Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen12g020100 Solanum pennellii HOM05D002209 ORTHO05D004761 8.1e-146 520.4 263 100.0
Solyc12g040500.2 Solanum lycopersicum HOM05D002209 ORTHO05D004761 3.4e-112 408.7 209 99.5
Peaxi162Scf01127g00030 Petunia axillaris HOM05D002209 ORTHO05D004761 1.4e-94 350.1 208 84.6
PGSC0003DMG400015821 Solanum tuberosum HOM05D002209 ORTHO05D004761 8.5e-87 324.3 210 80.5
Peaxi162Scf00683g00231 Petunia axillaris HOM05D002209 ORTHO05D004761 1.9e-86 323.2 210 75.7
PGSC0003DMG402005658 Solanum tuberosum HOM05D002209 ORTHO05D004761 2.8e-82 309.3 210 73.8
Nitab4.5_0001158g0020 Nicotiana tabacum HOM05D002209 ORTHO05D004761 3.7e-82 308.9 210 74.8
Solyc03g119030.4 Solanum lycopersicum HOM05D002209 ORTHO05D004761 1.1e-81 307.4 210 73.3
Sopen03g037920 Solanum pennellii HOM05D002209 ORTHO05D004761 1.8e-81 306.6 210 73.3
CAN.G1129.31 Capsicum annuum HOM05D002209 ORTHO05D004761 1.6e-80 303.5 208 72.6
Nitab4.5_0012369g0030 Nicotiana tabacum HOM05D002209 ORTHO05D004761 4.5e-80 302.0 223 70.9
Nitab4.5_0000150g0110 Nicotiana tabacum HOM05D002209 ORTHO05D004761 1.5e-78 297.0 228 69.7
Dinv24643 Davidia involucrata HOM05D002209 ORTHO05D004761 6.1e-77 291.6 210 69.5
Cc04_g06630 Coffea canephora HOM05D002209 ORTHO05D004761 1.4e-76 290.4 208 68.8
Lj9A421T102 Lonicera japonica HOM05D002209 ORTHO05D004761 1.4e-76 290.4 208 68.3
Dinv29939 Davidia involucrata HOM05D002209 ORTHO05D004761 5.2e-76 288.5 210 68.6
CSS0009925 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 8.8e-76 287.7 210 66.7
CSS0032919 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 8.8e-76 287.7 210 66.7
Nitab4.5_0012395g0010 Nicotiana tabacum HOM05D002209 ORTHO05D004761 2.0e-75 286.6 175 84.0
Oeu017507.1 Olea europaea HOM05D002209 ORTHO05D004761 7.5e-75 284.6 207 69.1
Rhsim07G0079200 Rhododendron simsii HOM05D002209 ORTHO05D004761 6.3e-74 281.6 210 65.2
MSTRG.4560 Avicennia marina HOM05D002209 ORTHO05D004761 3.5e-72 275.8 210 65.7
COL.COLO4_05870 Corchorus olitorius HOM05D002209 ORTHO05D004761 3.5e-72 275.8 205 66.3
RhsimUnG0064800 Rhododendron simsii HOM05D002209 ORTHO05D004761 3.5e-72 275.8 223 61.9
GSVIVG01008394001 Vitis vinifera HOM05D002209 ORTHO05D004761 3.5e-72 275.8 208 65.9
Duzib084G0729 Durio zibethinus HOM05D002209 ORTHO05D004761 7.7e-72 274.6 206 65.0
MSTRG.9285 Avicennia marina HOM05D002209 ORTHO05D004761 1.7e-71 273.5 210 65.2
Gohir.A09G051300 Gossypium hirsutum HOM05D002209 ORTHO05D004761 3.8e-71 272.3 208 64.9
Gohir.D09G052400 Gossypium hirsutum HOM05D002209 ORTHO05D004761 5.0e-71 271.9 208 64.4
Gorai.006G057200 Gossypium raimondii HOM05D002209 ORTHO05D004761 5.0e-71 271.9 208 64.4
Hma1.2p1_0669F.1_g200340 Hydrangea macrophylla HOM05D002209 ORTHO05D004761 6.5e-71 271.6 208 63.0
Prupe.5G229900 Prunus persica HOM05D002209 ORTHO05D004761 6.5e-71 271.6 208 66.3
CSS0022680 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 8.6e-71 271.2 210 64.3
Duzib205G0470 Durio zibethinus HOM05D002209 ORTHO05D004761 1.5e-70 270.4 205 64.4
Duzib068G1457 Durio zibethinus HOM05D002209 ORTHO05D004761 3.2e-70 269.2 234 59.8
PGR083G2774 Punica granatum HOM05D002209 ORTHO05D004761 5.5e-70 268.5 208 63.5
MELO3C017339.2 Cucumis melo HOM05D002209 ORTHO05D004761 2.8e-69 266.2 206 63.1
Thecc.03G048800 Theobroma cacao HOM05D002209 ORTHO05D004761 6.1e-69 265.0 208 62.0
CANSAT80G1163 Cannabis sativa HOM05D002209 ORTHO05D004761 1.0e-68 264.2 209 62.7
CANSAT80G2224 Cannabis sativa HOM05D002209 ORTHO05D004761 1.0e-68 264.2 209 62.7
ClCG06G014470 Citrullus lanatus HOM05D002209 ORTHO05D004761 1.4e-68 263.8 206 62.6
CsaV3_1G004130 Cucumis sativus L. HOM05D002209 ORTHO05D004761 1.8e-68 263.5 206 62.1
DCAR_011382 Daucus carota HOM05D002209 ORTHO05D004761 1.8e-68 263.5 208 61.5
Potri.012G049700 Populus trichocarpa HOM05D002209 ORTHO05D004761 1.8e-68 263.5 207 63.3
Nn4g24077 Nelumbo nucifera HOM05D002209 ORTHO05D004761 2.3e-68 263.1 208 62.0
Potri.015G041700 Populus trichocarpa HOM05D002209 ORTHO05D004761 5.2e-68 261.9 207 62.8
MD14G1233700 Malus domestica HOM05D002209 ORTHO05D004761 8.9e-68 261.2 207 65.7
Sed0027899 Sechium edule HOM05D002209 ORTHO05D004761 8.9e-68 261.2 208 60.1
MD00G1160600 Malus domestica HOM05D002209 ORTHO05D004761 1.2e-67 260.8 208 65.4
ECA246G4025 Erigeron canadensis HOM05D002209 ORTHO05D004761 2.0e-67 260.0 208 60.6
SalBow1G1036 Salvia bowleyana HOM05D002209 ORTHO05D004761 9.8e-67 257.7 207 62.8
TWI81G0085 Tripterygium wilfordii HOM05D002209 ORTHO05D004761 9.8e-67 257.7 205 60.5
Sed0007305 Sechium edule HOM05D002209 ORTHO05D004761 1.3e-66 257.3 206 61.2
Lsat_1_v5_gn_3_1001 Lactuca sativa HOM05D002209 ORTHO05D004761 4.9e-66 255.4 208 59.6
Eucgr.B00855 Eucalyptus grandis HOM05D002209 ORTHO05D004761 1.4e-65 253.8 208 60.6
Lj4g0012439 Lotus japonicus HOM05D002209 ORTHO05D004761 1.4e-65 253.8 208 58.7
Manes.06G008500 Manihot esculenta HOM05D002209 ORTHO05D004761 1.4e-65 253.8 209 60.3
RcHm_v2.0_Chr7g0178801 Rosa chinensis HOM05D002209 ORTHO05D004761 5.4e-65 251.9 208 62.0
Thhalv10020989m.g Eutrema salsugineum HOM05D002209 ORTHO05D004761 9.2e-65 251.1 207 60.9
Atru.chr9.949 Acer truncatum HOM05D002209 ORTHO05D004761 1.2e-64 250.8 208 61.5
HanXRQChr05g0144521 Helianthus annuus HOM05D002209 ORTHO05D004761 5.9e-64 248.4 211 56.9
MBI10_g07297_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D004761 7.8e-64 248.1 207 58.9
CiPaw.16G090800 Carya illinoinensis HOM05D002209 ORTHO05D004761 3.8e-63 245.7 207 60.4
AL3G31330 Arabidopsis lyrata HOM05D002209 ORTHO05D004761 5.0e-63 245.4 207 58.9
Lalb_Chr16g0387141 Lupinus albus HOM05D002209 ORTHO05D004761 1.1e-62 244.2 208 56.2
AT1G48635 Arabidopsis thaliana HOM05D002209 ORTHO05D004761 1.5e-62 243.8 207 58.0
Nn3g18057 Nelumbo nucifera HOM05D002209 ORTHO05D004761 1.5e-62 243.8 210 59.0
AL1G55300 Arabidopsis lyrata HOM05D002209 ORTHO05D004761 1.9e-62 243.4 207 58.0
Carub.0001s3778 Capsella rubella HOM05D002209 ORTHO05D004761 1.9e-62 243.4 207 59.9
Glyma.05G243700 Glycine max HOM05D002209 ORTHO05D004761 3.3e-62 242.7 208 57.7
THA.LOC104821836 Tarenaya hassleriana HOM05D002209 ORTHO05D004761 3.3e-62 242.7 208 58.2
FAN08G3349 Fragaria x ananassa HOM05D002209 ORTHO05D004761 4.3e-62 242.3 208 60.1
Phvul.002G327400 Phaseolus vulgaris HOM05D002209 ORTHO05D004761 4.3e-62 242.3 208 57.2
AT3G18160 Arabidopsis thaliana HOM05D002209 ORTHO05D004761 5.6e-62 241.9 206 57.8
VMungo0251G1482 Vigna mungo HOM05D002209 ORTHO05D004761 5.6e-62 241.9 208 57.7
Migut.D01447 Erythranthe guttata HOM05D002209 ORTHO05D004761 7.3e-62 241.5 208 57.2
FAN04G3108 Fragaria x ananassa HOM05D002209 ORTHO05D004761 7.3e-62 241.5 207 60.4
FvH4_5g17050 Fragaria vesca HOM05D002209 ORTHO05D004761 9.5e-62 241.1 208 59.6
Ciclev10008707m.g Citrus clementina HOM05D002209 ORTHO05D004761 2.1e-61 240.0 208 56.7
FAN18G1515 Fragaria x ananassa HOM05D002209 ORTHO05D004761 2.1e-61 240.0 208 59.6
THA.LOC104820369 Tarenaya hassleriana HOM05D002209 ORTHO05D004761 3.6e-61 239.2 207 57.5
Sp1g35610 Schrenkiella parvula HOM05D002209 ORTHO05D004761 4.7e-61 238.8 207 57.5
Sp3g16270 Schrenkiella parvula HOM05D002209 ORTHO05D004761 8.0e-61 238.0 207 57.5
Aqoxy3G03975 Aquilegia oxysepala HOM05D002209 ORTHO05D004761 1.0e-60 237.7 207 58.5
CARHR093480 Cardamine hirsuta HOM05D002209 ORTHO05D004761 1.0e-60 237.7 207 57.5
FAN13G0599 Fragaria x ananassa HOM05D002209 ORTHO05D004761 1.0e-60 237.7 208 59.1
TPR.G12929 Trifolium pratense HOM05D002209 ORTHO05D004761 1.0e-60 237.7 209 57.4
Medtr8g106780 Medicago truncatula HOM05D002209 ORTHO05D004761 1.4e-60 237.3 209 56.0
PSO782G2563 Papaver somniferum HOM05D002209 ORTHO05D004761 1.4e-60 237.3 207 58.0
Aa31LG8G4990 Aethionema arabicum HOM05D002209 ORTHO05D004761 1.8e-60 236.9 208 56.2
Glyma.08G051500 Glycine max HOM05D002209 ORTHO05D004761 4.0e-60 235.7 208 55.8
Lalb_Chr05g0221871 Lupinus albus HOM05D002209 ORTHO05D004761 4.0e-60 235.7 208 53.8
Lalb_Chr09g0330521 Lupinus albus HOM05D002209 ORTHO05D004761 4.0e-60 235.7 208 54.3
Aa31LG10G5170 Aethionema arabicum HOM05D003754 ORTHO05D004530 6.8e-60 235.0 209 55.0
BcaC08g43072 Brassica carinata HOM05D002209 ORTHO05D004761 1.2e-59 234.2 207 57.5
BcaB07g33725 Brassica carinata HOM05D002209 ORTHO05D004761 1.5e-59 233.8 207 57.5
PSO063G7528 Papaver somniferum HOM05D002209 ORTHO05D004761 1.5e-59 233.8 204 58.3
Sc12g0007380 Simmondsia chinensis HOM05D002209 ORTHO05D004761 1.5e-59 233.8 208 55.3
CSS0012524 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 2.0e-59 233.4 163 69.3
BcaB04g20791 Brassica carinata HOM05D002209 ORTHO05D004761 2.6e-59 233.0 207 57.0
C06p03290 Brassica napus HOM05D002209 ORTHO05D004761 3.4e-59 232.6 207 57.5
CARHR038280 Cardamine hirsuta HOM05D002209 ORTHO05D004761 3.4e-59 232.6 207 56.0
C03p49370 Brassica napus HOM05D002209 ORTHO05D004761 7.5e-59 231.5 207 57.0
BolC3t17231H Brassica oleracea HOM05D002209 ORTHO05D004761 7.5e-59 231.5 207 57.0
BraA03t13213Z Brassica rapa HOM05D002209 ORTHO05D004761 7.5e-59 231.5 207 57.0
Carub.0003s1787 Capsella rubella HOM05D002209 ORTHO05D004761 9.8e-59 231.1 206 56.3
Ca_17220_v3 Cicer arietinum L. HOM05D002209 ORTHO05D004761 9.8e-59 231.1 210 54.8
BcaB04g18980 Brassica carinata HOM05D002209 ORTHO05D004761 2.2e-58 229.9 207 57.0
Actinidia35110 Actinidia chinensis HOM05D002209 ORTHO05D004761 3.7e-58 229.2 168 67.9
A06p04280 Brassica napus HOM05D002209 ORTHO05D004761 3.7e-58 229.2 207 56.5
A03p40560 Brassica napus HOM05D002209 ORTHO05D004761 4.9e-58 228.8 207 56.5
C01p46070 Brassica napus HOM05D002209 ORTHO05D007926 1.1e-57 227.6 208 55.3
Thhalv10011573m.g Eutrema salsugineum HOM05D002209 ORTHO05D004761 1.8e-57 226.9 221 53.4
BcaC09g48771 Brassica carinata HOM05D002209 ORTHO05D004761 2.4e-57 226.5 208 55.3
BolC1t04568H Brassica oleracea HOM05D002209 ORTHO05D007926 2.4e-57 226.5 208 55.3
BraA01t03699Z Brassica rapa HOM05D002209 ORTHO05D007926 2.4e-57 226.5 208 54.8
Hma1.2p1_0669F.1_g200330 Hydrangea macrophylla HOM05D002209 ORTHO05D004761 9.2e-57 224.6 159 67.3
vmacro16528 Vaccinium macrocarpon HOM05D002209 ORTHO05D004761 9.2e-57 224.6 208 57.2
arahy.Tifrunner.gnm1.ann1.6WJC3X Arachis hypogaea HOM05D002209 ORTHO05D004761 1.3e-55 220.7 246 48.0
BolC6t35461H Brassica oleracea HOM05D002209 ORTHO05D004761 3.0e-55 219.5 241 49.4
SHI19025 Sapria himalayana HOM05D002209 ORTHO05D000001 5.0e-55 218.8 207 50.7
CDE02G4061 Ceratophyllum demersum HOM05D002209 ORTHO05D004761 1.5e-54 217.2 208 51.0
Hund22655 Selenicereus undatus HOM05D002209 ORTHO05D004761 5.6e-54 215.3 204 54.4
BraA06t23631Z Brassica rapa HOM05D002209 ORTHO05D004761 7.3e-54 214.9 243 48.1
CSS0005213 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 9.5e-54 214.5 157 66.2
Gohir.D08G140100 Gossypium hirsutum HOM05D002209 ORTHO05D004761 8.0e-53 211.5 159 65.4
Gorai.007G186700 Gossypium raimondii HOM05D002209 ORTHO05D004761 1.4e-52 210.7 159 65.4
Gorai.008G042300 Gossypium raimondii HOM05D002209 ORTHO05D004761 3.1e-52 209.5 159 64.8
MBI16_g47222_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D004761 3.1e-52 209.5 206 51.9
EL10Ac8g19603 Beta vulgaris HOM05D002209 ORTHO05D004761 4.0e-52 209.1 244 46.3
Gorai.004G122400 Gossypium raimondii HOM05D002209 ORTHO05D004761 1.5e-51 207.2 159 64.8
Sabra15G0063000 Salix brachista HOM05D002209 ORTHO05D004761 3.4e-51 206.1 323 39.3
BcaC01g03707 Brassica carinata HOM05D002209 ORTHO05D004761 1.3e-50 204.1 207 52.7
TAR629G1642 Trochodendron aralioides HOM05D002209 ORTHO05D004761 1.4e-49 200.7 154 63.0
HPP92_008203 Vanilla planifolia HOM05D002209 ORTHO05D004761 1.4e-49 200.7 204 47.5
Haze_18790 Corylus avellana HOM05D002209 ORTHO05D004761 1.6e-48 197.2 174 60.3
Sabra15G0055400 Salix brachista HOM05D002209 ORTHO05D004761 1.0e-47 194.5 345 36.5
Gohir.D13G126266 Gossypium hirsutum HOM05D002209 ORTHO05D004761 3.0e-47 193.0 159 62.3
TAR622G1360 Trochodendron aralioides HOM05D002209 ORTHO05D004761 1.6e-45 187.2 154 60.4
Cpa.g.sc3.426 Carica papaya HOM05D002209 ORTHO05D004761 1.5e-43 180.6 154 57.1
Psat7g003880 Pisum sativum HOM05D002209 ORTHO05D004761 2.9e-42 176.4 154 56.5
SGA_v2.0_scaffold171G38932 Striga asiatica HOM05D002209 ORTHO05D004761 1.2e-40 171.0 320 35.9
A01p36240 Brassica napus HOM05D002209 ORTHO05D007926 1.6e-40 170.6 154 55.2
CAN.G197.13 Capsicum annuum HOM05D002209 ORTHO05D004761 3.9e-39 166.0 122 67.2
CSS0050298 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 7.3e-38 161.8 152 56.6
AUR62002654 Chenopodium quinoa HOM05D002209 ORTHO05D004761 1.4e-36 157.5 152 53.3
CSS0034654 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 4.0e-36 156.0 107 68.2
Gorai.008G062000 Gossypium raimondii HOM05D002209 ORTHO05D004761 1.9e-33 147.1 125 58.4
Mapoly0003s0191 Marchantia polymorpha HOM05D002209 ORTHO05D004761 3.9e-31 139.4 210 37.1
MBI16_g47372_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D004761 1.5e-30 137.5 150 50.7
CBR_g38112 Chara braunii HOM05D002209 ORTHO05D004761 3.3e-30 136.3 207 36.7
SEGI_01637 Sequoiadendron giganteum HOM05D002209 ORTHO05D004761 5.6e-30 135.6 175 42.9
AagrBONN_evm.TU.Sc2ySwM_344.1865 Anthoceros agrestis HOM05D002209 ORTHO05D004761 1.6e-29 134.0 229 37.1
SEGI_04696 Sequoiadendron giganteum HOM05D002209 ORTHO05D004761 8.1e-29 131.7 172 41.9
Pp3c24_12050 Physcomitrium patens HOM05D002209 ORTHO05D004761 4.0e-28 129.4 210 37.1
Zm00001eb098030 Zea mays HOM05D002209 ORTHO05D004761 9.0e-28 128.3 152 44.1
Pp3c8_16550 Physcomitrium patens HOM05D002209 ORTHO05D004761 4.4e-27 125.9 215 37.2
Psat0s3278g0200 Pisum sativum HOM05D002209 ORTHO05D004761 1.3e-26 124.4 186 41.9
Pp3c20_5170 Physcomitrium patens HOM05D002209 ORTHO05D004761 6.4e-26 122.1 210 36.2
CSS0016222 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 5.4e-25 119.0 152 45.4
Os09g0314300 Oryza sativa ssp. japonica HOM05D002209 ORTHO05D004761 7.8e-24 115.2 128 46.1
SMO367G0254 Selaginella moellendorffii HOM05D002209 ORTHO05D004761 7.8e-24 115.2 211 32.7
PRCOL_00001207 Prasinoderma coloniale HOM05D006727 ORTHO05D008408 3.2e-17 93.2 211 31.8
AUR62040790 Chenopodium quinoa HOM05D002209 ORTHO05D004761 1.8e-15 87.4 154 35.7
AagrBONN_evm.TU.Sc2ySwM_368.2096 Anthoceros agrestis HOM05D002209 ORTHO05D004761 4.5e-11 72.8 151 34.4
CSS0038011 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 4.9e-10 69.3 44 72.7
CSS0040553 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 4.9e-10 69.3 44 72.7
unitig_0.g802 Utricularia gibba HOM05D002209 ORTHO05D004761 9.3e-09 65.1 44 65.9
QL10p027517 Quercus lobata HOM05D002209 ORTHO05D004761 2.5e-06 57.0 44 52.3


User provided reference genes

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