Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen12g023050 Solanum pennellii HOM05D003574 ORTHO05D002175 8.6e-168 593.6 299 100.0
Sopen05g008570 Solanum pennellii HOM05D003574 ORTHO05D002175 2.4e-93 346.3 832 34.0
Sopen03g014810 Solanum pennellii HOM05D003574 ORTHO05D002175 1.7e-75 287.0 254 66.9
Sopen02g001430 Solanum pennellii HOM05D003574 ORTHO05D002175 1.5e-71 273.9 278 60.4
PGSC0003DMG400023952 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.4e-61 240.7 256 59.0
Solyc10g055685.1 Solanum lycopersicum HOM05D003574 ORTHO05D002175 3.0e-56 223.0 212 64.2
PGSC0003DMG400040325 Solanum tuberosum HOM05D000995 ORTHO05D001773 2.2e-54 216.9 118 82.2
PGSC0003DMG400008626 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.4e-53 214.2 239 56.1
PGSC0003DMG400001285 Solanum tuberosum HOM05D000995 ORTHO05D000638 1.8e-53 213.8 118 81.4
PGSC0003DMG400038482 Solanum tuberosum HOM05D000995 ORTHO05D000638 1.0e-51 208.0 114 81.6
PGSC0003DMG400013728 Solanum tuberosum HOM05D000995 ORTHO05D001773 2.9e-51 206.5 118 78.0
PGSC0003DMG400018974 Solanum tuberosum HOM05D000995 ORTHO05D001773 2.5e-50 203.4 118 78.8
Solyc04g048905.1 Solanum lycopersicum HOM05D000995 ORTHO05D001773 9.8e-47 191.4 91 95.6
Sopen03g026790 Solanum pennellii HOM05D003574 ORTHO05D002175 7.0e-45 185.3 183 62.8
Solyc05g150133.1 Solanum lycopersicum HOM05D003574 ORTHO05D002175 1.2e-41 174.5 107 88.8
PGSC0003DMG400001088 Solanum tuberosum HOM05D003574 ORTHO05D002175 2.1e-41 173.7 107 86.9
PGSC0003DMG400013727 Solanum tuberosum HOM05D003574 ORTHO05D002175 2.1e-41 173.7 107 86.9
Sopen05g013400 Solanum pennellii HOM05D000424 ORTHO05D000355 6.8e-40 168.7 107 86.9
PGSC0003DMG400039961 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.5e-39 167.5 107 84.1
PGSC0003DMG400023225 Solanum tuberosum HOM05D003574 ORTHO05D002175 9.5e-34 148.3 92 88.0
Sopen10g019390 Solanum pennellii HOM05D003574 ORTHO05D002175 2.8e-33 146.7 96 82.3
PGSC0003DMG400045822 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.4e-32 144.4 92 87.0
PGSC0003DMG400044250 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.2e-31 141.4 107 74.8
Nitab4.5_0000199g0110 Nicotiana tabacum HOM05D000995 ORTHO05D010997 3.4e-31 139.8 117 53.0
Nitab4.5_0004446g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.0e-28 129.0 210 38.1
Nitab4.5_0000621g0100 Nicotiana tabacum HOM05D003574 ORTHO05D010997 1.3e-27 127.9 117 47.9
Nitab4.5_0000032g0300 Nicotiana tabacum HOM05D000995 ORTHO05D010997 3.0e-27 126.7 117 49.6
Nitab4.5_0008368g0050 Nicotiana tabacum HOM05D003574 ORTHO05D001773 6.6e-27 125.6 114 49.1
Nitab4.5_0001868g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.6e-27 125.2 117 49.6
PGSC0003DMG400009586 Solanum tuberosum HOM05D000995 ORTHO05D000638 8.6e-27 125.2 117 44.4
Nitab4.5_0001057g0110 Nicotiana tabacum HOM05D003574 ORTHO05D010997 9.5e-26 121.7 99 52.5
Nitab4.5_0007583g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.7e-25 119.4 112 45.5
Nitab4.5_0007010g0010 Nicotiana tabacum HOM05D003574 ORTHO05D010997 6.2e-25 119.0 117 46.2
PGSC0003DMG400043763 Solanum tuberosum HOM05D003574 ORTHO05D002175 3.4e-23 113.2 144 51.4
PGSC0003DMG400030157 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.7e-22 110.9 79 72.2
Nitab4.5_0002884g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.7e-22 109.8 113 54.0
Nitab4.5_0000679g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.4e-21 107.8 107 53.3
Nitab4.5_0004669g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.4e-21 105.9 107 52.3
Nitab4.5_0001179g0140 Nicotiana tabacum HOM05D003574 ORTHO05D000638 3.5e-20 103.2 409 25.4
Nitab4.5_0000239g0140 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.6e-20 102.8 228 33.3
PGSC0003DMG400045633 Solanum tuberosum HOM05D003574 ORTHO05D002175 4.6e-20 102.8 79 68.4
Nitab4.5_0001583g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.7e-19 100.9 114 48.2
Nitab4.5_0001586g0190 Nicotiana tabacum HOM05D003574 ORTHO05D010997 1.7e-19 100.9 93 48.4
Nitab4.5_0000806g0170 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.3e-19 100.5 107 50.5
Nitab4.5_0004446g0030 Nicotiana tabacum HOM05D003574 ORTHO05D010997 8.6e-19 98.6 79 53.2
Nitab4.5_0000687g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.5e-18 97.1 106 43.4
Nitab4.5_0000903g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.3e-18 96.3 98 55.1
CAN.G229.21 Capsicum annuum HOM05D000310 ORTHO05D000509 7.3e-18 95.5 117 36.8
Nitab4.5_0000015g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.5e-18 95.1 106 50.9
PGSC0003DMG400031332 Solanum tuberosum HOM05D000995 ORTHO05D001773 2.8e-17 93.6 47 85.1
Nitab4.5_0005115g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.7e-17 92.8 351 27.6
Nitab4.5_0004998g0050 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.1e-16 90.1 85 48.2
PGSC0003DMG400020615 Solanum tuberosum HOM05D000995 ORTHO05D001773 8.9e-16 88.6 89 41.6
Nitab4.5_0000004g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.2e-15 88.2 94 51.1
Nitab4.5_0006253g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.2e-15 88.2 107 49.5
Nitab4.5_0001924g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.0e-15 87.4 379 23.5
PGSC0003DMG400030152 Solanum tuberosum HOM05D000995 ORTHO05D001773 2.6e-15 87.0 50 78.0
CAN.G624.18 Capsicum annuum HOM05D000995 ORTHO05D000638 1.3e-14 84.7 116 38.8
Nitab4.5_0000481g0130 Nicotiana tabacum HOM05D000995 ORTHO05D010997 2.9e-14 83.6 74 51.4
Nitab4.5_0013975g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.4e-14 82.4 179 35.8
Nitab4.5_0022150g0020 Nicotiana tabacum HOM05D003574 ORTHO05D012628 6.4e-14 82.4 78 57.7
MSTRG.26045 Avicennia marina HOM05D000995 ORTHO05D000638 3.2e-13 80.1 117 37.6
Nitab4.5_0000736g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.2e-13 80.1 124 41.9
Nitab4.5_0010291g0010 Nicotiana tabacum HOM05D000995 ORTHO05D000638 3.2e-13 80.1 74 45.9
Nitab4.5_0000230g0120 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.2e-13 79.7 83 51.8
Nitab4.5_0002941g0050 Nicotiana tabacum HOM05D000995 ORTHO05D000638 5.4e-13 79.3 113 38.1
PGSC0003DMG400043951 Solanum tuberosum HOM05D003574 ORTHO05D002175 5.4e-13 79.3 80 55.0
QL01p006663 Quercus lobata HOM05D067426 ORTHO05D001773 7.1e-13 79.0 95 34.7
CAN.G322.132 Capsicum annuum HOM05D000995 ORTHO05D000638 1.2e-12 78.2 88 39.8
Nitab4.5_0004469g0130 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.2e-12 78.2 70 50.0
Nitab4.5_0000621g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.6e-12 76.3 148 35.8
Nitab4.5_0002002g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.6e-12 76.3 203 31.0
Nitab4.5_0006582g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.0e-12 75.9 100 48.0
Nitab4.5_0000022g0410 Nicotiana tabacum HOM05D000995 ORTHO05D001773 7.8e-12 75.5 80 41.2
Nitab4.5_0001960g0100 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.3e-11 74.7 185 33.0
Nitab4.5_0000053g0090 Nicotiana tabacum HOM05D003574 ORTHO05D010997 1.7e-11 74.3 73 46.6
Nitab4.5_0000115g0160 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.7e-11 74.3 79 53.2
Nitab4.5_0003569g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.9e-11 73.2 100 43.0
Nitab4.5_0000161g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.6e-11 72.4 75 52.0
Nitab4.5_0001488g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.1e-10 71.6 134 38.8
Hma1.2p1_1193F.1_g265550 Hydrangea macrophylla HOM05D000995 ORTHO05D001773 1.9e-10 70.9 114 30.7
PGSC0003DMG400023226 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.9e-10 70.9 54 68.5
Hma1.2p1_2783F.1_g328410 Hydrangea macrophylla HOM05D000995 ORTHO05D001773 2.5e-10 70.5 106 32.1
Nitab4.5_0008600g0040 Nicotiana tabacum HOM05D003574 ORTHO05D010997 2.5e-10 70.5 67 46.3
Hma1.2p1_0494F.1_g165370 Hydrangea macrophylla HOM05D000995 ORTHO05D001773 3.3e-10 70.1 114 30.7
Nitab4.5_0000141g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.3e-10 70.1 236 28.4
Nitab4.5_0007225g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.3e-10 69.7 230 27.4
Nitab4.5_0004998g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.6e-10 68.6 73 50.7
Nitab4.5_0005402g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.3e-09 68.2 159 32.1
Nitab4.5_0000160g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.6e-09 66.6 73 50.7
Hma1.2p1_0446F.1_g154720 Hydrangea macrophylla HOM05D000995 ORTHO05D000638 4.8e-09 66.2 100 32.0
Nitab4.5_0010651g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.8e-09 66.2 204 29.9
Nitab4.5_0000716g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.1e-08 65.1 346 24.6
ClCG09G014960 Citrullus lanatus HOM05D000995 ORTHO05D001773 1.4e-08 64.7 117 29.9
EL10Ac1g00951 Beta vulgaris HOM05D000995 ORTHO05D001773 1.8e-08 64.3 81 38.3
EL10Ac2g03521 Beta vulgaris HOM05D004781 ORTHO05D001773 1.8e-08 64.3 81 38.3
EL10Ac3g06382 Beta vulgaris HOM05D004781 ORTHO05D001773 1.8e-08 64.3 81 38.3
EL10Ac6g14812 Beta vulgaris HOM05D004781 ORTHO05D001773 1.8e-08 64.3 81 38.3
MELO3C019586.2 Cucumis melo HOM05D000995 ORTHO05D000638 1.8e-08 64.3 113 31.0
EL10Ac6g13855 Beta vulgaris HOM05D004781 ORTHO05D001773 2.4e-08 63.9 81 38.3
Nitab4.5_0003295g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.1e-08 63.5 157 33.8
ClCG01G016350 Citrullus lanatus HOM05D000995 ORTHO05D001773 4.0e-08 63.2 114 29.8
Nitab4.5_0000481g0140 Nicotiana tabacum HOM05D003574 ORTHO05D010997 4.0e-08 63.2 59 45.8
Sed0008092 Sechium edule HOM05D000995 ORTHO05D001773 5.3e-08 62.8 112 30.4
ClCG02G008620 Citrullus lanatus HOM05D000995 ORTHO05D001773 6.9e-08 62.4 117 28.2
ClCG09G009920 Citrullus lanatus HOM05D000995 ORTHO05D001773 6.9e-08 62.4 117 29.1
Nitab4.5_0000154g0180 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.9e-08 62.4 57 57.9
Nitab4.5_0003015g0060 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.9e-08 62.4 173 30.1
Nitab4.5_0022390g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.9e-08 62.4 64 54.7
MELO3C000787.2 Cucumis melo HOM05D000995 ORTHO05D001773 9.0e-08 62.0 113 29.2
Nitab4.5_0002755g0120 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.0e-08 62.0 57 57.9
EL10Ac9g22875 Beta vulgaris HOM05D004781 ORTHO05D001773 1.2e-07 61.6 81 37.0
ClCG01G008830 Citrullus lanatus HOM05D000995 ORTHO05D000638 1.2e-07 61.6 117 29.9
MELO3C000923.2 Cucumis melo HOM05D000995 ORTHO05D002620 1.5e-07 61.2 113 29.2
MELO3C027312.2 Cucumis melo HOM05D000995 ORTHO05D001773 1.5e-07 61.2 140 28.6
Hma1.2p1_0120F.1_g057263 Hydrangea macrophylla HOM05D000995 ORTHO05D001773 1.5e-07 61.2 72 36.1
Hma1.2p1_0663F.1_g198890 Hydrangea macrophylla HOM05D000995 ORTHO05D001773 1.5e-07 61.2 72 36.1
MELO3C026674.2 Cucumis melo HOM05D000995 ORTHO05D001773 2.0e-07 60.8 113 29.2
Nitab4.5_0001742g0010 Nicotiana tabacum HOM05D003574 ORTHO05D010997 2.0e-07 60.8 54 51.9
Nitab4.5_0004620g0050 Nicotiana tabacum HOM05D000995 ORTHO05D001773 2.0e-07 60.8 74 40.5
ClCG08G000680 Citrullus lanatus HOM05D000995 ORTHO05D001773 2.6e-07 60.5 117 29.9
MELO3C000149.2 Cucumis melo HOM05D000995 ORTHO05D000638 4.4e-07 59.7 113 29.2
Nitab4.5_0003579g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.4e-07 59.7 144 31.9
Sed0014458 Sechium edule HOM05D000995 ORTHO05D012510 4.4e-07 59.7 89 29.2
Sed0018066 Sechium edule HOM05D000995 ORTHO05D000638 4.4e-07 59.7 116 31.0
Nitab4.5_0007326g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.8e-07 59.3 96 38.5
Nitab4.5_0022150g0010 Nicotiana tabacum HOM05D003574 ORTHO05D010997 5.8e-07 59.3 51 49.0
MELO3C027383.2 Cucumis melo HOM05D000995 ORTHO05D001773 7.6e-07 58.9 113 27.4
Nitab4.5_0002206g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.6e-07 58.9 54 48.1
ClCG07G007890 Citrullus lanatus HOM05D000995 ORTHO05D001773 9.9e-07 58.5 117 29.1
Nitab4.5_0001591g0140 Nicotiana tabacum HOM05D003574 ORTHO05D010997 9.9e-07 58.5 60 46.7
Rhsim01G0099100 Rhododendron simsii HOM05D000995 ORTHO05D001773 9.9e-07 58.5 119 29.4
Rhsim01G0104900 Rhododendron simsii HOM05D000995 ORTHO05D001773 9.9e-07 58.5 119 29.4
Rhsim13G0131600 Rhododendron simsii HOM05D000995 ORTHO05D002620 9.9e-07 58.5 119 29.4
MELO3C029552.2 Cucumis melo HOM05D000995 ORTHO05D000638 1.3e-06 58.2 113 27.4
Nitab4.5_0000959g0020 Nicotiana tabacum HOM05D003574 ORTHO05D000638 1.3e-06 58.2 72 44.4
Hund30412 Selenicereus undatus HOM05D004781 ORTHO05D001773 1.3e-06 58.2 99 28.3
EL10Ac6g13965 Beta vulgaris HOM05D004781 ORTHO05D001773 1.7e-06 57.8 81 35.8
MELO3C014207.2 Cucumis melo HOM05D000995 ORTHO05D000638 1.7e-06 57.8 112 28.6
Hund13033 Selenicereus undatus HOM05D004781 ORTHO05D001773 1.7e-06 57.8 73 35.6
Nitab4.5_0020094g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.2e-06 57.4 57 49.1
Rhsim08G0106900 Rhododendron simsii HOM05D000995 ORTHO05D002620 2.2e-06 57.4 119 29.4
AUR62036388 Chenopodium quinoa HOM05D000995 ORTHO05D000638 2.9e-06 57.0 108 30.6
Rhsim01G0078000 Rhododendron simsii HOM05D000995 ORTHO05D001773 2.9e-06 57.0 119 28.6
Nitab4.5_0004669g0030 Nicotiana tabacum HOM05D003574 ORTHO05D010997 3.8e-06 56.6 54 48.1
Nitab4.5_0013377g0010 Nicotiana tabacum HOM05D003574 ORTHO05D010997 3.8e-06 56.6 57 47.4
Hund01802 Selenicereus undatus HOM05D004781 ORTHO05D001773 3.8e-06 56.6 99 27.3
MELO3C027512.2 Cucumis melo HOM05D000995 ORTHO05D000638 4.9e-06 56.2 113 27.4
Nitab4.5_0000050g0250 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.9e-06 56.2 100 36.0
Nitab4.5_0000101g0410 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.9e-06 56.2 125 32.8
Nitab4.5_0000205g0130 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.9e-06 56.2 266 25.2
AUR62035177 Chenopodium quinoa HOM05D004781 ORTHO05D001773 6.4e-06 55.8 78 39.7
Nitab4.5_0000115g0150 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.4e-06 55.8 54 48.1
Nitab4.5_0000142g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.4e-06 55.8 135 32.6
Rhsim02G0098200 Rhododendron simsii HOM05D000995 ORTHO05D002620 6.4e-06 55.8 124 28.2
Nitab4.5_0001384g0140 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.4e-06 55.5 253 25.3
Hund08788 Selenicereus undatus HOM05D004781 ORTHO05D001773 8.4e-06 55.5 99 27.3
Hund29812 Selenicereus undatus HOM05D004781 ORTHO05D001773 8.4e-06 55.5 73 34.2


User provided reference genes

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