Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen12g022960 Solanum pennellii HOM05D008172 ORTHO05D007977 2.4e-34 150.2 94 100.0
Solyc12g044710.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 2.9e-32 143.3 94 93.6
Sopen12g022950 Solanum pennellii HOM05D008172 ORTHO05D007977 3.5e-25 119.8 94 84.0
PGSC0003DMG400023857 Solanum tuberosum HOM05D008172 ORTHO05D007977 3.0e-21 106.7 68 82.4
PGSC0003DMG400006488 Solanum tuberosum HOM05D008172 ORTHO05D007977 3.7e-19 99.8 94 72.3
PGSC0003DMG400011614 Solanum tuberosum HOM05D008172 ORTHO05D007977 2.6e-17 93.6 65 72.3
PGSC0003DMG400023862 Solanum tuberosum HOM05D008172 ORTHO05D007977 3.5e-17 93.2 93 55.9
Solyc12g038240.3 Solanum lycopersicum HOM05D008172 ORTHO05D007977 1.0e-16 91.7 93 57.0
Sopen12g022940 Solanum pennellii HOM05D008172 ORTHO05D007977 1.0e-16 91.7 71 64.8
Sopen12g018240 Solanum pennellii HOM05D008172 ORTHO05D007977 1.7e-16 90.9 64 75.0
Solyc12g049040.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 3.8e-16 89.7 94 55.3
Solyc12g049170.2 Solanum lycopersicum HOM05D008172 ORTHO05D007977 3.8e-16 89.7 66 71.2
Sopen12g023470 Solanum pennellii HOM05D008172 ORTHO05D007977 3.8e-16 89.7 94 54.3
PGSC0003DMG400023856 Solanum tuberosum HOM05D008172 ORTHO05D007977 8.5e-16 88.6 89 68.5
Sopen12g023640 Solanum pennellii HOM05D008172 ORTHO05D007977 1.1e-15 88.2 94 54.3
Solyc12g038170.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 1.5e-15 87.8 65 66.2
PGSC0003DMG400011600 Solanum tuberosum HOM05D008172 ORTHO05D007977 2.5e-15 87.0 65 67.7
PGSC0003DMG400023858 Solanum tuberosum HOM05D008172 ORTHO05D007977 3.2e-15 86.7 65 70.8
Sopen12g023610 Solanum pennellii HOM05D008172 ORTHO05D007977 7.2e-15 85.5 66 68.2
Solyc12g049160.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 1.6e-14 84.3 66 66.7
Sopen12g023460 Solanum pennellii HOM05D008172 ORTHO05D007977 2.7e-14 83.6 66 66.7
Solyc12g049050.2 Solanum lycopersicum HOM05D008172 ORTHO05D007977 3.6e-14 83.2 94 52.1
Sopen12g017410 Solanum pennellii HOM05D008172 ORTHO05D007977 6.1e-14 82.4 57 71.9
Solyc12g049070.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 8.0e-14 82.0 66 65.2
Solyc12g049090.3 Solanum lycopersicum HOM05D008172 ORTHO05D007977 1.0e-13 81.6 94 52.1
PGSC0003DMG400023861 Solanum tuberosum HOM05D008172 ORTHO05D007977 1.0e-13 81.6 61 67.2
PGSC0003DMG400011615 Solanum tuberosum HOM05D008172 ORTHO05D007977 1.4e-13 81.3 62 69.4
PGSC0003DMG400011599 Solanum tuberosum HOM05D008172 ORTHO05D007977 3.0e-13 80.1 62 69.4
Sopen12g023620 Solanum pennellii HOM05D008172 ORTHO05D007977 4.0e-13 79.7 62 67.7
Sopen12g023590 Solanum pennellii HOM05D008172 ORTHO05D007977 5.2e-13 79.3 79 59.5
PGSC0003DMG400023855 Solanum tuberosum HOM05D008172 ORTHO05D007977 6.8e-13 79.0 64 64.1
Sopen12g017900 Solanum pennellii HOM05D000002 ORTHO05D007977 8.8e-13 78.6 55 70.9
Sopen12g023630 Solanum pennellii HOM05D008172 ORTHO05D007977 1.2e-12 78.2 64 65.6
Sopen12g034730 Solanum pennellii HOM05D008172 ORTHO05D007977 1.2e-12 78.2 94 51.1
PGSC0003DMG400023859 Solanum tuberosum HOM05D008172 ORTHO05D007977 1.5e-12 77.8 65 63.1
Solyc12g049140.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 2.6e-12 77.0 66 63.6
Sopen12g034740 Solanum pennellii HOM05D008172 ORTHO05D007977 3.4e-12 76.6 90 52.2
Solyc12g100100.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 5.7e-12 75.9 66 63.6
Solyc12g049180.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 2.8e-11 73.6 66 65.2
Sopen12g023450 Solanum pennellii HOM05D008172 ORTHO05D007977 2.8e-11 73.6 56 69.6
Solyc12g100080.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 3.7e-11 73.2 68 60.3
Solyc12g100110.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 3.7e-11 73.2 68 60.3
Peaxi162Scf00062g01212 Petunia axillaris HOM05D008172 ORTHO05D007977 6.3e-11 72.4 57 64.9
Peaxi162Scf00062g01216 Petunia axillaris HOM05D008172 ORTHO05D007977 6.3e-11 72.4 57 64.9
Sopen12g023600 Solanum pennellii HOM05D008172 ORTHO05D007977 6.3e-11 72.4 65 63.1
Solyc12g049150.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 1.1e-10 71.6 65 63.1
CAN.G575.61 Capsicum annuum HOM05D008172 ORTHO05D007977 1.4e-10 71.2 61 63.9
Solyc12g100090.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 1.8e-10 70.9 65 60.0
Sopen12g034700 Solanum pennellii HOM05D008172 ORTHO05D007977 1.8e-10 70.9 68 58.8
Sopen12g034710 Solanum pennellii HOM05D008172 ORTHO05D007977 2.4e-10 70.5 65 61.5
PGSC0003DMG400006489 Solanum tuberosum HOM05D008172 ORTHO05D007977 5.3e-10 69.3 42 73.8
PGSC0003DMG400006490 Solanum tuberosum HOM05D008172 ORTHO05D007977 5.3e-10 69.3 42 73.8
Peaxi162Scf00062g00114 Petunia axillaris HOM05D008172 ORTHO05D007977 1.6e-09 67.8 71 52.1
Sopen12g034720 Solanum pennellii HOM05D008172 ORTHO05D007977 7.7e-09 65.5 65 58.5
Peaxi162Scf00062g01218 Petunia axillaris HOM05D008172 ORTHO05D007977 1.3e-08 64.7 56 58.9
Nitab4.5_0007819g0020 Nicotiana tabacum HOM05D008172 ORTHO05D007977 5.0e-08 62.8 56 62.5
PGSC0003DMG400004446 Solanum tuberosum HOM05D008172 ORTHO05D007977 8.5e-08 62.0 37 70.3
Nitab4.5_0008647g0050 Nicotiana tabacum HOM05D008172 ORTHO05D007977 1.5e-07 61.2 60 60.0
Nitab4.5_0000508g0080 Nicotiana tabacum HOM05D008172 ORTHO05D007977 1.9e-07 60.8 56 60.7
Nitab4.5_0001925g0070 Nicotiana tabacum HOM05D008172 ORTHO05D283996 2.1e-06 57.4 54 59.3


User provided reference genes

Program Settings