Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen12g015800 Solanum pennellii HOM05D000107 ORTHO05D012342 1.4e-112 409.8 202 100.0
Sopen10g023130 Solanum pennellii HOM05D000107 ORTHO05D000062 5.1e-59 231.9 174 70.1
Sopen11g021510 Solanum pennellii HOM05D000004 ORTHO05D000002 7.2e-53 211.5 326 44.5
Sopen09g018620 Solanum pennellii HOM05D000107 ORTHO05D009932 7.9e-52 208.0 114 93.0
Sopen07g016840 Solanum pennellii HOM05D000107 ORTHO05D000062 1.7e-49 200.3 142 74.6
Sopen08g007430 Solanum pennellii HOM05D000107 ORTHO05D000062 4.8e-49 198.7 286 46.5
Sopen01g007990 Solanum pennellii HOM05D000107 ORTHO05D012342 1.1e-48 197.6 117 87.2
Sopen03g018530 Solanum pennellii HOM05D000004 ORTHO05D009932 3.1e-48 196.1 115 88.7
Sopen04g019100 Solanum pennellii HOM05D007930 ORTHO05D007166 5.3e-48 195.3 144 70.1
Sopen09g019850 Solanum pennellii HOM05D000107 ORTHO05D000062 1.2e-47 194.1 115 87.0
Sopen01g009930 Solanum pennellii HOM05D000107 ORTHO05D000062 2.0e-47 193.4 115 86.1
Sopen11g018950 Solanum pennellii HOM05D000107 ORTHO05D000062 3.5e-47 192.6 113 88.5
Sopen10g014350 Solanum pennellii HOM05D000107 ORTHO05D000062 7.7e-47 191.4 115 87.0
Sopen06g013740 Solanum pennellii HOM05D000004 ORTHO05D012342 3.8e-46 189.1 139 72.7
Sopen12g016210 Solanum pennellii HOM05D000107 ORTHO05D009932 3.6e-44 182.6 100 88.0
Sopen01g017910 Solanum pennellii HOM05D000107 ORTHO05D000062 2.8e-41 172.9 115 80.0
Sopen09g024560 Solanum pennellii HOM05D000107 ORTHO05D000062 1.1e-40 171.0 102 80.4
Sopen10g011990 Solanum pennellii HOM05D000107 ORTHO05D000062 5.3e-40 168.7 111 71.2
Sopen01g007080 Solanum pennellii HOM05D007930 ORTHO05D000062 3.5e-39 166.0 232 44.0
PGSC0003DMG400042791 Solanum tuberosum HOM05D000107 ORTHO05D012342 1.7e-38 163.7 104 75.0
Sopen06g007740 Solanum pennellii HOM05D000107 ORTHO05D000062 2.5e-37 159.8 102 76.5
Sopen06g007990 Solanum pennellii HOM05D000107 ORTHO05D012342 2.5e-37 159.8 105 75.2
Sopen12g025990 Solanum pennellii HOM05D000004 ORTHO05D000002 2.3e-35 153.3 81 91.4
Sopen01g007220 Solanum pennellii HOM05D000107 ORTHO05D012342 6.8e-35 151.8 91 86.8
Sopen08g014940 Solanum pennellii HOM05D000004 ORTHO05D007166 7.5e-34 148.3 77 92.2
Sopen10g012680 Solanum pennellii HOM05D000107 ORTHO05D012342 2.2e-33 146.7 104 69.2
Sopen07g010680 Solanum pennellii HOM05D007930 ORTHO05D007166 2.7e-31 139.8 89 71.9
Sopen11g023140 Solanum pennellii HOM05D000107 ORTHO05D000062 3.2e-29 132.9 134 60.4
PGSC0003DMG400047214 Solanum tuberosum HOM05D000107 ORTHO05D012342 5.5e-29 132.1 74 89.2
Sopen09g016590 Solanum pennellii HOM05D000107 ORTHO05D012342 6.1e-28 128.6 83 75.9
Sopen01g016040 Solanum pennellii HOM05D000107 ORTHO05D012342 3.7e-25 119.4 76 85.5
Sopen01g021020 Solanum pennellii HOM05D000107 ORTHO05D009932 4.1e-24 115.9 55 94.5
PGSC0003DMG400046730 Solanum tuberosum HOM05D000107 ORTHO05D012342 1.6e-23 114.0 73 75.3
Sopen01g016770 Solanum pennellii HOM05D000107 ORTHO05D012342 7.7e-23 111.7 71 77.5
Sopen05g025940 Solanum pennellii HOM05D000107 ORTHO05D000062 7.7e-23 111.7 149 51.0
Sopen05g026080 Solanum pennellii HOM05D000107 ORTHO05D012342 7.7e-23 111.7 63 85.7
PGSC0003DMG400038122 Solanum tuberosum HOM05D000107 ORTHO05D012342 1.7e-22 110.5 71 80.3
Sopen11g017060 Solanum pennellii HOM05D000107 ORTHO05D012342 4.3e-21 105.9 65 80.0
CAN.G268.5 Capsicum annuum HOM05D034184 ORTHO05D012342 8.0e-20 101.7 125 49.6
Sopen01g016760 Solanum pennellii HOM05D000107 ORTHO05D012342 2.0e-18 97.1 61 75.4
Psat5g250640 Pisum sativum HOM05D008859 ORTHO05D007166 3.4e-18 96.3 88 51.1
PGSC0003DMG400015044 Solanum tuberosum HOM05D000107 ORTHO05D012342 4.4e-18 95.9 85 64.7
PGSC0003DMG400035537 Solanum tuberosum HOM05D000107 ORTHO05D012342 7.5e-18 95.1 65 70.8
Ca_13698_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 1.8e-16 90.5 117 42.7
Lj2g0003377 Lotus japonicus HOM05D000107 ORTHO05D000062 2.0e-15 87.0 114 41.2
Lj4g0021587 Lotus japonicus HOM05D000107 ORTHO05D000062 5.9e-15 85.5 114 40.4
Sopen08g011050 Solanum pennellii HOM05D000107 ORTHO05D000062 1.5e-13 80.9 103 51.5
Sopen12g025620 Solanum pennellii HOM05D007930 ORTHO05D012342 1.9e-13 80.5 47 78.7
Psat3g029000 Pisum sativum HOM05D000107 ORTHO05D000062 7.3e-13 78.6 103 39.8
Psat3g187240 Pisum sativum HOM05D000107 ORTHO05D000062 1.6e-12 77.4 89 43.8
SGA_v2.0_scaffold251G45053 Striga asiatica HOM05D000107 ORTHO05D000062 3.6e-12 76.3 96 35.4
AUR62038913 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.0e-11 74.7 100 41.0
Psat5g082920 Pisum sativum HOM05D008859 ORTHO05D000385 1.4e-11 74.3 83 43.4
AUR62038390 Chenopodium quinoa HOM05D000107 ORTHO05D000062 3.1e-11 73.2 100 41.0
Psat2g072600 Pisum sativum HOM05D000107 ORTHO05D000062 4.0e-11 72.8 89 43.8
Sopen03g014010 Solanum pennellii HOM05D000014 ORTHO05D000016 4.0e-11 72.8 33 97.0
TPR.G25563 Trifolium pratense HOM05D000107 ORTHO05D000062 6.8e-11 72.0 117 33.3
TPR.G35654 Trifolium pratense HOM05D000107 ORTHO05D000062 6.8e-11 72.0 104 36.5
Sopen07g006310 Solanum pennellii HOM05D000107 ORTHO05D014265 1.5e-10 70.9 115 36.5
Sopen07g013940 Solanum pennellii HOM05D000107 ORTHO05D000062 1.5e-10 70.9 149 41.6
AUR62032945 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.0e-10 70.5 100 39.0
AUR62034026 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.0e-10 70.5 101 37.6
SGA_v2.0_scaffold11G05530 Striga asiatica HOM05D000107 ORTHO05D000062 2.0e-10 70.5 91 38.5
Sopen01g006480 Solanum pennellii HOM05D000107 ORTHO05D000062 2.6e-10 70.1 105 40.0
AUR62038387 Chenopodium quinoa HOM05D000107 ORTHO05D000062 3.4e-10 69.7 100 40.0
SGA_v2.0_scaffold28G12020 Striga asiatica HOM05D000107 ORTHO05D000062 3.4e-10 69.7 91 38.5
AUR62028444 Chenopodium quinoa HOM05D000107 ORTHO05D000062 4.4e-10 69.3 100 38.0
AUR62040733 Chenopodium quinoa HOM05D000107 ORTHO05D000062 4.4e-10 69.3 100 38.0
ECA232G1773 Erigeron canadensis HOM05D000034 ORTHO05D000037 4.4e-10 69.3 87 36.8
Sopen11g019250 Solanum pennellii HOM05D000107 ORTHO05D014265 5.8e-10 68.9 84 42.9
Sopen07g010120 Solanum pennellii HOM05D000014 ORTHO05D000016 7.5e-10 68.6 33 90.9
Sopen11g012950 Solanum pennellii HOM05D007930 ORTHO05D007166 7.5e-10 68.6 33 90.9
Psat5g015840 Pisum sativum HOM05D008859 ORTHO05D007166 1.3e-09 67.8 37 73.0
Sopen02g002150 Solanum pennellii HOM05D000107 ORTHO05D000062 1.3e-09 67.8 48 68.8
SGA_v2.0_scaffold623G53233 Striga asiatica HOM05D000107 ORTHO05D000062 1.3e-09 67.8 91 36.3
AUR62015626 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.7e-09 67.4 113 37.2
Sopen07g016830 Solanum pennellii HOM05D007930 ORTHO05D007166 1.7e-09 67.4 33 90.9
Sopen09g017090 Solanum pennellii HOM05D007930 ORTHO05D009932 1.7e-09 67.4 33 87.9
Sopen12g016200 Solanum pennellii HOM05D007930 ORTHO05D007166 2.9e-09 66.6 69 52.2
Sopen03g027010 Solanum pennellii HOM05D000107 ORTHO05D014265 3.7e-09 66.2 120 36.7
Sopen10g014330 Solanum pennellii HOM05D000107 ORTHO05D000062 3.7e-09 66.2 36 88.9
Sopen10g018630 Solanum pennellii HOM05D007930 ORTHO05D007166 3.7e-09 66.2 71 52.1
ECA232G1845 Erigeron canadensis HOM05D000107 ORTHO05D000062 4.9e-09 65.9 113 31.9
ECA248G0231 Erigeron canadensis HOM05D000107 ORTHO05D000062 6.4e-09 65.5 113 32.7
Sopen08g008350 Solanum pennellii HOM05D007930 ORTHO05D007166 6.4e-09 65.5 34 88.2
TAR634G0002 Trochodendron aralioides HOM05D000107 ORTHO05D000062 6.4e-09 65.5 106 37.7
Sopen02g004240 Solanum pennellii HOM05D000107 ORTHO05D000062 8.3e-09 65.1 105 36.2
Sopen03g013860 Solanum pennellii HOM05D000004 ORTHO05D007166 8.3e-09 65.1 33 84.8
Sopen12g014820 Solanum pennellii HOM05D000107 ORTHO05D000062 8.3e-09 65.1 105 38.1
PSO566G0060 Papaver somniferum HOM05D000107 ORTHO05D000062 1.1e-08 64.7 98 38.8
AUR62036835 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.9e-08 63.9 120 35.0
Rhsim02G0220700 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.9e-08 63.9 82 45.1
Sopen01g024250 Solanum pennellii HOM05D000004 ORTHO05D000002 2.4e-08 63.5 32 84.4
Sopen05g023010 Solanum pennellii HOM05D007477 ORTHO05D002065 2.4e-08 63.5 32 84.4
Sopen08g014180 Solanum pennellii HOM05D000004 ORTHO05D000002 2.4e-08 63.5 32 84.4
Rhsim06G0085100 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.1e-08 62.8 82 45.1
Rhsim08G0137300 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.1e-08 62.8 82 45.1
Sopen07g008590 Solanum pennellii HOM05D000004 ORTHO05D000002 4.1e-08 62.8 32 81.2
SGA_v2.0_scaffold174G39225 Striga asiatica HOM05D000107 ORTHO05D000062 4.1e-08 62.8 100 39.0
SGA_v2.0_scaffold279G46790 Striga asiatica HOM05D000107 ORTHO05D000062 4.1e-08 62.8 93 37.6
Sopen07g016070 Solanum pennellii HOM05D000004 ORTHO05D000034 5.4e-08 62.4 32 78.1
Sopen11g007930 Solanum pennellii HOM05D000107 ORTHO05D000062 5.4e-08 62.4 48 62.5
Sopen06g014310 Solanum pennellii HOM05D000002 ORTHO05D000001 7.0e-08 62.0 30 86.7
AUR62043742 Chenopodium quinoa HOM05D000107 ORTHO05D000062 9.2e-08 61.6 89 38.2
Sopen02g001050 Solanum pennellii HOM05D007930 ORTHO05D007166 9.2e-08 61.6 47 66.0
AUR62042513 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.2e-07 61.2 89 38.2
Rhsim13G0141700 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.2e-07 61.2 82 40.2
Sopen08g019930 Solanum pennellii HOM05D000107 ORTHO05D000062 1.2e-07 61.2 120 35.0
Sopen12g015810 Solanum pennellii HOM05D007930 ORTHO05D007166 1.6e-07 60.8 33 81.8
AUR62041527 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.0e-07 60.5 88 38.6
Psat3g052720 Pisum sativum HOM05D009811 ORTHO05D007166 2.0e-07 60.5 117 35.0
Sopen01g018630 Solanum pennellii HOM05D000004 ORTHO05D009932 2.0e-07 60.5 32 81.2
AUR62040855 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.7e-07 60.1 58 50.0
Sopen03g023820 Solanum pennellii HOM05D000004 ORTHO05D009932 2.7e-07 60.1 32 81.2
TAR541G0002 Trochodendron aralioides HOM05D000107 ORTHO05D000062 2.7e-07 60.1 103 38.8
AUR62042100 Chenopodium quinoa HOM05D000107 ORTHO05D000062 3.5e-07 59.7 58 50.0
EL10Ac5g11812 Beta vulgaris HOM05D000107 ORTHO05D000062 4.6e-07 59.3 54 48.1
PSO213G0001 Papaver somniferum HOM05D000107 ORTHO05D000062 4.6e-07 59.3 113 36.3
Sopen08g009350 Solanum pennellii HOM05D007930 ORTHO05D007166 4.6e-07 59.3 51 62.7
Sopen06g005350 Solanum pennellii HOM05D000004 ORTHO05D000034 6.0e-07 58.9 47 57.4
AUR62036640 Chenopodium quinoa HOM05D000107 ORTHO05D000062 7.8e-07 58.5 102 34.3
Atru.chr1.768 Acer truncatum HOM05D000107 ORTHO05D000062 1.0e-06 58.2 100 39.0
AUR62029024 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.0e-06 58.2 113 34.5
Sopen06g014270 Solanum pennellii HOM05D000107 ORTHO05D014265 1.0e-06 58.2 107 33.6
Sopen07g016040 Solanum pennellii HOM05D008562 ORTHO05D009932 1.3e-06 57.8 36 69.4
TAR003G0008 Trochodendron aralioides HOM05D000107 ORTHO05D000062 1.3e-06 57.8 114 33.3
CSS0000324 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.7e-06 57.4 86 37.2
AUR62029908 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.7e-06 57.4 99 36.4
Sopen05g012350 Solanum pennellii HOM05D000014 ORTHO05D000093 1.7e-06 57.4 32 78.1
Sopen05g024480 Solanum pennellii HOM05D007930 ORTHO05D007166 1.7e-06 57.4 47 59.6
Atru.chr4.2612 Acer truncatum HOM05D000107 ORTHO05D000062 2.3e-06 57.0 100 38.0
AUR62018241 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.3e-06 57.0 84 39.3
Sopen05g024380 Solanum pennellii HOM05D008562 ORTHO05D009932 2.3e-06 57.0 32 78.1
Sopen05g027090 Solanum pennellii HOM05D000014 ORTHO05D000093 2.3e-06 57.0 33 75.8
TAR165G0003 Trochodendron aralioides HOM05D000107 ORTHO05D000062 2.3e-06 57.0 117 31.6
Sopen07g006880 Solanum pennellii HOM05D008562 ORTHO05D009932 3.0e-06 56.6 34 73.5
AUR62024349 Chenopodium quinoa HOM05D000107 ORTHO05D000062 3.9e-06 56.2 58 48.3
AUR62033022 Chenopodium quinoa HOM05D000107 ORTHO05D000062 3.9e-06 56.2 127 33.1
Sopen04g013980 Solanum pennellii HOM05D000004 ORTHO05D009932 3.9e-06 56.2 32 75.0
Sopen05g017480 Solanum pennellii HOM05D000004 ORTHO05D009932 3.9e-06 56.2 32 75.0
Sopen05g018430 Solanum pennellii HOM05D000014 ORTHO05D000016 3.9e-06 56.2 32 75.0
Sopen08g010840 Solanum pennellii HOM05D008562 ORTHO05D009932 3.9e-06 56.2 32 75.0
Sopen09g012630 Solanum pennellii HOM05D008562 ORTHO05D009932 3.9e-06 56.2 32 75.0
Sopen12g018700 Solanum pennellii HOM05D008562 ORTHO05D009932 3.9e-06 56.2 32 75.0
CSS0004309 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.0e-06 55.8 86 37.2
AUR62014956 Chenopodium quinoa HOM05D000107 ORTHO05D000062 5.0e-06 55.8 71 42.3
MBI19_g18418_MAGBIO Magnolia biondii HOM05D000107 ORTHO05D000062 5.0e-06 55.8 39 61.5
PSO541G3876 Papaver somniferum HOM05D000107 ORTHO05D000062 5.0e-06 55.8 98 32.7
Rhsim01G0104600 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.0e-06 55.8 57 47.4
Sopen06g013750 Solanum pennellii HOM05D007930 ORTHO05D007166 5.0e-06 55.8 26 92.3
AUR62005778 Chenopodium quinoa HOM05D000107 ORTHO05D000062 6.6e-06 55.5 38 60.5
Sopen05g026280 Solanum pennellii HOM05D000047 ORTHO05D000044 6.6e-06 55.5 35 74.3
CAN.G54.14 Capsicum annuum HOM05D034184 ORTHO05D012342 8.6e-06 55.1 42 59.5


User provided reference genes

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