Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen12g019040 Solanum pennellii HOM05D000011 ORTHO05D037288 2.1e-126 455.7 229 100.0
Nitab4.5_0000309g0160 Nicotiana tabacum HOM05D000011 ORTHO05D007164 4.0e-64 248.8 251 56.6
Peaxi162Scf00758g00012 Petunia axillaris HOM05D000011 ORTHO05D007164 1.3e-59 233.8 254 51.2
Nitab4.5_0002781g0050 Nicotiana tabacum HOM05D000011 ORTHO05D007164 2.9e-59 232.6 257 51.4
Nitab4.5_0001689g0060 Nicotiana tabacum HOM05D000011 ORTHO05D007164 4.2e-58 228.8 258 50.8
CAN.G1552.6 Capsicum annuum HOM05D000011 ORTHO05D007164 1.5e-55 220.3 244 52.9
Nitab4.5_0000309g0100 Nicotiana tabacum HOM05D000011 ORTHO05D007164 4.4e-55 218.8 256 50.4
Nitab4.5_0002781g0060 Nicotiana tabacum HOM05D000011 ORTHO05D007164 7.5e-55 218.0 256 50.0
PGSC0003DMG400018619 Solanum tuberosum HOM05D000011 ORTHO05D007164 2.2e-54 216.5 301 45.5
Nitab4.5_0000309g0150 Nicotiana tabacum HOM05D000011 ORTHO05D007164 2.8e-54 216.1 188 59.6
Nitab4.5_0001689g0040 Nicotiana tabacum HOM05D000011 ORTHO05D007164 6.3e-54 214.9 257 50.2
CAN.G681.42 Capsicum annuum HOM05D000011 ORTHO05D007164 9.1e-53 211.1 266 49.6
Peaxi162Scf00067g00026 Petunia axillaris HOM05D000011 ORTHO05D007164 3.5e-52 209.1 246 51.6
Peaxi162Scf00157g01646 Petunia axillaris HOM05D000011 ORTHO05D007164 3.5e-52 209.1 246 51.6
CAN.G375.80 Capsicum annuum HOM05D000011 ORTHO05D007164 3.8e-51 205.7 272 47.4
Peaxi162Scf00286g00530 Petunia axillaris HOM05D000011 ORTHO05D007164 1.9e-50 203.4 251 47.4
Peaxi162Scf00157g01645 Petunia axillaris HOM05D000011 ORTHO05D007164 5.5e-50 201.8 255 48.2
Peaxi162Scf00758g00005 Petunia axillaris HOM05D000011 ORTHO05D007164 1.6e-49 200.3 291 42.6
CAN.G681.49 Capsicum annuum HOM05D000011 ORTHO05D007164 2.3e-48 196.4 256 45.7
Sopen09g026370 Solanum pennellii HOM05D000011 ORTHO05D007164 4.0e-48 195.7 270 44.8
PGSC0003DMG400015588 Solanum tuberosum HOM05D000011 ORTHO05D007164 1.3e-46 190.7 248 46.4
Peaxi162Scf00536g00053 Petunia axillaris HOM05D000011 ORTHO05D007164 4.9e-46 188.7 206 49.5
Nitab4.5_0008390g0030 Nicotiana tabacum HOM05D000011 ORTHO05D007164 1.8e-45 186.8 261 43.3
CAN.G710.24 Capsicum annuum HOM05D000011 ORTHO05D007164 2.4e-45 186.4 247 47.8
PGSC0003DMG400041167 Solanum tuberosum HOM05D000011 ORTHO05D007164 2.4e-45 186.4 224 48.7
PGSC0003DMG400043186 Solanum tuberosum HOM05D000011 ORTHO05D007164 3.2e-45 186.0 157 65.6
Nitab4.5_0008680g0010 Nicotiana tabacum HOM05D000011 ORTHO05D007164 1.6e-44 183.7 250 43.2
CAN.G220.8 Capsicum annuum HOM05D000011 ORTHO05D007164 7.8e-44 181.4 256 43.8
PGSC0003DMG400016601 Solanum tuberosum HOM05D000011 ORTHO05D007164 7.8e-44 181.4 259 45.6
CAN.G681.36 Capsicum annuum HOM05D000011 ORTHO05D007164 1.7e-43 180.3 260 45.0
PGSC0003DMG400006573 Solanum tuberosum HOM05D000011 ORTHO05D007164 1.7e-43 180.3 260 44.6
PGSC0003DMG400020851 Solanum tuberosum HOM05D000011 ORTHO05D007164 5.0e-43 178.7 252 45.2
Nitab4.5_0001689g0080 Nicotiana tabacum HOM05D000011 ORTHO05D007164 6.6e-43 178.3 343 36.7
Nitab4.5_0004585g0070 Nicotiana tabacum HOM05D000011 ORTHO05D016876 7.3e-42 174.9 228 48.7
PGSC0003DMG400006571 Solanum tuberosum HOM05D000011 ORTHO05D007164 1.6e-41 173.7 267 43.4
PGSC0003DMG400006577 Solanum tuberosum HOM05D000011 ORTHO05D007164 1.5e-39 167.2 255 43.9
CAN.G681.45 Capsicum annuum HOM05D000011 ORTHO05D007164 3.4e-39 166.0 259 43.2
CAN.G710.26 Capsicum annuum HOM05D000011 ORTHO05D007164 4.4e-39 165.6 223 47.1
PGSC0003DMG400011897 Solanum tuberosum HOM05D000011 ORTHO05D007164 7.5e-39 164.9 232 44.8
PGSC0003DMG401016602 Solanum tuberosum HOM05D000011 ORTHO05D007164 9.8e-39 164.5 259 43.6
PGSC0003DMG402016602 Solanum tuberosum HOM05D000011 ORTHO05D007164 9.8e-39 164.5 259 43.6
Sopen09g036040 Solanum pennellii HOM05D000011 ORTHO05D007164 3.7e-38 162.5 280 40.4
PGSC0003DMG402006288 Solanum tuberosum HOM05D000011 ORTHO05D007164 2.4e-37 159.8 304 38.8
Solyc09g098130.3 Solanum lycopersicum HOM05D000011 ORTHO05D007164 5.4e-37 158.7 255 41.6
Sopen09g036080 Solanum pennellii HOM05D000011 ORTHO05D007164 1.2e-36 157.5 255 42.0
CAN.G461.5 Capsicum annuum HOM05D000011 ORTHO05D007164 1.6e-36 157.1 234 47.4
Peaxi162Scf00765g00217 Petunia axillaris HOM05D000011 ORTHO05D007164 2.3e-35 153.3 212 42.9
PGSC0003DMG400006570 Solanum tuberosum HOM05D000011 ORTHO05D007164 2.3e-35 153.3 261 41.0
CAN.G681.34 Capsicum annuum HOM05D000011 ORTHO05D007164 6.6e-35 151.8 242 42.6
Solyc09g098100.4 Solanum lycopersicum HOM05D000011 ORTHO05D007164 8.6e-35 151.4 284 38.4
CAN.G681.35 Capsicum annuum HOM05D000011 ORTHO05D007164 3.6e-33 146.0 227 41.9
CAN.G681.50 Capsicum annuum HOM05D000011 ORTHO05D007164 4.7e-33 145.6 256 39.8
PGSC0003DMG400031185 Solanum tuberosum HOM05D000011 ORTHO05D007164 4.0e-32 142.5 177 46.9
PGSC0003DMG400038440 Solanum tuberosum HOM05D000011 ORTHO05D007164 2.0e-31 140.2 186 43.5
Peaxi162Scf00654g00009 Petunia axillaris HOM05D000011 ORTHO05D007164 4.4e-31 139.0 188 44.7
Nitab4.5_0004585g0050 Nicotiana tabacum HOM05D000011 ORTHO05D007164 3.7e-30 136.0 271 35.1
PGSC0003DMG400011898 Solanum tuberosum HOM05D000011 ORTHO05D007164 1.9e-29 133.7 182 46.2
CAN.G706.27 Capsicum annuum HOM05D000011 ORTHO05D007164 1.6e-28 130.6 173 44.5
Nitab4.5_0001689g0070 Nicotiana tabacum HOM05D000011 ORTHO05D016876 4.6e-28 129.0 125 53.6
PGSC0003DMG400020872 Solanum tuberosum HOM05D000011 ORTHO05D007164 1.0e-27 127.9 167 49.1
Solyc09g064690.1 Solanum lycopersicum HOM05D000011 ORTHO05D007164 2.5e-26 123.2 174 44.8
CAN.G710.25 Capsicum annuum HOM05D000011 ORTHO05D007164 4.4e-23 112.5 221 35.7
CAN.G461.2 Capsicum annuum HOM05D000011 ORTHO05D007164 1.9e-21 107.1 131 48.1
CAN.G1310.7 Capsicum annuum HOM05D000011 ORTHO05D115643 1.6e-20 104.0 220 34.1
CAN.G681.47 Capsicum annuum HOM05D000011 ORTHO05D007164 1.3e-19 100.9 162 42.6
Nitab4.5_0005938g0040 Nicotiana tabacum HOM05D000011 ORTHO05D007164 6.6e-19 98.6 138 41.3
Peaxi162Scf00216g00063 Petunia axillaris HOM05D000011 ORTHO05D306622 3.1e-16 89.7 150 38.0
PGSC0003DMG400011193 Solanum tuberosum HOM05D000011 ORTHO05D007164 4.4e-15 85.9 115 50.4
CAN.G681.54 Capsicum annuum HOM05D000011 ORTHO05D007164 1.3e-14 84.3 63 58.7
Peaxi162Scf01366g00017 Petunia axillaris HOM05D000011 ORTHO05D007164 1.7e-14 84.0 226 30.1
CAN.G713.16 Capsicum annuum HOM05D000011 ORTHO05D016876 2.2e-14 83.6 119 42.9
CAN.G48.3 Capsicum annuum HOM05D000011 ORTHO05D007164 8.4e-14 81.6 100 54.0
CAN.G687.14 Capsicum annuum HOM05D000011 ORTHO05D016876 5.4e-13 79.0 225 30.7
Solyc12g038910.1 Solanum lycopersicum HOM05D000011 ORTHO05D037288 5.4e-13 79.0 50 84.0
Nitab4.5_0004466g0030 Nicotiana tabacum HOM05D000011 ORTHO05D284376 4.6e-12 75.9 189 31.2
CAN.G616.14 Capsicum annuum HOM05D000011 ORTHO05D016876 2.3e-11 73.6 71 50.7
CAN.G57.21 Capsicum annuum HOM05D000011 ORTHO05D024769 1.1e-10 71.2 113 38.9
PGSC0003DMG400021986 Solanum tuberosum HOM05D000011 ORTHO05D001721 1.1e-10 71.2 157 30.6
CAN.G1449.18 Capsicum annuum HOM05D000011 ORTHO05D001721 7.3e-10 68.6 164 30.5
CAN.G2179.2 Capsicum annuum HOM05D000011 ORTHO05D001721 9.6e-10 68.2 249 26.1
CAN.G741.39 Capsicum annuum HOM05D000011 ORTHO05D001721 1.3e-09 67.8 258 25.2
CAN.G1268.5 Capsicum annuum HOM05D000011 ORTHO05D001721 2.1e-09 67.0 145 31.7
CAN.G941.25 Capsicum annuum HOM05D000011 ORTHO05D001721 3.6e-09 66.2 247 25.5
Nitab4.5_0002977g0020 Nicotiana tabacum HOM05D000011 ORTHO05D001721 3.6e-09 66.2 199 27.1
CAN.G1343.12 Capsicum annuum HOM05D000011 ORTHO05D001721 4.8e-09 65.9 157 26.8
CAN.G74.34 Capsicum annuum HOM05D000011 ORTHO05D012346 4.8e-09 65.9 241 24.9
PGSC0003DMG400029504 Solanum tuberosum HOM05D000011 ORTHO05D012346 4.8e-09 65.9 230 26.1
CAN.G1440.13 Capsicum annuum HOM05D000011 ORTHO05D001721 6.2e-09 65.5 158 29.7
Nitab4.5_0001735g0160 Nicotiana tabacum HOM05D000011 ORTHO05D001721 6.2e-09 65.5 237 24.9
CAN.G741.37 Capsicum annuum HOM05D000011 ORTHO05D001721 8.1e-09 65.1 213 29.1
CAN.G1440.4 Capsicum annuum HOM05D000011 ORTHO05D001721 1.8e-08 63.9 185 27.6
CAN.G1768.11 Capsicum annuum HOM05D000011 ORTHO05D001721 1.8e-08 63.9 185 27.6
CAN.G3968.1 Capsicum annuum HOM05D000011 ORTHO05D001721 1.8e-08 63.9 185 27.6
Sopen06g003240 Solanum pennellii HOM05D000011 ORTHO05D001721 1.8e-08 63.9 170 28.8
CAN.G241.8 Capsicum annuum HOM05D000011 ORTHO05D001721 3.1e-08 63.2 237 23.2
Nitab4.5_0000777g0180 Nicotiana tabacum HOM05D000011 ORTHO05D001721 3.1e-08 63.2 236 28.0
CAN.G1447.7 Capsicum annuum HOM05D000011 ORTHO05D001721 4.0e-08 62.8 139 30.2
Nitab4.5_0004406g0010 Nicotiana tabacum HOM05D000011 ORTHO05D001721 5.3e-08 62.4 237 25.3
Solyc06g008765.1 Solanum lycopersicum HOM05D000011 ORTHO05D001721 5.3e-08 62.4 175 27.4
Sopen05g026830 Solanum pennellii HOM05D000011 ORTHO05D001721 5.3e-08 62.4 247 27.1
Solyc06g008785.1 Solanum lycopersicum HOM05D000011 ORTHO05D001721 6.9e-08 62.0 176 27.3
PGSC0003DMG400002217 Solanum tuberosum HOM05D000011 ORTHO05D001721 6.9e-08 62.0 239 24.7
CAN.G1447.12 Capsicum annuum HOM05D000011 ORTHO05D001721 9.0e-08 61.6 252 25.8
Nitab4.5_0002977g0140 Nicotiana tabacum HOM05D000011 ORTHO05D001721 9.0e-08 61.6 171 26.3
Nitab4.5_0003180g0070 Nicotiana tabacum HOM05D000011 ORTHO05D001721 9.0e-08 61.6 190 26.8
Nitab4.5_0005135g0040 Nicotiana tabacum HOM05D000011 ORTHO05D001721 9.0e-08 61.6 237 24.1
Nitab4.5_0005135g0060 Nicotiana tabacum HOM05D000011 ORTHO05D001721 9.0e-08 61.6 237 24.1
PGSC0003DMG400031878 Solanum tuberosum HOM05D000011 ORTHO05D001721 9.0e-08 61.6 170 27.6
CAN.G895.19 Capsicum annuum HOM05D000011 ORTHO05D001721 1.2e-07 61.2 249 25.3
Nitab4.5_0002977g0010 Nicotiana tabacum HOM05D000862 ORTHO05D000943 1.5e-07 60.8 190 25.3
CAN.G203.1 Capsicum annuum HOM05D000011 ORTHO05D001721 2.0e-07 60.5 227 27.8
CAN.G895.20 Capsicum annuum HOM05D000011 ORTHO05D001721 2.0e-07 60.5 157 28.0
PGSC0003DMG400029453 Solanum tuberosum HOM05D000011 ORTHO05D012346 2.0e-07 60.5 226 23.9
CAN.G538.12 Capsicum annuum HOM05D000011 ORTHO05D001721 2.6e-07 60.1 235 23.8
Nitab4.5_0005485g0010 Nicotiana tabacum HOM05D000011 ORTHO05D001721 2.6e-07 60.1 155 30.3
Nitab4.5_0021935g0010 Nicotiana tabacum HOM05D000011 ORTHO05D001721 2.6e-07 60.1 150 26.7
Nitab4.5_0003288g0060 Nicotiana tabacum HOM05D000011 ORTHO05D001721 3.4e-07 59.7 149 29.5
Nitab4.5_0012015g0010 Nicotiana tabacum HOM05D000011 ORTHO05D001721 4.4e-07 59.3 157 26.8
CAN.G1443.4 Capsicum annuum HOM05D000011 ORTHO05D001721 5.8e-07 58.9 175 28.6
CAN.G869.10 Capsicum annuum HOM05D000011 ORTHO05D001721 5.8e-07 58.9 154 28.6
Nitab4.5_0003671g0040 Nicotiana tabacum HOM05D000011 ORTHO05D001721 5.8e-07 58.9 237 23.6
Nitab4.5_0009187g0020 Nicotiana tabacum HOM05D000011 ORTHO05D001721 5.8e-07 58.9 196 27.0
CAN.G1574.9 Capsicum annuum HOM05D000011 ORTHO05D001721 7.6e-07 58.5 249 23.7
CAN.G741.16 Capsicum annuum HOM05D000011 ORTHO05D001721 7.6e-07 58.5 178 25.3
Sopen06g003570 Solanum pennellii HOM05D000011 ORTHO05D001721 7.6e-07 58.5 218 24.8
CAN.G1744.6 Capsicum annuum HOM05D000011 ORTHO05D001721 9.9e-07 58.2 171 26.3
CAN.G1744.9 Capsicum annuum HOM05D000011 ORTHO05D001721 1.3e-06 57.8 245 24.9
CAN.G186.40 Capsicum annuum HOM05D000011 ORTHO05D001721 1.7e-06 57.4 243 25.1
Nitab4.5_0000916g0030 Nicotiana tabacum HOM05D000011 ORTHO05D012346 1.7e-06 57.4 245 24.1
Nitab4.5_0002983g0010 Nicotiana tabacum HOM05D000011 ORTHO05D001721 1.7e-06 57.4 157 27.4
CAN.G1449.19 Capsicum annuum HOM05D000011 ORTHO05D001721 2.2e-06 57.0 250 23.6
Nitab4.5_0000295g0070 Nicotiana tabacum HOM05D000011 ORTHO05D001721 2.2e-06 57.0 160 26.2
Nitab4.5_0003836g0010 Nicotiana tabacum HOM05D000011 ORTHO05D001721 2.2e-06 57.0 155 27.7
PGSC0003DMG400020737 Solanum tuberosum HOM05D000011 ORTHO05D001721 2.2e-06 57.0 150 28.0
CAN.G1590.3 Capsicum annuum HOM05D000011 ORTHO05D001721 2.9e-06 56.6 152 28.9
Nitab4.5_0005485g0020 Nicotiana tabacum HOM05D000011 ORTHO05D001721 2.9e-06 56.6 171 25.1
Nitab4.5_0006946g0040 Nicotiana tabacum HOM05D000011 ORTHO05D007164 2.9e-06 56.6 38 71.1
Nitab4.5_0009433g0010 Nicotiana tabacum HOM05D000011 ORTHO05D001721 2.9e-06 56.6 218 21.6
PGSC0003DMG400025512 Solanum tuberosum HOM05D000011 ORTHO05D001721 2.9e-06 56.6 224 25.9
Nitab4.5_0000777g0120 Nicotiana tabacum HOM05D000011 ORTHO05D001721 3.8e-06 56.2 236 24.6
Nitab4.5_0027320g0010 Nicotiana tabacum HOM05D000011 ORTHO05D001721 3.8e-06 56.2 177 23.7
PGSC0003DMG400024338 Solanum tuberosum HOM05D000011 ORTHO05D012346 3.8e-06 56.2 233 24.5
CAN.G1696.2 Capsicum annuum HOM05D000011 ORTHO05D001721 4.9e-06 55.8 177 26.0
Nitab4.5_0007572g0020 Nicotiana tabacum HOM05D000011 ORTHO05D001721 4.9e-06 55.8 157 27.4
Nitab4.5_0007572g0040 Nicotiana tabacum HOM05D000011 ORTHO05D001721 4.9e-06 55.8 163 27.6
Peaxi162Scf49532g00002 Petunia axillaris HOM05D000011 ORTHO05D037288 4.9e-06 55.8 36 75.0
Nitab4.5_0015135g0010 Nicotiana tabacum HOM05D000011 ORTHO05D001721 6.4e-06 55.5 171 24.6
Nitab4.5_0007518g0020 Nicotiana tabacum HOM05D000011 ORTHO05D001721 8.4e-06 55.1 256 23.0
PGSC0003DMG400029462 Solanum tuberosum HOM05D000011 ORTHO05D012346 8.4e-06 55.1 206 25.7


User provided reference genes

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