Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen12g022950 Solanum pennellii HOM05D008172 ORTHO05D007977 4.6e-34 149.1 247 100.0
Sopen12g022960 Solanum pennellii HOM05D008172 ORTHO05D007977 1.0e-25 121.3 94 84.0
Solyc12g044710.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 1.5e-24 117.5 94 80.9
PGSC0003DMG400006488 Solanum tuberosum HOM05D008172 ORTHO05D007977 4.8e-23 112.5 137 84.7
PGSC0003DMG400023857 Solanum tuberosum HOM05D008172 ORTHO05D007977 4.2e-19 99.4 63 81.0
Sopen12g022940 Solanum pennellii HOM05D008172 ORTHO05D007977 2.1e-18 97.1 70 70.0
Solyc12g049170.2 Solanum lycopersicum HOM05D008172 ORTHO05D007977 2.3e-17 93.6 64 76.6
PGSC0003DMG400011614 Solanum tuberosum HOM05D008172 ORTHO05D007977 3.9e-17 92.8 63 74.6
PGSC0003DMG400023862 Solanum tuberosum HOM05D008172 ORTHO05D007977 3.9e-17 92.8 63 74.6
Sopen12g023640 Solanum pennellii HOM05D008172 ORTHO05D007977 1.1e-16 91.3 64 75.0
Solyc12g049040.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 1.9e-16 90.5 64 75.0
PGSC0003DMG400011600 Solanum tuberosum HOM05D008172 ORTHO05D007977 2.5e-16 90.1 61 75.4
Sopen12g023610 Solanum pennellii HOM05D008172 ORTHO05D007977 4.3e-16 89.4 64 73.4
Solyc12g049160.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 9.6e-16 88.2 64 71.9
Sopen12g023460 Solanum pennellii HOM05D008172 ORTHO05D007977 1.6e-15 87.4 64 71.9
PGSC0003DMG400023856 Solanum tuberosum HOM05D008172 ORTHO05D007977 1.6e-15 87.4 57 77.2
Solyc12g038170.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 2.8e-15 86.7 63 71.4
Solyc12g049070.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 4.8e-15 85.9 64 70.3
Solyc12g049050.2 Solanum lycopersicum HOM05D008172 ORTHO05D007977 6.3e-15 85.5 94 53.2
PGSC0003DMG400023858 Solanum tuberosum HOM05D008172 ORTHO05D007977 8.2e-15 85.1 63 73.0
Solyc12g038240.3 Solanum lycopersicum HOM05D008172 ORTHO05D007977 1.1e-14 84.7 63 69.8
Sopen12g017410 Solanum pennellii HOM05D008172 ORTHO05D007977 1.4e-14 84.3 57 73.7
PGSC0003DMG400011615 Solanum tuberosum HOM05D008172 ORTHO05D007977 1.4e-14 84.3 60 75.0
Sopen12g017900 Solanum pennellii HOM05D000002 ORTHO05D007977 2.4e-14 83.6 55 78.2
Sopen12g018240 Solanum pennellii HOM05D008172 ORTHO05D007977 2.4e-14 83.6 59 72.9
PGSC0003DMG400023861 Solanum tuberosum HOM05D008172 ORTHO05D007977 3.1e-14 83.2 59 71.2
Sopen12g023590 Solanum pennellii HOM05D008172 ORTHO05D007977 9.0e-14 81.6 64 67.2
PGSC0003DMG400011599 Solanum tuberosum HOM05D008172 ORTHO05D007977 9.0e-14 81.6 60 73.3
PGSC0003DMG400023859 Solanum tuberosum HOM05D008172 ORTHO05D007977 9.0e-14 81.6 63 71.4
Sopen12g023620 Solanum pennellii HOM05D008172 ORTHO05D007977 1.2e-13 81.3 60 71.7
Sopen12g023470 Solanum pennellii HOM05D008172 ORTHO05D007977 2.0e-13 80.5 64 67.2
PGSC0003DMG400023855 Solanum tuberosum HOM05D008172 ORTHO05D007977 2.0e-13 80.5 53 77.4
Sopen12g034730 Solanum pennellii HOM05D008172 ORTHO05D007977 3.4e-13 79.7 63 71.4
Sopen12g023450 Solanum pennellii HOM05D008172 ORTHO05D007977 4.5e-13 79.3 56 75.0
Solyc12g049180.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 5.9e-13 79.0 57 75.4
Sopen12g034740 Solanum pennellii HOM05D008172 ORTHO05D007977 7.6e-13 78.6 63 69.8
Peaxi162Scf00062g01212 Petunia axillaris HOM05D008172 ORTHO05D007977 1.0e-12 78.2 57 70.2
Peaxi162Scf00062g01216 Petunia axillaris HOM05D008172 ORTHO05D007977 1.0e-12 78.2 57 70.2
Sopen12g023630 Solanum pennellii HOM05D008172 ORTHO05D007977 1.3e-12 77.8 60 70.0
Solyc12g049090.3 Solanum lycopersicum HOM05D008172 ORTHO05D007977 1.7e-12 77.4 64 67.2
Solyc12g100100.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 1.7e-12 77.4 58 67.2
Solyc12g049140.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 3.8e-12 76.3 64 65.6
Solyc12g100080.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 5.0e-12 75.9 63 68.3
Solyc12g100110.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 5.0e-12 75.9 63 68.3
Solyc12g100090.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 8.4e-12 75.1 63 65.1
Sopen12g034710 Solanum pennellii HOM05D008172 ORTHO05D007977 1.4e-11 74.3 63 66.7
Sopen12g034700 Solanum pennellii HOM05D008172 ORTHO05D007977 2.5e-11 73.6 63 66.7
CAN.G575.61 Capsicum annuum HOM05D008172 ORTHO05D007977 3.2e-11 73.2 63 66.7
Sopen12g023600 Solanum pennellii HOM05D008172 ORTHO05D007977 2.7e-10 70.1 64 64.1
Nitab4.5_0007819g0020 Nicotiana tabacum HOM05D008172 ORTHO05D007977 3.5e-10 69.7 61 63.9
Solyc12g049150.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 4.6e-10 69.3 62 66.1
Sopen12g034720 Solanum pennellii HOM05D008172 ORTHO05D007977 7.9e-10 68.6 63 65.1
Nitab4.5_0008647g0050 Nicotiana tabacum HOM05D008172 ORTHO05D007977 1.8e-09 67.4 60 65.0
Nitab4.5_0000508g0080 Nicotiana tabacum HOM05D008172 ORTHO05D007977 2.3e-09 67.0 56 66.1
Peaxi162Scf00062g00114 Petunia axillaris HOM05D008172 ORTHO05D007977 1.1e-08 64.7 52 61.5
Peaxi162Scf00062g01218 Petunia axillaris HOM05D008172 ORTHO05D007977 1.5e-08 64.3 55 60.0
PGSC0003DMG400006490 Solanum tuberosum HOM05D008172 ORTHO05D007977 4.3e-08 62.8 37 75.7
Nitab4.5_0001925g0070 Nicotiana tabacum HOM05D008172 ORTHO05D283996 3.7e-07 59.7 54 61.1
CAN.G575.57 Capsicum annuum HOM05D008172 ORTHO05D007977 6.3e-07 58.9 46 76.1
PGSC0003DMG400004446 Solanum tuberosum HOM05D008172 ORTHO05D007977 6.3e-07 58.9 37 67.6
Nitab4.5_0006164g0050 Nicotiana tabacum HOM05D008172 ORTHO05D283931 1.1e-06 58.2 53 60.4
PGSC0003DMG400006489 Solanum tuberosum HOM05D008172 ORTHO05D007977 1.8e-06 57.4 37 70.3
Nitab4.5_0001925g0120 Nicotiana tabacum HOM05D008172 ORTHO05D007977 2.4e-06 57.0 45 68.9


User provided reference genes

Program Settings