO05D007977 2.7e-35 154.1 132 79.5
PGSC0003DMG400011615 Solanum tuberosum HOM05D008172 ORTHO05D007977 7.8e-35 152.5 128 78.1
Solyc12g049140.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 5.0e-34 149.8 132 75.8
PGSC0003DMG400011599 Solanum tuberosum HOM05D008172 ORTHO05D007977 6.2e-32 142.9 128 75.8
Sopen12g023450 Solanum pennellii HOM05D008172 ORTHO05D007977 3.1e-31 140.6 132 70.5
Sopen12g023600 Solanum pennellii HOM05D008172 ORTHO05D007977 4.4e-30 136.7 132 73.5
Solyc12g100090.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 9.9e-30 135.6 93 77.4
PGSC0003DMG400023862 Solanum tuberosum HOM05D008172 ORTHO05D007977 1.7e-29 134.8 93 76.3
Sopen12g023630 Solanum pennellii HOM05D008172 ORTHO05D007977 8.3e-29 132.5 93 76.3
PGSC0003DMG400023861 Solanum tuberosum HOM05D008172 ORTHO05D007977 2.4e-28 131.0 83 83.1
Solyc12g049150.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 5.4e-28 129.8 132 71.2
Solyc12g049180.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 2.3e-26 124.4 95 69.5
PGSC0003DMG400023859 Solanum tuberosum HOM05D008172 ORTHO05D007977 2.5e-25 120.9 132 71.2
Sopen12g034730 Solanum pennellii HOM05D008172 ORTHO05D007977 2.8e-24 117.5 96 68.8
PGSC0003DMG400023858 Solanum tuberosum HOM05D008172 ORTHO05D007977 4.0e-23 113.6 90 71.1
Solyc12g038240.3 Solanum lycopersicum HOM05D008172 ORTHO05D007977 5.2e-23 113.2 97 62.9
Sopen12g034700 Solanum pennellii HOM05D008172 ORTHO05D007977 7.6e-22 109.4 93 67.7
Solyc12g038170.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 9.9e-22 109.0 90 65.6
Sopen12g034720 Solanum pennellii HOM05D008172 ORTHO05D007977 3.8e-21 107.1 88 70.5
Sopen12g034710 Solanum pennellii HOM05D008172 ORTHO05D007977 1.4e-20 105.1 79 73.4
PGSC0003DMG400011600 Solanum tuberosum HOM05D008172 ORTHO05D007977 2.1e-19 101.3 93 61.3
PGSC0003DMG400023857 Solanum tuberosum HOM05D008172 ORTHO05D007977 4.6e-19 100.1 84 64.3
Solyc12g100080.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 4.3e-17 93.6 74 71.6
Solyc12g100110.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 4.3e-17 93.6 74 71.6
PGSC0003DMG400006488 Solanum tuberosum HOM05D008172 ORTHO05D007977 1.2e-16 92.0 93 54.8
PGSC0003DMG400006490 Solanum tuberosum HOM05D008172 ORTHO05D007977 1.2e-16 92.0 70 70.0
Sopen12g034740 Solanum pennellii HOM05D008172 ORTHO05D007977 1.6e-16 91.7 132 47.7
Solyc12g100100.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 2.8e-16 90.9 132 61.4
PGSC0003DMG400023856 Solanum tuberosum HOM05D008172 ORTHO05D007977 3.1e-15 87.4 90 55.6
Sopen12g022960 Solanum pennellii HOM05D008172 ORTHO05D007977 6.9e-15 86.3 94 54.3
Sopen12g018240 Solanum pennellii HOM05D008172 ORTHO05D007977 1.5e-14 85.1 118 48.3
Solyc12g044710.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 2.6e-14 84.3 94 54.3
PGSC0003DMG400023855 Solanum tuberosum HOM05D008172 ORTHO05D007977 2.6e-14 84.3 114 48.2
Sopen12g022940 Solanum pennellii HOM05D008172 ORTHO05D007977 1.1e-12 79.0 75 64.0
Sopen12g022950 Solanum pennellii HOM05D008172 ORTHO05D007977 1.4e-12 78.6 64 67.2
Sopen12g017900 Solanum pennellii HOM05D000002 ORTHO05D007977 3.5e-11 73.9 55 69.1
CAN.G575.61 Capsicum annuum HOM05D008172 ORTHO05D007977 6.0e-11 73.2 93 52.7
PGSC0003DMG400006489 Solanum tuberosum HOM05D008172 ORTHO05D007977 7.8e-11 72.8 71 59.2
Sopen12g017410 Solanum pennellii HOM05D008172 ORTHO05D007977 2.3e-10 71.2 54 70.4
Peaxi162Scf00062g01212 Petunia axillaris HOM05D008172 ORTHO05D007977 8.7e-10 69.3 57 63.2
Peaxi162Scf00062g01216 Petunia axillaris HOM05D008172 ORTHO05D007977 8.7e-10 69.3 57 63.2
Nitab4.5_0000508g0080 Nicotiana tabacum HOM05D008172 ORTHO05D007977 5.6e-09 66.6 61 57.4
Nitab4.5_0008647g0050 Nicotiana tabacum HOM05D008172 ORTHO05D007977 1.6e-08 65.1 58 60.3
Nitab4.5_0007819g0020 Nicotiana tabacum HOM05D008172 ORTHO05D007977 6.2e-08 63.2 61 57.4
Nitab4.5_0001925g0070 Nicotiana tabacum HOM05D008172 ORTHO05D283996 4.0e-07 60.5 100 41.0
Peaxi162Scf00062g00114 Petunia axillaris HOM05D008172 ORTHO05D007977 9.0e-07 59.3 82 43.9
Peaxi162Scf00062g01218 Petunia axillaris HOM05D008172 ORTHO05D007977 1.2e-06 58.9 55 54.5
CAN.G575.57 Capsicum annuum HOM05D008172 ORTHO05D007977 2.0e-06 58.2 43 74.4
PGSC0003DMG400004446 Solanum tuberosum HOM05D008172 ORTHO05D007977 7.6e-06 56.2 69 47.8


User provided reference genes

Program Settings