Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen12g010610 Solanum pennellii HOM05D002833 ORTHO05D019253 1.1e-104 383.3 187 100.0
Sopen01g011230 Solanum pennellii HOM05D000047 ORTHO05D003210 2.8e-23 112.8 241 35.7
Sopen00g009240 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-22 110.5 70 71.4
Sopen10g028380 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-22 110.5 70 71.4
Sopen09g026230 Solanum pennellii HOM05D002833 ORTHO05D019253 1.5e-21 107.1 96 58.3
Sopen05g010840 Solanum pennellii HOM05D000002 ORTHO05D000001 2.0e-21 106.7 67 70.1
TPR.G22413 Trifolium pratense HOM05D000002 ORTHO05D000001 2.9e-20 102.8 70 65.7
Ah.03g139420 Amaranthus hybridus HOM05D000002 ORTHO05D000001 4.1e-19 99.0 70 60.0
TPR.G18525 Trifolium pratense HOM05D002833 ORTHO05D003210 3.6e-15 85.9 92 48.9
TPR.G15133 Trifolium pratense HOM05D000002 ORTHO05D000001 1.4e-14 84.0 51 72.5
CANSAT78G2186 Cannabis sativa HOM05D002833 ORTHO05D003210 1.8e-14 83.6 68 61.8
ECA233G0728 Erigeron canadensis HOM05D002833 ORTHO05D003210 1.5e-13 80.5 70 54.3
ECA246G0311 Erigeron canadensis HOM05D002833 ORTHO05D003210 1.7e-12 77.0 70 51.4
Medtr8g074100 Medicago truncatula HOM05D002833 ORTHO05D003210 4.9e-12 75.5 51 66.7
Medtr1g050388 Medicago truncatula HOM05D054285 ORTHO05D003210 6.4e-12 75.1 48 68.8
Medtr5g044790 Medicago truncatula HOM05D002833 ORTHO05D003210 1.1e-11 74.3 96 43.8
Sopen09g026360 Solanum pennellii HOM05D002833 ORTHO05D019253 3.2e-11 72.8 45 73.3
HanXRQChr02g0054271 Helianthus annuus HOM05D002833 ORTHO05D003210 4.1e-11 72.4 62 53.2
TPR.G13748 Trifolium pratense HOM05D000002 ORTHO05D000001 4.1e-11 72.4 50 60.0
Medtr8g442260 Medicago truncatula HOM05D002833 ORTHO05D003210 2.1e-10 70.1 66 48.5
HanXRQChr03g0061761 Helianthus annuus HOM05D002833 ORTHO05D003210 6.0e-10 68.6 46 58.7
HanXRQChr07g0189441 Helianthus annuus HOM05D002833 ORTHO05D003210 7.8e-10 68.2 50 54.0
Sopen04g023680 Solanum pennellii HOM05D000002 ORTHO05D019253 7.8e-10 68.2 45 68.9
VMungo0331G0694 Vigna mungo HOM05D001474 ORTHO05D001461 6.6e-09 65.1 50 56.0
Solyc11g016945.1 Solanum lycopersicum HOM05D002833 ORTHO05D003210 8.6e-09 64.7 54 48.1
Sopen01g021080 Solanum pennellii HOM05D000002 ORTHO05D000001 8.6e-09 64.7 54 48.1
Sopen01g035850 Solanum pennellii HOM05D000002 ORTHO05D000001 8.6e-09 64.7 54 48.1
Sopen02g003650 Solanum pennellii HOM05D002833 ORTHO05D003210 8.6e-09 64.7 54 48.1
Sopen02g020210 Solanum pennellii HOM05D000002 ORTHO05D000001 8.6e-09 64.7 54 48.1
Sopen03g035230 Solanum pennellii HOM05D000002 ORTHO05D000001 8.6e-09 64.7 54 48.1
Sopen04g026030 Solanum pennellii HOM05D000013 ORTHO05D000011 8.6e-09 64.7 54 48.1
Sopen06g001090 Solanum pennellii HOM05D000002 ORTHO05D000001 8.6e-09 64.7 54 48.1
Sopen06g016120 Solanum pennellii HOM05D000002 ORTHO05D000001 8.6e-09 64.7 54 48.1
Sopen06g023450 Solanum pennellii HOM05D000002 ORTHO05D000001 8.6e-09 64.7 54 48.1
Sopen08g029170 Solanum pennellii HOM05D000002 ORTHO05D000001 8.6e-09 64.7 54 48.1
Sopen09g028170 Solanum pennellii HOM05D000002 ORTHO05D000001 8.6e-09 64.7 54 48.1
Sopen12g019720 Solanum pennellii HOM05D000002 ORTHO05D000001 8.6e-09 64.7 54 48.1
AUR62009244 Chenopodium quinoa HOM05D002833 ORTHO05D003210 1.5e-08 63.9 71 40.8
AUR62019526 Chenopodium quinoa HOM05D002833 ORTHO05D003210 1.5e-08 63.9 66 40.9
ECA233G4286 Erigeron canadensis HOM05D000002 ORTHO05D003210 1.9e-08 63.5 67 41.8
Glyma.09G146600 Glycine max HOM05D027225 ORTHO05D003210 3.3e-08 62.8 39 76.9
ECA233G3435 Erigeron canadensis HOM05D002833 ORTHO05D003210 7.3e-08 61.6 50 44.0
ECA238G2166 Erigeron canadensis HOM05D002833 ORTHO05D003210 7.3e-08 61.6 48 47.9
ECA248G3833 Erigeron canadensis HOM05D002833 ORTHO05D003210 7.3e-08 61.6 52 46.2
AUR62034085 Chenopodium quinoa HOM05D000003 ORTHO05D000006 9.6e-08 61.2 52 48.1
AUR62020375 Chenopodium quinoa HOM05D002833 ORTHO05D003210 1.2e-07 60.8 66 40.9
AUR62039401 Chenopodium quinoa HOM05D002833 ORTHO05D003210 1.6e-07 60.5 62 40.3
HanXRQChr17g0542971 Helianthus annuus HOM05D002833 ORTHO05D003210 1.6e-07 60.5 51 43.1
AUR62023882 Chenopodium quinoa HOM05D002833 ORTHO05D003210 2.1e-07 60.1 55 47.3
AUR62026603 Chenopodium quinoa HOM05D002833 ORTHO05D003210 2.1e-07 60.1 77 40.3
ECA246G3983 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.8e-07 59.7 48 45.8
ECA236G5050 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.7e-07 58.9 52 42.3
Ah.05g172100 Amaranthus hybridus HOM05D002833 ORTHO05D003210 8.1e-07 58.2 55 47.3
Sopen11g009220 Solanum pennellii HOM05D002833 ORTHO05D003210 8.1e-07 58.2 32 81.2
AUR62014119 Chenopodium quinoa HOM05D002833 ORTHO05D003210 1.1e-06 57.8 62 40.3
ECA236G1804 Erigeron canadensis HOM05D000031 ORTHO05D000001 1.1e-06 57.8 48 45.8
ECA233G2682 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.4e-06 57.4 47 44.7
ECA247G1426 Erigeron canadensis HOM05D002833 ORTHO05D003210 1.4e-06 57.4 47 44.7
Sopen11g011440 Solanum pennellii HOM05D000004 ORTHO05D000001 1.4e-06 57.4 32 81.2
HanXRQChr09g0277371 Helianthus annuus HOM05D002833 ORTHO05D003210 1.8e-06 57.0 48 50.0
ECA236G0516 Erigeron canadensis HOM05D002833 ORTHO05D003210 2.4e-06 56.6 49 42.9
HanXRQChr08g0213721 Helianthus annuus HOM05D000061 ORTHO05D003210 3.1e-06 56.2 67 34.3
HanXRQChr17g0552671 Helianthus annuus HOM05D002833 ORTHO05D003210 4.0e-06 55.8 65 35.4
Ah.08g221250 Amaranthus hybridus HOM05D002833 ORTHO05D003210 5.2e-06 55.5 63 44.4
Ah.03g148000 Amaranthus hybridus HOM05D002833 ORTHO05D003210 6.8e-06 55.1 65 41.5
AUR62001181 Chenopodium quinoa HOM05D002833 ORTHO05D003210 6.8e-06 55.1 45 51.1


User provided reference genes

Program Settings