Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen12g020090 Solanum pennellii HOM05D008672 ORTHO05D010998 3.9e-260 901.0 471 100.0
PGSC0003DMG400015830 Solanum tuberosum HOM05D008672 ORTHO05D010998 7.5e-243 843.6 471 94.1
Sopen03g005210 Solanum pennellii HOM05D008672 ORTHO05D010998 1.2e-102 377.9 465 48.0
PGSC0003DMG400036215 Solanum tuberosum HOM05D008672 ORTHO05D010998 1.1e-71 275.0 314 48.7
PGSC0003DMG400003366 Solanum tuberosum HOM05D008672 ORTHO05D010998 5.3e-63 246.1 313 45.0
PGSC0003DMG400037005 Solanum tuberosum HOM05D008672 ORTHO05D010998 2.6e-62 243.8 404 38.9
PGSC0003DMG400044184 Solanum tuberosum HOM05D008672 ORTHO05D010998 3.8e-61 240.0 245 52.2
PGSC0003DMG400045407 Solanum tuberosum HOM05D008672 ORTHO05D010998 5.8e-54 216.1 283 44.9
Solyc12g040490.1 Solanum lycopersicum HOM05D008672 ORTHO05D010998 3.0e-50 203.8 111 97.3
PGSC0003DMG400045067 Solanum tuberosum HOM05D008672 ORTHO05D010998 3.0e-50 203.8 157 62.4
PGSC0003DMG400027983 Solanum tuberosum HOM05D008672 ORTHO05D010998 5.3e-47 193.0 242 43.4
PGSC0003DMG400044032 Solanum tuberosum HOM05D008672 ORTHO05D010998 2.4e-39 167.5 193 44.6
Sopen08g014190 Solanum pennellii HOM05D008672 ORTHO05D010998 3.7e-32 143.7 152 50.0
PGSC0003DMG400040133 Solanum tuberosum HOM05D008672 ORTHO05D010998 5.0e-29 133.3 192 41.7
PGSC0003DMG400041254 Solanum tuberosum HOM05D008672 ORTHO05D010998 1.2e-27 128.6 113 54.0
PGSC0003DMG400036355 Solanum tuberosum HOM05D008672 ORTHO05D010998 4.7e-27 126.7 210 37.6
PGSC0003DMG400039020 Solanum tuberosum HOM05D008672 ORTHO05D010998 2.2e-21 107.8 210 37.1
PGSC0003DMG400046596 Solanum tuberosum HOM05D008672 ORTHO05D010998 2.9e-21 107.5 166 41.0
Sopen05g016280 Solanum pennellii HOM05D008672 ORTHO05D010407 3.8e-21 107.1 107 45.8
PGSC0003DMG400044999 Solanum tuberosum HOM05D011650 ORTHO05D015191 2.5e-20 104.4 293 28.7
PGSC0003DMG400046030 Solanum tuberosum HOM05D008672 ORTHO05D010998 6.1e-19 99.8 68 67.6
PGSC0003DMG400044565 Solanum tuberosum HOM05D008672 ORTHO05D010998 1.4e-18 98.6 210 33.8
Sopen08g014990 Solanum pennellii HOM05D008672 ORTHO05D010998 4.0e-18 97.1 81 54.3
PGSC0003DMG400044059 Solanum tuberosum HOM05D008672 ORTHO05D010998 9.8e-17 92.4 68 61.8
Sopen06g014140 Solanum pennellii HOM05D011650 ORTHO05D015191 1.3e-16 92.0 269 27.9
PGSC0003DMG400029893 Solanum tuberosum HOM05D008672 ORTHO05D010998 3.1e-15 87.4 218 31.2
PGSC0003DMG400038370 Solanum tuberosum HOM05D008672 ORTHO05D010998 2.7e-14 84.3 161 37.3
Manes.15G146400 Manihot esculenta HOM05D001572 ORTHO05D000585 7.7e-14 82.8 265 25.3
Manes.17G097500 Manihot esculenta HOM05D001572 ORTHO05D000733 3.8e-13 80.5 301 24.6
PGSC0003DMG400046419 Solanum tuberosum HOM05D008672 ORTHO05D010998 5.0e-13 80.1 167 32.9
Sopen09g010600 Solanum pennellii HOM05D000006 ORTHO05D010998 8.5e-13 79.3 111 45.0
PGSC0003DMG400045128 Solanum tuberosum HOM05D008672 ORTHO05D010998 1.1e-12 79.0 157 35.0
PGSC0003DMG400038339 Solanum tuberosum HOM05D008672 ORTHO05D010998 7.2e-12 76.3 121 36.4
Medtr0014s0490 Medicago truncatula HOM05D001572 ORTHO05D000733 6.1e-11 73.2 205 27.3
Medtr8g446580 Medicago truncatula HOM05D001572 ORTHO05D000733 8.0e-11 72.8 244 21.7
Medtr8g446610 Medicago truncatula HOM05D001572 ORTHO05D000733 8.0e-11 72.8 244 21.7
Phvul.005G105100 Phaseolus vulgaris HOM05D005504 ORTHO05D000585 8.0e-11 72.8 215 26.0
Medtr6g472020 Medicago truncatula HOM05D001572 ORTHO05D000733 1.0e-10 72.4 190 23.2
Medtr8g075670 Medicago truncatula HOM05D001572 ORTHO05D000733 1.0e-10 72.4 205 26.8
VMungo0251G2508 Vigna mungo HOM05D000775 ORTHO05D000585 1.8e-10 71.6 221 28.1
Sopen07g008390 Solanum pennellii HOM05D008672 ORTHO05D010998 2.3e-10 71.2 130 36.9
Ca_13547_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 4.0e-10 70.5 218 26.6
PGSC0003DMG400021047 Solanum tuberosum HOM05D008672 ORTHO05D010998 5.2e-10 70.1 156 31.4
Ca_27848_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 8.8e-10 69.3 213 25.8
arahy.Tifrunner.gnm1.ann1.IH7N68 Arachis hypogaea HOM05D001572 ORTHO05D000733 1.5e-09 68.6 182 26.9
Ca_13981_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 1.5e-09 68.6 217 26.7
Phvul.009G238900 Phaseolus vulgaris HOM05D005504 ORTHO05D000585 2.0e-09 68.2 301 23.3
Ca_12137_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 2.6e-09 67.8 216 26.4
Medtr8g469050 Medicago truncatula HOM05D001572 ORTHO05D000733 2.6e-09 67.8 230 20.4
Ca_11746_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 4.4e-09 67.0 201 26.4
Ca_27208_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 4.4e-09 67.0 208 26.0
Medtr1g011357 Medicago truncatula HOM05D001572 ORTHO05D000733 4.4e-09 67.0 249 26.1
Medtr1g011360 Medicago truncatula HOM05D001572 ORTHO05D000733 4.4e-09 67.0 249 26.1
Medtr0611s0030 Medicago truncatula HOM05D001572 ORTHO05D000733 5.7e-09 66.6 285 24.9
Ca_11547_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 1.3e-08 65.5 216 26.4
Ca_13607_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 2.2e-08 64.7 207 24.6
Phvul.009G019700 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 2.2e-08 64.7 292 26.4
Ca_03717_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 4.9e-08 63.5 371 22.4
Ca_07842_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 4.9e-08 63.5 284 25.0
Ca_27759_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 4.9e-08 63.5 332 23.8
Ca_07239_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 6.3e-08 63.2 277 24.5
Glyma.17G252900 Glycine max HOM05D005504 ORTHO05D002688 6.3e-08 63.2 173 25.4
Medtr5g047870 Medicago truncatula HOM05D001572 ORTHO05D000733 6.3e-08 63.2 249 24.9
CAN.G458.22 Capsicum annuum HOM05D000013 ORTHO05D000011 8.3e-08 62.8 121 33.9
Ca_28152_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 8.3e-08 62.8 181 27.1
Ca_07605_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 1.1e-07 62.4 297 24.2
Phvul.010G071400 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 1.1e-07 62.4 219 26.9
Medtr2g064140 Medicago truncatula HOM05D001572 ORTHO05D000733 1.4e-07 62.0 249 24.5
Medtr0043s0140 Medicago truncatula HOM05D001572 ORTHO05D000733 1.8e-07 61.6 224 24.1
Medtr0059s0100 Medicago truncatula HOM05D001572 ORTHO05D000733 1.8e-07 61.6 263 24.0
Medtr0254s0030 Medicago truncatula HOM05D001572 ORTHO05D000733 1.8e-07 61.6 289 24.9
Phvul.006G022100 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 2.4e-07 61.2 176 25.0
CAN.G244.19 Capsicum annuum HOM05D008672 ORTHO05D010998 3.1e-07 60.8 67 44.8
Ca_19124_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 3.1e-07 60.8 300 23.0
Ca_11642_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 4.1e-07 60.5 290 24.1
Sopen05g025240 Solanum pennellii HOM05D008672 ORTHO05D010998 4.1e-07 60.5 62 48.4
Medtr0313s0020 Medicago truncatula HOM05D001572 ORTHO05D000733 7.0e-07 59.7 316 24.4
Medtr0313s0070 Medicago truncatula HOM05D001572 ORTHO05D000733 7.0e-07 59.7 316 24.4
Medtr6g069270 Medicago truncatula HOM05D001572 ORTHO05D000733 7.0e-07 59.7 267 23.6
Phvul.009G207400 Phaseolus vulgaris HOM05D005504 ORTHO05D000585 7.0e-07 59.7 216 24.1
PGSC0003DMG400043781 Solanum tuberosum HOM05D008672 ORTHO05D010998 7.0e-07 59.7 64 46.9
Lalb_Chr07g0191741 Lupinus albus HOM05D000775 ORTHO05D000585 1.2e-06 58.9 190 28.4
Phvul.008G165300 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 1.2e-06 58.9 172 26.2
Medtr0014s0310 Medicago truncatula HOM05D001572 ORTHO05D000733 1.6e-06 58.5 171 26.9
Phvul.009G219600 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 1.6e-06 58.5 180 22.8
Ca_28441_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 2.0e-06 58.2 283 24.0
Sopen04g020270 Solanum pennellii HOM05D000004 ORTHO05D000002 2.0e-06 58.2 57 49.1
PGSC0003DMG400046265 Solanum tuberosum HOM05D008672 ORTHO05D010998 2.0e-06 58.2 135 28.9
Ca_09576_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 2.7e-06 57.8 184 24.5
Ca_14951_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 3.5e-06 57.4 336 23.5
PGSC0003DMG400035861 Solanum tuberosum HOM05D008672 ORTHO05D010998 3.5e-06 57.4 105 29.5
Dinv40376 Davidia involucrata HOM05D008720 ORTHO05D011081 4.5e-06 57.0 125 25.6
Ca_02622_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 5.9e-06 56.6 351 23.4
Ca_20020_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 5.9e-06 56.6 233 24.5
Oeu022699.1 Olea europaea HOM05D007980 ORTHO05D010064 5.9e-06 56.6 137 27.0
Oeu062693.1 Olea europaea HOM05D007980 ORTHO05D010064 5.9e-06 56.6 204 22.1
Phvul.006G011400 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 5.9e-06 56.6 299 22.1
Ca_12795_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 7.7e-06 56.2 227 23.3
Oeu047195.1 Olea europaea HOM05D007980 ORTHO05D010064 7.7e-06 56.2 135 26.7


User provided reference genes

Program Settings