Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen12g010550 Solanum pennellii HOM05D008571 ORTHO05D011280 1.1e-209 733.0 379 100.0
Sopen05g024280 Solanum pennellii HOM05D008571 ORTHO05D011280 8.5e-88 328.2 242 72.7
PGSC0003DMG400024370 Solanum tuberosum HOM05D008571 ORTHO05D011280 1.4e-87 327.4 262 68.3
Sopen08g023430 Solanum pennellii HOM05D008571 ORTHO05D011280 1.1e-74 284.6 229 70.3
PGSC0003DMG400040582 Solanum tuberosum HOM05D008571 ORTHO05D011280 5.9e-73 278.9 240 63.8
Sopen02g010540 Solanum pennellii HOM05D008571 ORTHO05D011280 1.4e-53 214.5 155 72.3
Sopen10g024020 Solanum pennellii HOM05D008571 ORTHO05D011280 1.4e-50 204.5 159 71.1
PGSC0003DMG400021964 Solanum tuberosum HOM05D008571 ORTHO05D011280 2.4e-50 203.8 160 69.4
Sopen09g011970 Solanum pennellii HOM05D008571 ORTHO05D011280 4.1e-50 203.0 345 40.0
Sopen05g008270 Solanum pennellii HOM05D000006 ORTHO05D000695 3.0e-48 196.8 199 61.3
Cc04_g10140 Coffea canephora HOM05D000002 ORTHO05D004433 1.1e-45 188.3 236 46.2
Sopen10g024150 Solanum pennellii HOM05D008571 ORTHO05D011280 2.3e-45 187.2 146 71.2
FvH4_5g31431 Fragaria vesca HOM05D000002 ORTHO05D004433 8.9e-45 185.3 247 44.1
RcHm_v2.0_Chr3g0481931 Rosa chinensis HOM05D000002 ORTHO05D000001 2.0e-44 184.1 246 43.5
Sopen11g011280 Solanum pennellii HOM05D008571 ORTHO05D011280 2.0e-44 184.1 146 67.8
Sopen10g024090 Solanum pennellii HOM05D008571 ORTHO05D011280 3.4e-44 183.3 146 70.5
Sopen01g024850 Solanum pennellii HOM05D008571 ORTHO05D011280 1.4e-42 177.9 179 55.9
Sopen02g010940 Solanum pennellii HOM05D008571 ORTHO05D011280 8.6e-40 168.7 121 72.7
TAR009G0003 Trochodendron aralioides HOM05D008571 ORTHO05D004433 8.6e-40 168.7 257 41.2
PGSC0003DMG400038206 Solanum tuberosum HOM05D008571 ORTHO05D011280 1.1e-34 151.8 275 40.4
SHI45609 Sapria himalayana HOM05D000002 ORTHO05D000001 3.2e-34 150.2 257 40.1
Sopen03g016140 Solanum pennellii HOM05D008571 ORTHO05D011280 3.2e-34 150.2 138 60.1
SHI49936 Sapria himalayana HOM05D000002 ORTHO05D000001 7.1e-34 149.1 255 39.6
SHI06746 Sapria himalayana HOM05D000002 ORTHO05D004433 1.6e-33 147.9 225 40.0
ECA238G3349 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.7e-33 147.1 224 40.2
Sopen02g016810 Solanum pennellii HOM05D008571 ORTHO05D004433 2.7e-33 147.1 120 65.8
ECA248G0669 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.0e-33 146.0 227 41.0
BolC8t49584H Brassica oleracea HOM05D000002 ORTHO05D004433 1.0e-32 145.2 223 41.7
Nn1g02545 Nelumbo nucifera HOM05D000002 ORTHO05D004433 1.3e-32 144.8 204 42.2
SHI14609 Sapria himalayana HOM05D000002 ORTHO05D000001 5.1e-32 142.9 225 38.7
SHI47859 Sapria himalayana HOM05D000002 ORTHO05D004433 6.6e-32 142.5 232 41.4
SHI18328 Sapria himalayana HOM05D000002 ORTHO05D000001 8.6e-32 142.1 257 39.7
PGSC0003DMG400040136 Solanum tuberosum HOM05D008571 ORTHO05D011280 1.5e-31 141.4 130 60.8
ECA233G1874 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-31 141.0 232 37.9
Nn4g23986 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.9e-31 141.0 190 44.2
SHI16256 Sapria himalayana HOM05D000002 ORTHO05D004433 4.3e-31 139.8 224 42.0
ECA236G5067 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.3e-31 139.0 236 37.7
SHI03937 Sapria himalayana HOM05D000002 ORTHO05D004433 9.5e-31 138.7 227 41.4
ECA234G1536 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.6e-30 137.9 232 38.4
ECA240G0479 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.7e-30 136.3 261 37.5
SHI07649 Sapria himalayana HOM05D000002 ORTHO05D004433 4.7e-30 136.3 227 41.4
SHI38827 Sapria himalayana HOM05D000002 ORTHO05D004433 4.7e-30 136.3 220 40.9
PGSC0003DMG400046033 Solanum tuberosum HOM05D008571 ORTHO05D011280 4.7e-30 136.3 146 53.4
ECA238G4301 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.1e-30 135.6 216 38.4
PGSC0003DMG400017449 Solanum tuberosum HOM05D008571 ORTHO05D011280 1.8e-29 134.4 127 65.4
PGSC0003DMG400017450 Solanum tuberosum HOM05D008571 ORTHO05D011280 1.8e-29 134.4 127 65.4
MD01G1096700 Malus domestica HOM05D000002 ORTHO05D000001 5.2e-29 132.9 231 38.1
Sopen05g011290 Solanum pennellii HOM05D008571 ORTHO05D011280 6.8e-29 132.5 123 62.6
ECA247G3536 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.5e-28 131.3 238 38.2
Oeu006707.1 Olea europaea HOM05D000002 ORTHO05D004433 3.4e-28 130.2 170 44.1
Oeu026048.1 Olea europaea HOM05D000002 ORTHO05D000001 5.8e-28 129.4 233 37.8
Ah.13g077590 Amaranthus hybridus HOM05D000002 ORTHO05D000001 1.7e-27 127.9 240 35.4
ECA246G3093 Erigeron canadensis HOM05D001467 ORTHO05D001214 2.9e-27 127.1 261 36.4
Sopen08g023440 Solanum pennellii HOM05D003027 ORTHO05D011280 4.9e-27 126.3 96 76.0
SHI04168 Sapria himalayana HOM05D000002 ORTHO05D004433 1.4e-26 124.8 158 44.9
ECA248G3794 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.4e-26 122.9 184 41.3
SHI27796 Sapria himalayana HOM05D000002 ORTHO05D000001 7.1e-26 122.5 211 40.3
Sopen07g005460 Solanum pennellii HOM05D008571 ORTHO05D011280 1.2e-25 121.7 118 55.9
Sopen05g027370 Solanum pennellii HOM05D000002 ORTHO05D004433 2.7e-25 120.6 213 37.6
Sopen03g027090 Solanum pennellii HOM05D000002 ORTHO05D002065 7.8e-25 119.0 96 65.6
SHI18424 Sapria himalayana HOM05D000002 ORTHO05D004433 1.3e-24 118.2 211 39.8
PGSC0003DMG400044216 Solanum tuberosum HOM05D008571 ORTHO05D011280 1.7e-24 117.9 90 66.7
Sopen00g013760 Solanum pennellii HOM05D008571 ORTHO05D011280 3.0e-24 117.1 120 52.5
Sopen06g004470 Solanum pennellii HOM05D008571 ORTHO05D011280 3.0e-24 117.1 115 53.0
Sopen07g005410 Solanum pennellii HOM05D008571 ORTHO05D011280 3.9e-24 116.7 120 52.5
TAR610G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 3.9e-24 116.7 207 38.6
SHI32918 Sapria himalayana HOM05D000002 ORTHO05D000001 6.6e-24 115.9 203 40.4
PGSC0003DMG400023224 Solanum tuberosum HOM05D008571 ORTHO05D011280 6.6e-24 115.9 120 52.5
ECA248G0687 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.7e-24 115.5 235 34.5
ECA234G3440 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-23 115.2 146 43.2
SHI02070 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-23 115.2 211 39.8
Sopen07g005370 Solanum pennellii HOM05D008571 ORTHO05D000001 1.1e-23 115.2 112 53.6
ECA240G4274 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.5e-23 114.0 219 36.5
SHI18394 Sapria himalayana HOM05D000002 ORTHO05D004433 3.3e-23 113.6 180 41.1
Nn1g01470 Nelumbo nucifera HOM05D000002 ORTHO05D004433 4.3e-23 113.2 222 35.1
Nn1g09492 Nelumbo nucifera HOM05D000002 ORTHO05D004433 4.3e-23 113.2 189 38.1
Nn8g39416 Nelumbo nucifera HOM05D000002 ORTHO05D000001 7.3e-23 112.5 190 37.9
Sopen12g020480 Solanum pennellii HOM05D000002 ORTHO05D000001 7.3e-23 112.5 133 51.9
PSO675G3339 Papaver somniferum HOM05D000002 ORTHO05D004433 9.6e-23 112.1 128 46.1
SHI10030 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-22 111.7 211 38.9
SHI18909 Sapria himalayana HOM05D000002 ORTHO05D004433 1.2e-22 111.7 129 46.5
SHI44323 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-22 111.7 158 42.4
SHI39436 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-22 111.3 170 40.0
SHI39438 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-22 111.3 170 40.0
PGSC0003DMG400005599 Solanum tuberosum HOM05D008571 ORTHO05D000574 1.6e-22 111.3 82 67.1
ECA233G2777 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.1e-22 110.9 148 44.6
ECA233G2071 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.6e-22 110.2 225 36.4
ECA233G2147 Erigeron canadensis HOM05D000509 ORTHO05D004433 1.1e-21 108.6 174 39.1
ECA246G5102 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-21 108.6 131 42.0
CSS0021348 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 1.4e-21 108.2 201 37.3
Ah.13g069620 Amaranthus hybridus HOM05D000002 ORTHO05D004433 1.8e-21 107.8 252 32.1
SHI51732 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-21 107.8 233 34.8
Ah.01g008310 Amaranthus hybridus HOM05D000002 ORTHO05D004433 3.1e-21 107.1 207 34.8
PGSC0003DMG401023109 Solanum tuberosum HOM05D008571 ORTHO05D011280 4.0e-21 106.7 116 51.7
SHI10488 Sapria himalayana HOM05D000002 ORTHO05D000001 6.9e-21 105.9 198 39.9
Sopen12g018110 Solanum pennellii HOM05D000004 ORTHO05D000002 6.9e-21 105.9 175 34.9
Thhalv10019725m.g Eutrema salsugineum HOM05D000002 ORTHO05D004433 2.0e-20 104.4 144 39.6
Nn1g07613 Nelumbo nucifera HOM05D000002 ORTHO05D000001 2.0e-20 104.4 199 36.2
Thhalv10000559m.g Eutrema salsugineum HOM05D008571 ORTHO05D004433 2.6e-20 104.0 82 57.3
PGSC0003DMG400004307 Solanum tuberosum HOM05D008571 ORTHO05D011280 2.6e-20 104.0 120 44.2
PGSC0003DMG400001585 Solanum tuberosum HOM05D000002 ORTHO05D004433 9.9e-20 102.1 168 35.7
Nn8g40101 Nelumbo nucifera HOM05D000002 ORTHO05D004433 1.3e-19 101.7 215 33.5
SHI43075 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-19 101.3 182 35.7
Sopen04g014150 Solanum pennellii HOM05D008571 ORTHO05D011280 1.7e-19 101.3 120 49.2
Ah.16g108610 Amaranthus hybridus HOM05D000002 ORTHO05D004433 2.9e-19 100.5 126 42.1
SHI12756 Sapria himalayana HOM05D000002 ORTHO05D004433 4.9e-19 99.8 100 51.0
ECA234G3041 Erigeron canadensis HOM05D001549 ORTHO05D003098 1.9e-18 97.8 237 32.9
SHI04823 Sapria himalayana HOM05D000002 ORTHO05D004433 3.2e-18 97.1 255 33.7
SHI21269 Sapria himalayana HOM05D000002 ORTHO05D004433 3.2e-18 97.1 240 33.3
Oeu003015.1 Olea europaea HOM05D000002 ORTHO05D004433 5.4e-18 96.3 125 40.0
SHI03641 Sapria himalayana HOM05D000002 ORTHO05D004433 5.4e-18 96.3 160 38.8
SHI45690 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-17 94.7 202 36.6
Sopen00g014100 Solanum pennellii HOM05D008571 ORTHO05D011280 7.8e-17 92.4 111 52.3
Nn3g20325 Nelumbo nucifera HOM05D008571 ORTHO05D004433 1.3e-16 91.7 145 39.3
ECA246G0537 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.7e-16 91.3 244 30.3
Sopen04g021490 Solanum pennellii HOM05D008571 ORTHO05D011280 1.7e-16 91.3 104 50.0
Oeu034487.1 Olea europaea HOM05D000002 ORTHO05D004433 2.3e-16 90.9 105 41.0
ECA240G3347 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.0e-16 90.5 203 33.5
SHI47495 Sapria himalayana HOM05D000002 ORTHO05D000001 3.9e-16 90.1 196 36.7
PGSC0003DMG400040487 Solanum tuberosum HOM05D008571 ORTHO05D395235 1.1e-15 88.6 140 38.6
PGSC0003DMG400041297 Solanum tuberosum HOM05D008571 ORTHO05D011280 1.1e-15 88.6 94 52.1
Cc05_g05430 Coffea canephora HOM05D000002 ORTHO05D004433 7.3e-15 85.9 83 53.0
CAN.G1829.1 Capsicum annuum HOM05D000583 ORTHO05D004433 9.6e-15 85.5 150 38.7
Sopen03g008290 Solanum pennellii HOM05D000002 ORTHO05D004433 9.6e-15 85.5 78 59.0
CSS0036927 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 1.3e-14 85.1 166 38.6
SHI05549 Sapria himalayana HOM05D000002 ORTHO05D004433 2.8e-14 84.0 102 45.1
Sopen11g011140 Solanum pennellii HOM05D008200 ORTHO05D010849 4.8e-14 83.2 66 63.6
SHI43061 Sapria himalayana HOM05D000002 ORTHO05D004433 6.2e-14 82.8 126 40.5
Nn2g15808 Nelumbo nucifera HOM05D000006 ORTHO05D004433 8.1e-14 82.4 82 53.7
ECA233G2319 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.1e-13 80.5 80 51.2
SHI00405 Sapria himalayana HOM05D000002 ORTHO05D000001 4.0e-13 80.1 166 32.5
ECA247G2369 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.3e-13 79.7 212 29.2
PGSC0003DMG400045298 Solanum tuberosum HOM05D008571 ORTHO05D011280 1.5e-12 78.2 90 45.6
ECA246G2496 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.5e-12 76.6 221 29.4
ECA232G4651 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.7e-11 74.7 147 36.7
Nitab4.5_0003901g0050 Nicotiana tabacum HOM05D000802 ORTHO05D001074 1.7e-11 74.7 82 47.6
Oeu030662.1 Olea europaea HOM05D000002 ORTHO05D004433 3.8e-11 73.6 141 34.8
Nitab4.5_0000619g0120 Nicotiana tabacum HOM05D000802 ORTHO05D001074 6.4e-11 72.8 82 46.3
CSS0020823 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.4e-10 71.6 113 41.6
Nn5g27722 Nelumbo nucifera HOM05D000002 ORTHO05D004433 2.4e-10 70.9 81 46.9
ECA240G1708 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.2e-10 70.5 185 29.7
ECA246G4710 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.2e-10 70.1 192 31.2
Nn2g15606 Nelumbo nucifera HOM05D000006 ORTHO05D004433 7.1e-10 69.3 134 30.6
Nn5g30038 Nelumbo nucifera HOM05D000002 ORTHO05D004433 1.2e-09 68.6 68 50.0
Nn8g40511 Nelumbo nucifera HOM05D000002 ORTHO05D000001 2.1e-09 67.8 252 25.8
Sopen09g027930 Solanum pennellii HOM05D000002 ORTHO05D004433 2.1e-09 67.8 75 48.0
CAN.G587.30 Capsicum annuum HOM05D000015 ORTHO05D001173 2.7e-09 67.4 49 69.4
Peaxi162Scf00001g00511 Petunia axillaris HOM05D000802 ORTHO05D001074 3.5e-09 67.0 139 34.5
Oeu035997.1 Olea europaea HOM05D000002 ORTHO05D004433 1.3e-08 65.1 68 52.9
CSS0046925 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 3.0e-08 63.9 217 30.0
SHI37107 Sapria himalayana HOM05D000002 ORTHO05D004433 3.9e-08 63.5 63 49.2
Ah.16g106890 Amaranthus hybridus HOM05D000002 ORTHO05D004433 5.1e-08 63.2 63 54.0
Nn1g03239 Nelumbo nucifera HOM05D000002 ORTHO05D004433 5.1e-08 63.2 81 43.2
Sopen09g013990 Solanum pennellii HOM05D008648 ORTHO05D010855 3.3e-07 60.5 43 76.7
SHI09918 Sapria himalayana HOM05D000002 ORTHO05D004433 7.4e-07 59.3 174 29.3
CiPaw.08G098800 Carya illinoinensis HOM05D000002 ORTHO05D004433 1.3e-06 58.5 61 54.1
Sopen00g003280 Solanum pennellii HOM05D008571 ORTHO05D011280 1.3e-06 58.5 56 55.4
PGSC0003DMG400011395 Solanum tuberosum HOM05D000802 ORTHO05D001074 1.3e-06 58.5 139 33.1
Nn4g25779 Nelumbo nucifera HOM05D000002 ORTHO05D004433 2.8e-06 57.4 82 40.2
PGSC0003DMG400013955 Solanum tuberosum HOM05D000021 ORTHO05D000010 2.8e-06 57.4 62 48.4
Oeu012846.1 Olea europaea HOM05D003971 ORTHO05D004433 3.7e-06 57.0 85 36.5
SHI32312 Sapria himalayana HOM05D000002 ORTHO05D000001 3.7e-06 57.0 208 27.9
Sopen05g014170 Solanum pennellii HOM05D000004 ORTHO05D000002 4.8e-06 56.6 52 57.7
Sopen11g022370 Solanum pennellii HOM05D000036 ORTHO05D005472 4.8e-06 56.6 53 62.3
CAN.G339.28 Capsicum annuum HOM05D000802 ORTHO05D001074 8.1e-06 55.8 116 35.3


User provided reference genes

Program Settings