Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen12g012330 Solanum pennellii HOM05D008032 ORTHO05D006370 1.7e-268 928.7 440 100.0
Sopen09g001430 Solanum pennellii HOM05D000003 ORTHO05D000004 9.7e-152 540.8 401 69.3
Solyc09g005450.1 Solanum lycopersicum HOM05D008032 ORTHO05D006370 6.1e-138 495.0 284 84.5
PGSC0003DMG400034627 Solanum tuberosum HOM05D008032 ORTHO05D006370 5.3e-57 226.1 371 35.6
PGSC0003DMG400019954 Solanum tuberosum HOM05D002612 ORTHO05D002859 3.8e-55 219.9 408 34.1
PGSC0003DMG400036183 Solanum tuberosum HOM05D008032 ORTHO05D006370 3.8e-55 219.9 408 34.1
PGSC0003DMG400036968 Solanum tuberosum HOM05D008032 ORTHO05D006370 3.8e-55 219.9 408 34.1
Nitab4.5_0000317g0230 Nicotiana tabacum HOM05D008032 ORTHO05D007704 8.2e-50 202.2 195 46.7
PGSC0003DMG400014412 Solanum tuberosum HOM05D008032 ORTHO05D006370 9.7e-35 152.1 166 45.2
Solyc03g033830.2 Solanum lycopersicum HOM05D033312 ORTHO05D006370 3.8e-31 140.2 136 45.6
PGSC0003DMG400019828 Solanum tuberosum HOM05D008032 ORTHO05D006370 4.4e-27 126.7 245 29.0
PGSC0003DMG400037701 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.2e-24 118.6 244 29.1
Solyc04g049380.4 Solanum lycopersicum HOM05D000290 ORTHO05D007415 6.5e-23 112.8 167 31.1
Peaxi162Scf00386g00616 Petunia axillaris HOM05D001137 ORTHO05D005066 3.2e-22 110.5 169 32.5
PGSC0003DMG400026721 Solanum tuberosum HOM05D008032 ORTHO05D006370 9.4e-22 109.0 257 26.8
Sopen11g019660 Solanum pennellii HOM05D000003 ORTHO05D000004 1.6e-21 108.2 114 59.6
Sopen03g006580 Solanum pennellii HOM05D033312 ORTHO05D006370 2.7e-21 107.5 100 45.0
Peaxi162Scf01129g00001 Petunia axillaris HOM05D008032 ORTHO05D006370 1.0e-20 105.5 149 38.3
PGSC0003DMG400038517 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.0e-20 105.5 174 32.2
PGSC0003DMG400023816 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.8e-20 104.8 151 31.1
Dinv04832 Davidia involucrata HOM05D012569 ORTHO05D006370 3.0e-20 104.0 201 27.9
PGSC0003DMG400046683 Solanum tuberosum HOM05D008032 ORTHO05D006370 4.0e-20 103.6 219 29.2
Dinv13641 Davidia involucrata HOM05D010100 ORTHO05D006370 6.7e-20 102.8 158 31.6
Dinv08590 Davidia involucrata HOM05D010100 ORTHO05D006370 4.4e-19 100.1 158 31.6
Dinv36988 Davidia involucrata HOM05D010100 ORTHO05D006370 4.4e-19 100.1 201 28.4
CAN.G530.3 Capsicum annuum HOM05D008032 ORTHO05D006370 5.7e-19 99.8 222 26.6
PGSC0003DMG400008733 Solanum tuberosum HOM05D008877 ORTHO05D006370 4.8e-18 96.7 172 29.1
Actinidia06679 Actinidia chinensis HOM05D000314 ORTHO05D000189 1.1e-17 95.5 193 30.6
Dinv09219 Davidia involucrata HOM05D010100 ORTHO05D006370 1.1e-17 95.5 180 30.0
Dinv07635 Davidia involucrata HOM05D003048 ORTHO05D003418 2.4e-17 94.4 180 30.0
PGSC0003DMG400044383 Solanum tuberosum HOM05D008032 ORTHO05D006370 2.4e-17 94.4 140 33.6
PGSC0003DMG400023777 Solanum tuberosum HOM05D008032 ORTHO05D006370 4.1e-17 93.6 139 31.7
PGSC0003DMG400047165 Solanum tuberosum HOM05D008032 ORTHO05D006370 4.1e-17 93.6 124 31.5
Peaxi162Scf00480g00047 Petunia axillaris HOM05D008032 ORTHO05D006370 1.6e-16 91.7 182 28.0
Solyc01g060160.1 Solanum lycopersicum HOM05D008877 ORTHO05D006370 5.9e-16 89.7 239 24.7
Dinv04932 Davidia involucrata HOM05D010100 ORTHO05D006370 6.5e-15 86.3 127 36.2
SHI23486 Sapria himalayana HOM05D006502 ORTHO05D007704 1.9e-14 84.7 146 31.5
SEGI_28023 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 1.2e-13 82.0 154 27.9
PGSC0003DMG402010693 Solanum tuberosum HOM05D008032 ORTHO05D006370 4.7e-13 80.1 139 29.5
SEGI_19865 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 6.1e-13 79.7 161 28.6
SEGI_36704 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 6.1e-13 79.7 135 29.6
Sopen06g008270 Solanum pennellii HOM05D000003 ORTHO05D000004 6.1e-13 79.7 205 30.2
SHI09511 Sapria himalayana HOM05D000003 ORTHO05D000004 1.4e-12 78.6 170 27.1
PGSC0003DMG400005369 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.4e-12 78.6 83 39.8
SEGI_09276 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 3.0e-12 77.4 200 26.5
PGSC0003DMG400014630 Solanum tuberosum HOM05D008877 ORTHO05D006370 3.0e-12 77.4 102 36.3
PGSC0003DMG400021934 Solanum tuberosum HOM05D008877 ORTHO05D006370 3.0e-12 77.4 80 38.8
Dinv30257 Davidia involucrata HOM05D001880 ORTHO05D004730 4.0e-12 77.0 268 22.0
Dinv03792 Davidia involucrata HOM05D012569 ORTHO05D006370 5.2e-12 76.6 103 33.0
SHI26093 Sapria himalayana HOM05D000003 ORTHO05D000004 6.8e-12 76.3 143 28.0
SEGI_22475 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 6.8e-12 76.3 157 26.8
Dinv10200 Davidia involucrata HOM05D008877 ORTHO05D006370 1.2e-11 75.5 93 36.6
Dinv38437 Davidia involucrata HOM05D008877 ORTHO05D006370 1.2e-11 75.5 93 36.6
Dinv07139 Davidia involucrata HOM05D010100 ORTHO05D006370 1.5e-11 75.1 174 27.6
SEGI_27095 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 5.7e-11 73.2 259 23.9
PGSC0003DMG400004492 Solanum tuberosum HOM05D008877 ORTHO05D006370 5.7e-11 73.2 110 30.0
GSVIVG01002904001 Vitis vinifera HOM05D001447 ORTHO05D006370 7.5e-11 72.8 146 27.4
PSO170G4380 Papaver somniferum HOM05D000054 ORTHO05D304627 1.3e-10 72.0 117 29.9
SEGI_22082 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 1.3e-10 72.0 161 28.0
SEGI_19090 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 1.7e-10 71.6 146 31.5
SEGI_27002 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 2.2e-10 71.2 183 28.4
SEGI_28787 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 2.2e-10 71.2 183 28.4
SEGI_32181 Sequoiadendron giganteum HOM05D002670 ORTHO05D003079 2.2e-10 71.2 130 28.5
Nitab4.5_0009871g0020 Nicotiana tabacum HOM05D008032 ORTHO05D006370 2.8e-10 70.9 86 38.4
SEGI_08743 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 2.8e-10 70.9 136 26.5
GSVIVG01020820001 Vitis vinifera HOM05D001610 ORTHO05D006370 2.8e-10 70.9 203 25.1
Solyc03g058490.1 Solanum lycopersicum HOM05D008032 ORTHO05D006370 3.7e-10 70.5 46 60.9
Nitab4.5_0005403g0010 Nicotiana tabacum HOM05D006502 ORTHO05D007704 6.3e-10 69.7 124 33.1
SEGI_30688 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 6.3e-10 69.7 164 28.0
PGSC0003DMG400043378 Solanum tuberosum HOM05D008877 ORTHO05D006370 8.3e-10 69.3 106 32.1
PGSC0003DMG400014749 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.4e-09 68.6 85 35.3
GSVIVG01031689001 Vitis vinifera HOM05D008877 ORTHO05D007704 1.4e-09 68.6 174 26.4
COL.COLO4_32164 Corchorus olitorius HOM05D000003 ORTHO05D000007 1.8e-09 68.2 130 26.9
Rhsim10G0065700 Rhododendron simsii HOM05D008877 ORTHO05D006370 1.8e-09 68.2 78 34.6
vmacro06198 Vaccinium macrocarpon HOM05D000522 ORTHO05D004380 3.1e-09 67.4 145 29.0
SEGI_10680 Sequoiadendron giganteum HOM05D001800 ORTHO05D000239 4.1e-09 67.0 169 27.8
SEGI_23878 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 4.1e-09 67.0 134 31.3
PGSC0003DMG400011942 Solanum tuberosum HOM05D008877 ORTHO05D006370 5.4e-09 66.6 70 37.1
GSVIVG01016338001 Vitis vinifera HOM05D004699 ORTHO05D005668 5.4e-09 66.6 118 32.2
SEGI_11388 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 7.0e-09 66.2 165 27.3
SEGI_39899 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 7.0e-09 66.2 173 26.6
GSVIVG01026409001 Vitis vinifera HOM05D006671 ORTHO05D008637 7.0e-09 66.2 74 36.5
Nitab4.5_0001171g0070 Nicotiana tabacum HOM05D006502 ORTHO05D007704 9.1e-09 65.9 313 24.0
SEGI_25522 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 9.1e-09 65.9 185 26.5
SEGI_28949 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 9.1e-09 65.9 133 30.1
Solyc06g036555.1 Solanum lycopersicum HOM05D000017 ORTHO05D006370 9.1e-09 65.9 91 33.0
GSVIVG01013566001 Vitis vinifera HOM05D001792 ORTHO05D001821 9.1e-09 65.9 112 30.4
SEGI_21449 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 1.2e-08 65.5 181 27.1
SEGI_01101 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 1.6e-08 65.1 136 25.7
SEGI_31706 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 1.6e-08 65.1 137 26.3
GSVIVG01034263001 Vitis vinifera HOM05D008877 ORTHO05D007704 1.6e-08 65.1 151 24.5
CSS0034567 Camellia sinensis var. sinensis HOM05D028315 ORTHO05D007704 2.7e-08 64.3 120 25.8
Dinv32194 Davidia involucrata HOM05D000121 ORTHO05D001726 2.7e-08 64.3 68 35.3
SEGI_39525 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 2.7e-08 64.3 188 25.5
SEGI_27275 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 3.5e-08 63.9 127 28.3
SEGI_36681 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 3.5e-08 63.9 137 24.8
CSS0008775 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 4.5e-08 63.5 148 24.3
PSO832G0078 Papaver somniferum HOM05D002180 ORTHO05D001339 4.5e-08 63.5 97 33.0
SEGI_26359 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 4.5e-08 63.5 154 28.6
SEGI_16593 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 5.9e-08 63.2 145 28.3
SEGI_19942 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 5.9e-08 63.2 145 28.3
Dinv06002 Davidia involucrata HOM05D010100 ORTHO05D006370 7.7e-08 62.8 156 25.6
PSO541G0300 Papaver somniferum HOM05D000054 ORTHO05D000171 7.7e-08 62.8 142 28.9
SEGI_21523 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 7.7e-08 62.8 154 28.6
SEGI_29127 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 7.7e-08 62.8 184 22.8
Nn5g28355 Nelumbo nucifera HOM05D023818 ORTHO05D022948 1.0e-07 62.4 97 34.0
SEGI_00742 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 1.0e-07 62.4 201 27.4
SEGI_03474 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 1.0e-07 62.4 168 28.0
SEGI_33152 Sequoiadendron giganteum HOM05D001079 ORTHO05D000945 1.0e-07 62.4 207 26.6
Medtr2g438650 Medicago truncatula HOM05D001538 ORTHO05D000007 1.3e-07 62.0 148 29.1
SEGI_07120 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 1.3e-07 62.0 136 26.5
SEGI_24432 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 1.7e-07 61.6 127 29.1
SEGI_10348 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 2.2e-07 61.2 188 24.5
SEGI_00109 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 2.9e-07 60.8 127 26.0
SEGI_28668 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 2.9e-07 60.8 133 28.6
AUR62040080 Chenopodium quinoa HOM05D000003 ORTHO05D000126 3.8e-07 60.5 114 31.6
SEGI_20422 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 3.8e-07 60.5 146 26.7
vmacro08911 Vaccinium macrocarpon HOM05D000003 ORTHO05D000006 3.8e-07 60.5 109 33.0
RhsimUnG0010100 Rhododendron simsii HOM05D000003 ORTHO05D000126 5.0e-07 60.1 123 29.3
SEGI_01577 Sequoiadendron giganteum HOM05D000003 ORTHO05D000007 5.0e-07 60.1 119 25.2
SEGI_03706 Sequoiadendron giganteum HOM05D002714 ORTHO05D003085 5.0e-07 60.1 124 28.2
SEGI_37380 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 5.0e-07 60.1 174 26.4
Aqoxy5G03272 Aquilegia oxysepala HOM05D000024 ORTHO05D000007 6.5e-07 59.7 125 28.0
PSO724G1272 Papaver somniferum HOM05D000054 ORTHO05D303564 6.5e-07 59.7 139 29.5
SEGI_01720 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 6.5e-07 59.7 127 26.0
Medtr1g024800 Medicago truncatula HOM05D002777 ORTHO05D001516 8.5e-07 59.3 82 39.0
Rhsim04G0149900 Rhododendron simsii HOM05D000003 ORTHO05D000007 8.5e-07 59.3 127 31.5
SEGI_05837 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 8.5e-07 59.3 133 28.6
SEGI_19698 Sequoiadendron giganteum HOM05D002752 ORTHO05D000007 8.5e-07 59.3 124 25.0
SEGI_22677 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 8.5e-07 59.3 146 24.0
Actinidia34609 Actinidia chinensis HOM05D002632 ORTHO05D002881 1.1e-06 58.9 143 23.1
MELO3C004331.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.1e-06 58.9 109 32.1
SEGI_12202 Sequoiadendron giganteum HOM05D000003 ORTHO05D000007 1.1e-06 58.9 119 25.2
SEGI_15039 Sequoiadendron giganteum HOM05D000003 ORTHO05D000007 1.1e-06 58.9 103 29.1
SEGI_24244 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 1.1e-06 58.9 106 27.4
SEGI_31837 Sequoiadendron giganteum HOM05D002752 ORTHO05D000007 1.1e-06 58.9 126 31.0
COL.COLO4_13796 Corchorus olitorius HOM05D000003 ORTHO05D000007 1.5e-06 58.5 112 26.8
SEGI_39617 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 1.5e-06 58.5 100 31.0
PSO017G5897 Papaver somniferum HOM05D000003 ORTHO05D000007 1.9e-06 58.2 114 27.2
SEGI_06256 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 1.9e-06 58.2 146 24.7
SEGI_30625 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 1.9e-06 58.2 146 24.7
SEGI_34171 Sequoiadendron giganteum HOM05D002752 ORTHO05D000007 1.9e-06 58.2 157 22.3
PGSC0003DMG400041897 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.9e-06 58.2 78 29.5
PSO513G0047 Papaver somniferum HOM05D000054 ORTHO05D000452 2.5e-06 57.8 140 25.7
SEGI_18767 Sequoiadendron giganteum HOM05D000003 ORTHO05D000007 2.5e-06 57.8 110 28.2
SEGI_34456 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 2.5e-06 57.8 140 30.0
Aa31sc1015G10 Aethionema arabicum HOM05D000496 ORTHO05D000411 3.2e-06 57.4 125 30.4
Nn1g06939 Nelumbo nucifera HOM05D000003 ORTHO05D000007 3.2e-06 57.4 101 31.7
SEGI_01135 Sequoiadendron giganteum HOM05D002752 ORTHO05D000007 3.2e-06 57.4 128 26.6
SEGI_01795 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 3.2e-06 57.4 82 39.0
SEGI_29529 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 3.2e-06 57.4 84 36.9
Thecc.07G067600 Theobroma cacao HOM05D023671 ORTHO05D001516 3.2e-06 57.4 124 29.8
TPR.G23335 Trifolium pratense HOM05D000003 ORTHO05D000007 3.2e-06 57.4 106 23.6
vmacro01896 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 3.2e-06 57.4 69 40.6
Dinv02985 Davidia involucrata HOM05D005440 ORTHO05D034043 4.2e-06 57.0 88 36.4
Phvul.005G026500 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 4.2e-06 57.0 87 36.8
SEGI_25627 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 4.2e-06 57.0 119 29.4
SEGI_30987 Sequoiadendron giganteum HOM05D000003 ORTHO05D000007 4.2e-06 57.0 109 29.4
Actinidia13099 Actinidia chinensis HOM05D000003 ORTHO05D000007 5.5e-06 56.6 114 31.6
PGSC0003DMG400045208 Solanum tuberosum HOM05D008877 ORTHO05D006370 5.5e-06 56.6 107 27.1
MELO3C031327.2 Cucumis melo HOM05D007588 ORTHO05D001339 7.2e-06 56.2 105 31.4
SEGI_14255 Sequoiadendron giganteum HOM05D002752 ORTHO05D000007 7.2e-06 56.2 70 31.4
TPR.G27280 Trifolium pratense HOM05D001538 ORTHO05D000007 7.2e-06 56.2 160 28.1
FvH4_1g28741 Fragaria vesca HOM05D000003 ORTHO05D000007 9.4e-06 55.8 118 23.7
SEGI_07681 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 9.4e-06 55.8 65 36.9
SEGI_10603 Sequoiadendron giganteum HOM05D002752 ORTHO05D000007 9.4e-06 55.8 105 32.4
SEGI_31600 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 9.4e-06 55.8 122 28.7


User provided reference genes

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