Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen12g011330 Solanum pennellii HOM05D005766 ORTHO05D007002 7.7e-109 397.1 197 100.0
Solyc12g021310.3 Solanum lycopersicum HOM05D005766 ORTHO05D007002 4.0e-105 384.8 197 97.0
PGSC0003DMG400006615 Solanum tuberosum HOM05D005766 ORTHO05D007002 1.8e-102 375.9 197 93.9
Nitab4.5_0001504g0110 Nicotiana tabacum HOM05D005766 ORTHO05D007002 1.9e-83 312.8 187 81.3
Lj1A1010T47 Lonicera japonica HOM05D005766 ORTHO05D007002 5.6e-67 258.1 173 69.4
TAR629G2087 Trochodendron aralioides HOM05D005766 ORTHO05D007002 9.6e-67 257.3 176 69.3
Cc02_g02130 Coffea canephora HOM05D005766 ORTHO05D007002 3.6e-66 255.4 168 71.4
vmacro06594 Vaccinium macrocarpon HOM05D005766 ORTHO05D007002 6.2e-66 254.6 197 64.0
Rhsim03G0196600 Rhododendron simsii HOM05D005766 ORTHO05D007002 1.8e-65 253.1 174 69.0
QL11p056568 Quercus lobata HOM05D005766 ORTHO05D007002 9.0e-65 250.8 191 63.4
Hma1.2p1_0327F.1_g126600 Hydrangea macrophylla HOM05D005766 ORTHO05D007002 1.2e-64 250.4 173 67.1
Atru.chr1.316 Acer truncatum HOM05D005766 ORTHO05D007002 5.8e-64 248.1 174 66.7
Lsat_1_v5_gn_2_61121 Lactuca sativa HOM05D005766 ORTHO05D007002 1.3e-63 246.9 168 67.9
CSS0041625 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 6.4e-63 244.6 173 65.9
Cfa016332 Carpinus fangiana HOM05D005766 ORTHO05D007002 1.1e-62 243.8 173 65.9
Nn1g01746 Nelumbo nucifera HOM05D005766 ORTHO05D007002 1.4e-62 243.4 174 64.9
Prupe.2G304700 Prunus persica HOM05D005766 ORTHO05D007002 1.2e-61 240.4 173 64.2
RcHm_v2.0_Chr1g0379651 Rosa chinensis HOM05D005766 ORTHO05D007002 2.1e-61 239.6 179 60.9
Hund04814 Selenicereus undatus HOM05D005766 ORTHO05D007002 2.1e-61 239.6 174 63.2
CSS0024367 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 3.5e-61 238.8 169 65.7
Ah.07g206240 Amaranthus hybridus HOM05D005766 ORTHO05D007002 1.0e-60 237.3 186 59.7
CANSAT21G0601 Cannabis sativa HOM05D005766 ORTHO05D007002 1.0e-60 237.3 173 63.0
TWI39G0494 Tripterygium wilfordii HOM05D005766 ORTHO05D007002 2.3e-60 236.1 173 63.6
HanXRQChr14g0440221 Helianthus annuus HOM05D005766 ORTHO05D007002 3.0e-60 235.7 173 64.2
Migut.F00259 Erythranthe guttata HOM05D005766 ORTHO05D007002 5.1e-60 235.0 170 61.8
PSO170G0163 Papaver somniferum HOM05D005766 ORTHO05D007002 6.6e-60 234.6 173 62.4
Haze_00083 Corylus avellana HOM05D005766 ORTHO05D007002 8.7e-60 234.2 163 68.1
PGR004G1861 Punica granatum HOM05D005766 ORTHO05D007002 8.7e-60 234.2 174 63.8
Manes.14G020100 Manihot esculenta HOM05D005766 ORTHO05D007002 1.5e-59 233.4 173 64.7
SalBow4G0986 Salvia bowleyana HOM05D005766 ORTHO05D007002 1.9e-59 233.0 168 64.3
Ciclev10004767m.g Citrus clementina HOM05D005766 ORTHO05D007002 4.3e-59 231.9 190 59.5
CsaV3_3G021770 Cucumis sativus L. HOM05D005766 ORTHO05D007002 4.3e-59 231.9 173 60.7
Psat6g194960 Pisum sativum HOM05D000038 ORTHO05D007763 4.3e-59 231.9 204 55.4
TPR.G7746 Trifolium pratense HOM05D005766 ORTHO05D007002 1.3e-58 230.3 179 59.8
FvH4_7g30700 Fragaria vesca HOM05D005766 ORTHO05D007002 1.6e-58 229.9 173 60.1
Sc13g0009390 Simmondsia chinensis HOM05D005766 ORTHO05D007002 1.6e-58 229.9 173 63.0
MD07G1282600 Malus domestica HOM05D005766 ORTHO05D007002 2.1e-58 229.6 169 62.1
GSVIVG01028775001 Vitis vinifera HOM05D005766 ORTHO05D007002 2.8e-58 229.2 164 66.5
Thecc.03G188900 Theobroma cacao HOM05D005766 ORTHO05D007002 6.2e-58 228.0 173 63.0
Sed0015140 Sechium edule HOM05D005766 ORTHO05D007002 8.1e-58 227.6 173 60.7
Duzib205G0439 Durio zibethinus HOM05D005766 ORTHO05D007002 1.4e-57 226.9 173 61.8
MD01G1212200 Malus domestica HOM05D005766 ORTHO05D007002 1.4e-57 226.9 167 61.7
arahy.Tifrunner.gnm1.ann1.8957SA Arachis hypogaea HOM05D005766 ORTHO05D007002 3.1e-57 225.7 173 59.5
Sabra15G0019200 Salix brachista HOM05D005766 ORTHO05D007002 4.0e-57 225.3 174 62.1
Sabra15G0021700 Salix brachista HOM05D005766 ORTHO05D007002 4.0e-57 225.3 174 62.1
MELO3C006963.2 Cucumis melo HOM05D005766 ORTHO05D007002 6.9e-57 224.6 173 59.5
CAN.G71.5 Capsicum annuum HOM05D005766 ORTHO05D007002 1.2e-56 223.8 129 83.7
Aqoxy5G04049 Aquilegia oxysepala HOM05D005766 ORTHO05D007002 1.5e-56 223.4 173 61.3
Potri.015G026100 Populus trichocarpa HOM05D005766 ORTHO05D007002 2.6e-56 222.6 173 60.7
Gohir.D12G254700 Gossypium hirsutum HOM05D005766 ORTHO05D007002 3.4e-56 222.2 173 61.3
Gohir.A12G254600 Gossypium hirsutum HOM05D005766 ORTHO05D007002 4.5e-56 221.9 173 61.3
ClCG05G008560 Citrullus lanatus HOM05D005766 ORTHO05D007002 5.8e-56 221.5 177 57.1
Lj5g0016487 Lotus japonicus HOM05D005766 ORTHO05D007002 1.3e-55 220.3 170 60.0
Gorai.008G272400 Gossypium raimondii HOM05D005766 ORTHO05D007002 1.7e-55 219.9 173 60.7
Lalb_Chr06g0161401 Lupinus albus HOM05D005766 ORTHO05D007002 2.9e-55 219.2 181 56.4
unitig_37.g11976 Utricularia gibba HOM05D005766 ORTHO05D007002 2.9e-55 219.2 178 59.0
arahy.Tifrunner.gnm1.ann1.M1FPNI Arachis hypogaea HOM05D005766 ORTHO05D007002 6.4e-55 218.0 174 58.0
ATR1131G022 Amborella trichopoda HOM05D005766 ORTHO05D007002 8.4e-55 217.6 169 60.9
Cpa.g.sc3.14 Carica papaya HOM05D005766 ORTHO05D007002 1.4e-54 216.9 165 60.0
FAN10G0167 Fragaria x ananassa HOM05D005766 ORTHO05D007002 3.2e-54 215.7 159 62.3
FAN10G3945 Fragaria x ananassa HOM05D005766 ORTHO05D007002 3.2e-54 215.7 159 62.3
FAN01G0765 Fragaria x ananassa HOM05D005766 ORTHO05D007002 4.2e-54 215.3 159 61.6
FAN03G2278 Fragaria x ananassa HOM05D005766 ORTHO05D007002 4.2e-54 215.3 159 61.6
FAN06G1885 Fragaria x ananassa HOM05D005766 ORTHO05D007002 4.2e-54 215.3 159 61.6
SGA_v2.0_scaffold192G40599 Striga asiatica HOM05D005766 ORTHO05D007002 4.2e-54 215.3 168 58.9
Glyma.20G164300 Glycine max HOM05D005766 ORTHO05D007002 5.4e-54 214.9 173 56.6
SEGI_39054 Sequoiadendron giganteum HOM05D005766 ORTHO05D007002 5.4e-54 214.9 169 57.4
FAN06G2288 Fragaria x ananassa HOM05D005766 ORTHO05D007002 1.2e-53 213.8 159 61.6
Eucgr.K00307 Eucalyptus grandis HOM05D005766 ORTHO05D007002 1.6e-53 213.4 171 55.0
Phvul.007G077400 Phaseolus vulgaris HOM05D005766 ORTHO05D007002 2.1e-53 213.0 173 56.6
Glyma.10G228700 Glycine max HOM05D005766 ORTHO05D007002 1.0e-52 210.7 172 55.8
Medtr1g099390 Medicago truncatula HOM05D005766 ORTHO05D007002 1.9e-51 206.5 180 55.0
Zm00001eb221900 Zea mays HOM05D005766 ORTHO05D007002 3.3e-51 205.7 171 57.9
Ca_10701_v3 Cicer arietinum L. HOM05D005766 ORTHO05D007002 3.7e-50 202.2 174 56.9
DCAR_008901 Daucus carota HOM05D000149 ORTHO05D000076 1.8e-44 183.3 147 59.2
MBI07_g26934_MAGBIO Magnolia biondii HOM05D005766 ORTHO05D007002 5.1e-44 181.8 157 59.2
Mapoly0113s0021 Marchantia polymorpha HOM05D005766 ORTHO05D007002 3.7e-42 175.6 181 47.0
Glyma.18G131400 Glycine max HOM05D005766 ORTHO05D007002 1.8e-41 173.3 177 48.6
QL09p011987 Quercus lobata HOM05D005766 ORTHO05D007002 1.8e-41 173.3 173 50.3
AUR62021076 Chenopodium quinoa HOM05D005766 ORTHO05D007002 1.3e-39 167.2 132 60.6
AUR62031455 Chenopodium quinoa HOM05D000038 ORTHO05D007763 1.3e-39 167.2 132 60.6
Os05g0299300 Oryza sativa ssp. japonica HOM05D005766 ORTHO05D007002 7.9e-37 157.9 130 56.2
SMO203G0206 Selaginella moellendorffii HOM05D005766 ORTHO05D007002 9.7e-35 151.0 158 43.0
arahy.Tifrunner.gnm1.ann1.DV56VC Arachis hypogaea HOM05D005766 ORTHO05D007002 1.4e-30 137.1 136 47.1
Actinidia08606 Actinidia chinensis HOM05D005766 ORTHO05D007002 1.2e-29 134.0 89 61.8
Duzib084G0599 Durio zibethinus HOM05D005766 ORTHO05D007002 3.6e-29 132.5 114 60.5
Cre01.g002700 Chlamydomonas reinhardtii HOM05D005766 ORTHO05D007002 2.4e-25 119.8 168 35.7
AagrBONN_evm.TU.Sc2ySwM_344.4899 Anthoceros agrestis HOM05D005766 ORTHO05D007002 7.9e-21 104.8 173 34.7
ECA238G0894 Erigeron canadensis HOM05D005766 ORTHO05D000105 1.4e-20 104.0 81 53.1
arahy.Tifrunner.gnm1.ann1.XWQU4Z Arachis hypogaea HOM05D005766 ORTHO05D007002 1.7e-18 97.1 67 62.7
Dinv28359 Davidia involucrata HOM05D005766 ORTHO05D007002 2.9e-15 86.3 56 60.7
CiPaw.05G259700 Carya illinoinensis HOM05D005766 ORTHO05D007002 5.0e-15 85.5 60 55.0
TPR.G27363 Trifolium pratense HOM05D005766 ORTHO05D007002 1.9e-14 83.6 58 58.6
arahy.Tifrunner.gnm1.ann1.118EZC Arachis hypogaea HOM05D005766 ORTHO05D007002 7.2e-14 81.6 56 66.1
Oeu049881.1 Olea europaea HOM05D005766 ORTHO05D007002 7.0e-09 65.1 57 56.1
PRCOL_00006853 Prasinoderma coloniale HOM05D005766 ORTHO05D007002 3.5e-08 62.8 164 26.2
Glyma.08G028700 Glycine max HOM05D005766 ORTHO05D007002 1.3e-07 60.8 41 68.3
arahy.Tifrunner.gnm1.ann1.AW6XP7 Arachis hypogaea HOM05D005766 ORTHO05D007002 2.9e-07 59.7 51 39.2
Oeu044897.1 Olea europaea HOM05D005766 ORTHO05D007002 5.0e-07 58.9 87 37.9
Oeu016993.1 Olea europaea HOM05D005766 ORTHO05D007002 6.5e-07 58.5 87 37.9
Oeu023563.1 Olea europaea HOM05D005766 ORTHO05D007002 1.1e-06 57.8 87 37.9


User provided reference genes

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