Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen12g009540 Solanum pennellii HOM05D000002 ORTHO05D000001 3.8e-157 558.1 286 100.0
Sopen07g023540 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-95 354.0 322 62.7
Sopen08g008710 Solanum pennellii HOM05D000002 ORTHO05D000001 3.8e-72 275.8 290 55.5
Sopen05g025660 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-56 224.6 299 49.8
Sopen01g020860 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-51 207.6 285 47.4
Sopen05g011590 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-39 166.4 285 41.1
Sopen01g011050 Solanum pennellii HOM05D000002 ORTHO05D000001 5.5e-39 165.6 198 51.0
Sopen09g009110 Solanum pennellii HOM05D000002 ORTHO05D000001 2.0e-36 157.1 287 40.1
Sopen11g006140 Solanum pennellii HOM05D000002 ORTHO05D000001 2.2e-35 153.7 224 46.9
Hma1.2p1_1611F.1_g293530 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.0e-32 144.8 102 64.7
Sopen08g005760 Solanum pennellii HOM05D000002 ORTHO05D000001 7.7e-25 118.6 123 57.7
Sopen09g020660 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-24 118.2 74 79.7
Sopen01g034220 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-20 104.8 69 76.8
Hma1.2p1_0939F.1_g239370 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 7.7e-17 92.0 117 41.0
Hma1.2p1_1270F.1_g271670 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.2e-16 90.5 102 46.1
Sopen11g011310 Solanum pennellii HOM05D000002 ORTHO05D000001 2.9e-16 90.1 92 56.5
Hma1.2p1_0565F.1_g179600 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.1e-15 88.2 117 40.2
PGSC0003DMG400043581 Solanum tuberosum HOM05D008583 ORTHO05D000001 1.1e-15 88.2 234 36.8
Hma1.2p1_0473F.1_g160130 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.5e-15 85.9 117 40.2
COL.COLO4_14937 Corchorus olitorius HOM05D000002 ORTHO05D000001 1.6e-14 84.3 123 35.0
TAR386G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.1e-14 84.0 90 43.3
Hma1.2p1_1626F.1_g294340 Hydrangea macrophylla HOM05D004993 ORTHO05D000001 2.8e-14 83.6 53 66.0
Hma1.2p1_0315F.1_g122550 Hydrangea macrophylla HOM05D004993 ORTHO05D000001 4.7e-14 82.8 100 45.0
Hma1.2p1_0001F.1_g001500 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.1e-14 82.4 123 36.6
Hma1.2p1_0270F.1_g108510 Hydrangea macrophylla HOM05D004993 ORTHO05D000001 6.1e-14 82.4 95 42.1
Hma1.2p1_0862F.1_g229960 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 1.4e-13 81.3 92 44.6
COL.COLO4_20725 Corchorus olitorius HOM05D000002 ORTHO05D000001 2.3e-13 80.5 90 40.0
Oeu019477.1 Olea europaea HOM05D000002 ORTHO05D000001 2.3e-13 80.5 118 39.0
Oeu057465.1 Olea europaea HOM05D000002 ORTHO05D000001 2.3e-13 80.5 144 36.1
COL.COLO4_33694 Corchorus olitorius HOM05D000002 ORTHO05D000001 3.0e-13 80.1 107 35.5
TPR.G512 Trifolium pratense HOM05D011146 ORTHO05D012706 8.8e-13 78.6 97 43.3
Sopen01g008940 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-12 78.2 52 65.4
COL.COLO4_23623 Corchorus olitorius HOM05D000002 ORTHO05D000001 1.5e-12 77.8 95 38.9
Oeu008172.1 Olea europaea HOM05D000002 ORTHO05D000001 1.5e-12 77.8 135 35.6
Oeu022190.1 Olea europaea HOM05D000002 ORTHO05D000001 1.5e-12 77.8 132 35.6
Oeu053596.1 Olea europaea HOM05D000002 ORTHO05D000001 1.5e-12 77.8 149 35.6
Rhsim05G0026100 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.5e-12 77.8 124 35.5
TPR.G17518 Trifolium pratense HOM05D000002 ORTHO05D000001 2.0e-12 77.4 100 39.0
QL04p082088 Quercus lobata HOM05D000002 ORTHO05D000001 2.6e-12 77.0 108 35.2
Sabra01G0117000 Salix brachista HOM05D000002 ORTHO05D000001 2.6e-12 77.0 89 40.4
Rhsim02G0228300 Rhododendron simsii HOM05D000002 ORTHO05D000001 3.4e-12 76.6 128 32.8
Hma1.2p1_0022F.1_g014640 Hydrangea macrophylla HOM05D004993 ORTHO05D012706 4.4e-12 76.3 95 44.2
TPR.G24932 Trifolium pratense HOM05D000002 ORTHO05D000001 4.4e-12 76.3 100 38.0
Nn8g38577 Nelumbo nucifera HOM05D000002 ORTHO05D000001 5.7e-12 75.9 122 39.3
Oeu037102.1 Olea europaea HOM05D000002 ORTHO05D000001 9.8e-12 75.1 144 34.0
SHI11483 Sapria himalayana HOM05D014065 ORTHO05D000001 1.3e-11 74.7 123 35.8
SHI16346 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-11 74.7 123 35.0
Atru.chr10.1206 Acer truncatum HOM05D000002 ORTHO05D000001 2.2e-11 73.9 84 45.2
Oeu057479.1 Olea europaea HOM05D000002 ORTHO05D000001 2.2e-11 73.9 121 36.4
Hma1.2p1_0459F.1_g157220 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.8e-11 73.6 138 34.8
QL02p077346 Quercus lobata HOM05D000002 ORTHO05D000001 2.8e-11 73.6 116 36.2
Hma1.2p1_0000F.1_g000910 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.7e-11 73.2 150 33.3
Oeu039050.1 Olea europaea HOM05D000002 ORTHO05D000001 3.7e-11 73.2 145 33.8
Oeu011917.1 Olea europaea HOM05D000002 ORTHO05D000001 6.3e-11 72.4 144 33.3
ECA246G1142 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-10 71.6 88 39.8
Lj3g0007998 Lotus japonicus HOM05D000002 ORTHO05D000001 1.4e-10 71.2 100 37.0
COL.COLO4_06456 Corchorus olitorius HOM05D000002 ORTHO05D000001 1.8e-10 70.9 90 36.7
COL.COLO4_20536 Corchorus olitorius HOM05D000002 ORTHO05D000001 1.8e-10 70.9 123 34.1
COL.COLO4_29402 Corchorus olitorius HOM05D000002 ORTHO05D000001 1.8e-10 70.9 80 38.8
COL.COLO4_30477 Corchorus olitorius HOM05D000002 ORTHO05D000001 3.1e-10 70.1 122 34.4
ECA232G0091 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.1e-10 70.1 144 30.6
ECA247G3681 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.1e-10 70.1 145 31.7
HanXRQChr09g0254161 Helianthus annuus HOM05D000002 ORTHO05D000001 4.1e-10 69.7 89 36.0
SHI07546 Sapria himalayana HOM05D000002 ORTHO05D000001 5.4e-10 69.3 123 34.1
Sopen07g006640 Solanum pennellii HOM05D000002 ORTHO05D000001 5.4e-10 69.3 106 47.2
ECA247G0128 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.2e-10 68.6 145 31.0
Oeu012960.1 Olea europaea HOM05D000002 ORTHO05D000001 1.2e-09 68.2 131 33.6
COL.COLO4_24324 Corchorus olitorius HOM05D000002 ORTHO05D000001 1.6e-09 67.8 91 38.5
HanXRQChr17g0568341 Helianthus annuus HOM05D000002 ORTHO05D000001 1.6e-09 67.8 86 40.7
SHI14897 Sapria himalayana HOM05D000002 ORTHO05D000001 2.0e-09 67.4 92 37.0
PGSC0003DMG400002871 Solanum tuberosum HOM05D008583 ORTHO05D000001 2.0e-09 67.4 44 72.7
HanXRQChr09g0251421 Helianthus annuus HOM05D000530 ORTHO05D003341 3.5e-09 66.6 86 36.0
ECA246G2563 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.5e-09 66.2 85 36.5
HanXRQChr02g0040961 Helianthus annuus HOM05D000002 ORTHO05D000001 4.5e-09 66.2 88 35.2
HanXRQChr15g0491201 Helianthus annuus HOM05D000002 ORTHO05D000001 4.5e-09 66.2 87 34.5
Rhsim08G0105700 Rhododendron simsii HOM05D000995 ORTHO05D000001 4.5e-09 66.2 99 39.4
CAN.G349.10 Capsicum annuum HOM05D000002 ORTHO05D000001 5.9e-09 65.9 54 64.8
QL03p028934 Quercus lobata HOM05D000002 ORTHO05D000001 7.8e-09 65.5 83 37.3
HanXRQChr17g0566031 Helianthus annuus HOM05D000002 ORTHO05D000001 1.0e-08 65.1 88 36.4
Hma1.2p1_0242F.1_g100810 Hydrangea macrophylla HOM05D004993 ORTHO05D012706 1.0e-08 65.1 92 37.0
Lj2C1206G8 Lonicera japonica HOM05D014274 ORTHO05D000001 1.0e-08 65.1 133 29.3
HanXRQChr03g0070601 Helianthus annuus HOM05D000002 ORTHO05D000001 1.3e-08 64.7 89 38.2
HanXRQChr14g0457051 Helianthus annuus HOM05D000002 ORTHO05D000001 1.3e-08 64.7 88 36.4
SHI18682 Sapria himalayana HOM05D004993 ORTHO05D000001 1.3e-08 64.7 71 45.1
TAR650G0001 Trochodendron aralioides HOM05D000067 ORTHO05D000001 1.3e-08 64.7 122 30.3
Eucgr.F03845 Eucalyptus grandis HOM05D000053 ORTHO05D000035 1.7e-08 64.3 87 36.8
HanXRQChr17g0570071 Helianthus annuus HOM05D000002 ORTHO05D000001 1.7e-08 64.3 120 30.0
SHI16766 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-08 64.3 74 41.9
HanXRQChr16g0523581 Helianthus annuus HOM05D000002 ORTHO05D000001 2.3e-08 63.9 85 36.5
ECA234G3518 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.9e-08 63.5 87 37.9
Sabra13G0070400 Salix brachista HOM05D000002 ORTHO05D000001 2.9e-08 63.5 91 36.3
SHI27389 Sapria himalayana HOM05D004993 ORTHO05D000001 2.9e-08 63.5 109 38.5
Sopen04g019490 Solanum pennellii HOM05D000002 ORTHO05D000001 2.9e-08 63.5 109 43.1
Sopen04g020320 Solanum pennellii HOM05D000004 ORTHO05D000002 2.9e-08 63.5 90 48.9
FvH4_5g36481 Fragaria vesca HOM05D013433 ORTHO05D000001 5.0e-08 62.8 120 34.2
SHI38837 Sapria himalayana HOM05D004993 ORTHO05D000001 5.0e-08 62.8 67 46.3
HanXRQChr05g0138601 Helianthus annuus HOM05D000002 ORTHO05D000001 6.6e-08 62.4 119 31.1
HanXRQChr07g0187191 Helianthus annuus HOM05D000002 ORTHO05D000001 6.6e-08 62.4 119 31.1
HanXRQChr14g0429151 Helianthus annuus HOM05D000002 ORTHO05D000001 6.6e-08 62.4 132 28.8
Sopen04g020290 Solanum pennellii HOM05D000002 ORTHO05D000001 6.6e-08 62.4 90 46.7
GSVIVG01036343001 Vitis vinifera HOM05D000067 ORTHO05D000097 6.6e-08 62.4 81 38.3
Atru.chr2.1455 Acer truncatum HOM05D000002 ORTHO05D000001 8.6e-08 62.0 134 30.6
COL.COLO4_33905 Corchorus olitorius HOM05D000002 ORTHO05D000001 8.6e-08 62.0 102 33.3
ECA246G2243 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.6e-08 62.0 85 38.8
Eucgr.E01636 Eucalyptus grandis HOM05D000002 ORTHO05D000001 8.6e-08 62.0 73 46.6
GSVIVG01016108001 Vitis vinifera HOM05D000002 ORTHO05D000001 8.6e-08 62.0 130 30.0
HanXRQChr07g0202651 Helianthus annuus HOM05D000002 ORTHO05D000001 1.1e-07 61.6 88 35.2
Hma1.2p1_0020F.1_g014040 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.1e-07 61.6 92 33.7
PSO478G4367 Papaver somniferum HOM05D000002 ORTHO05D000001 1.1e-07 61.6 84 29.8
Aa31LG3G5060 Aethionema arabicum HOM05D000002 ORTHO05D000001 1.5e-07 61.2 151 27.2
ECA240G0774 Erigeron canadensis HOM05D000004 ORTHO05D000001 1.5e-07 61.2 86 36.0
Hma1.2p1_1527F.1_g289050 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.5e-07 61.2 98 36.7
SHI35638 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-07 61.2 72 41.7
Aa31LG1G6100 Aethionema arabicum HOM05D000002 ORTHO05D000001 1.9e-07 60.8 106 27.4
HanXRQChr11g0320201 Helianthus annuus HOM05D000002 ORTHO05D000001 1.9e-07 60.8 88 33.0
HanXRQChr11g0320841 Helianthus annuus HOM05D000002 ORTHO05D000001 1.9e-07 60.8 83 34.9
Sabra10G0062000 Salix brachista HOM05D000002 ORTHO05D000001 1.9e-07 60.8 86 32.6
SHI42894 Sapria himalayana HOM05D000002 ORTHO05D000001 1.9e-07 60.8 57 47.4
Hma1.2p1_0948F.1_g240460 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.3e-07 60.1 92 32.6
PSO170G3169 Papaver somniferum HOM05D000002 ORTHO05D000001 3.3e-07 60.1 134 29.9
Sopen04g020270 Solanum pennellii HOM05D000004 ORTHO05D000002 3.3e-07 60.1 90 47.8
SGA_v2.0_scaffold400G50849 Striga asiatica HOM05D000002 ORTHO05D000001 3.3e-07 60.1 89 33.7
Atru.chr2.999 Acer truncatum HOM05D000002 ORTHO05D000001 4.3e-07 59.7 90 37.8
HanXRQChr03g0064201 Helianthus annuus HOM05D000002 ORTHO05D000001 4.3e-07 59.7 88 34.1
TAR541G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 4.3e-07 59.7 131 26.7
ECA240G3677 Erigeron canadensis HOM05D000031 ORTHO05D000030 5.6e-07 59.3 88 36.4
Hma1.2p1_0133F.1_g061100 Hydrangea macrophylla HOM05D004993 ORTHO05D000001 5.6e-07 59.3 72 41.7
Nitab4.5_0002205g0040 Nicotiana tabacum HOM05D000002 ORTHO05D000001 5.6e-07 59.3 83 33.7
Rhsim05G0196600 Rhododendron simsii HOM05D000002 ORTHO05D000001 5.6e-07 59.3 151 31.1
Atru.chr2.3036 Acer truncatum HOM05D000002 ORTHO05D000001 7.3e-07 58.9 88 33.0
FvH4_5g21971 Fragaria vesca HOM05D013433 ORTHO05D029348 7.3e-07 58.9 110 33.6
Atru.chr10.264 Acer truncatum HOM05D000002 ORTHO05D000001 9.5e-07 58.5 94 28.7
FvH4_4g24051 Fragaria vesca HOM05D000002 ORTHO05D000001 9.5e-07 58.5 88 30.7
FvH4_6g38191 Fragaria vesca HOM05D021504 ORTHO05D025385 9.5e-07 58.5 88 33.0
HanXRQChr00c0303g0573321 Helianthus annuus HOM05D000002 ORTHO05D000001 9.5e-07 58.5 88 33.0
TAR042G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 9.5e-07 58.5 91 31.9
TAR180G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 9.5e-07 58.5 78 33.3
Sopen01g020390 Solanum pennellii HOM05D006383 ORTHO05D007815 1.2e-06 58.2 88 29.5
TAR218G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.2e-06 58.2 94 34.0
CsaV3_6G001980 Cucumis sativus L. HOM05D004993 ORTHO05D000001 1.6e-06 57.8 69 43.5
RcHm_v2.0_Chr2g0124571 Rosa chinensis HOM05D000011 ORTHO05D000157 1.6e-06 57.8 130 30.8
RcHm_v2.0_Chr5g0032551 Rosa chinensis HOM05D000002 ORTHO05D000001 1.6e-06 57.8 130 30.8
Atru.chr12.2295 Acer truncatum HOM05D004993 ORTHO05D000001 2.1e-06 57.4 63 42.9
HanXRQChr10g0315391 Helianthus annuus HOM05D000002 ORTHO05D000001 2.1e-06 57.4 156 25.0
Hma1.2p1_1307F.1_g274730 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.1e-06 57.4 92 30.4
MD14G1067200 Malus domestica HOM05D000002 ORTHO05D000001 2.1e-06 57.4 88 33.0
RcHm_v2.0_Chr3g0482021 Rosa chinensis HOM05D000002 ORTHO05D000001 2.1e-06 57.4 89 28.1
FvH4_3g07841 Fragaria vesca HOM05D000002 ORTHO05D000001 2.8e-06 57.0 89 30.3
PSO541G1536 Papaver somniferum HOM05D000002 ORTHO05D000001 2.8e-06 57.0 88 30.7
RcHm_v2.0_Chr5g0038991 Rosa chinensis HOM05D000002 ORTHO05D000001 2.8e-06 57.0 153 28.8
SHI32039 Sapria himalayana HOM05D004993 ORTHO05D000001 2.8e-06 57.0 77 40.3
BolC6t35286H Brassica oleracea HOM05D000002 ORTHO05D000001 3.6e-06 56.6 124 29.8
CANSAT78G1493 Cannabis sativa HOM05D000002 ORTHO05D000001 3.6e-06 56.6 81 32.1
Migut.F01917 Erythranthe guttata HOM05D000002 ORTHO05D000001 3.6e-06 56.6 88 33.0
SHI04431 Sapria himalayana HOM05D004993 ORTHO05D000001 3.6e-06 56.6 67 43.3
FvH4_7g10872 Fragaria vesca HOM05D013433 ORTHO05D000001 4.7e-06 56.2 90 35.6
HanXRQChr01g0008001 Helianthus annuus HOM05D000002 ORTHO05D000001 4.7e-06 56.2 146 27.4
HanXRQChr03g0078371 Helianthus annuus HOM05D000002 ORTHO05D000001 4.7e-06 56.2 95 28.4
RcHm_v2.0_Chr5g0022021 Rosa chinensis HOM05D000002 ORTHO05D000001 4.7e-06 56.2 88 29.5
SHI29111 Sapria himalayana HOM05D004993 ORTHO05D000001 4.7e-06 56.2 68 38.2
FvH4_1g26621 Fragaria vesca HOM05D013433 ORTHO05D000001 6.1e-06 55.8 90 35.6
PSO832G3798 Papaver somniferum HOM05D000002 ORTHO05D000001 6.1e-06 55.8 84 32.1
QL05p006955 Quercus lobata HOM05D026028 ORTHO05D000001 6.1e-06 55.8 89 31.5
RcHm_v2.0_Chr7g0190501 Rosa chinensis HOM05D000002 ORTHO05D000001 6.1e-06 55.8 135 26.7
SHI50795 Sapria himalayana HOM05D004993 ORTHO05D000001 6.1e-06 55.8 67 38.8
SHI51781 Sapria himalayana HOM05D004993 ORTHO05D000001 6.1e-06 55.8 67 38.8
Sopen10g018550 Solanum pennellii HOM05D000002 ORTHO05D000001 6.1e-06 55.8 104 32.7
VMungo0647G0094 Vigna mungo HOM05D000682 ORTHO05D000510 6.1e-06 55.8 77 35.1
Hma1.2p1_2459F.1_g322540 Hydrangea macrophylla HOM05D004993 ORTHO05D012706 8.0e-06 55.5 61 45.9
RcHm_v2.0_Chr2g0129181 Rosa chinensis HOM05D000002 ORTHO05D000001 8.0e-06 55.5 88 31.8
Sopen08g014470 Solanum pennellii HOM05D002431 ORTHO05D000001 8.0e-06 55.5 84 34.5


User provided reference genes

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