Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen12g009350 Solanum pennellii HOM05D004926 ORTHO05D013907 6.4e-120 434.1 222 100.0
Sopen03g025130 Solanum pennellii HOM05D000047 ORTHO05D013907 3.8e-88 328.6 221 79.6
Sopen03g009300 Solanum pennellii HOM05D004926 ORTHO05D013907 6.1e-86 321.2 221 77.4
Sopen04g023930 Solanum pennellii HOM05D004926 ORTHO05D013907 1.1e-82 310.5 209 79.4
PGSC0003DMG400017016 Solanum tuberosum HOM05D004926 ORTHO05D013907 6.3e-75 284.6 190 79.5
Solyc01g015035.1 Solanum lycopersicum HOM05D004926 ORTHO05D013907 7.2e-63 244.6 220 65.5
Sopen10g027680 Solanum pennellii HOM05D004926 ORTHO05D013907 1.3e-59 233.8 221 62.0
Sopen01g011940 Solanum pennellii HOM05D000047 ORTHO05D013907 1.1e-58 230.7 221 60.6
PGSC0003DMG400040719 Solanum tuberosum HOM05D004926 ORTHO05D013907 2.9e-43 179.5 124 78.2
Sopen05g011410 Solanum pennellii HOM05D004926 ORTHO05D013907 2.1e-38 163.3 210 49.0
Solyc12g015923.1 Solanum lycopersicum HOM05D004926 ORTHO05D013907 4.7e-38 162.2 168 58.3
PGSC0003DMG400021467 Solanum tuberosum HOM05D004926 ORTHO05D013907 3.5e-33 146.0 126 61.9
Solyc05g150114.1 Solanum lycopersicum HOM05D004926 ORTHO05D013907 2.5e-23 113.2 113 55.8
Nitab4.5_0002740g0060 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.8e-20 102.1 229 34.1
Nitab4.5_0000727g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.9e-19 99.8 221 33.5
Nitab4.5_0013472g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 7.8e-17 91.7 134 40.3
Solyc05g045675.1 Solanum lycopersicum HOM05D004926 ORTHO05D013907 2.5e-15 86.7 221 33.9
Nitab4.5_0001574g0110 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.8e-14 82.4 149 37.6
Nitab4.5_0000046g0100 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.1e-13 81.3 138 37.0
Nitab4.5_0002765g0070 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.1e-13 81.3 129 36.4
Nitab4.5_0005729g0090 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.1e-13 81.3 129 37.2
Nitab4.5_0000199g0080 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.0e-13 79.3 155 32.3
Nitab4.5_0000068g0360 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.3e-13 79.0 129 36.4
Nitab4.5_0004532g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.5e-12 77.4 228 29.4
Nitab4.5_0009741g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.0e-12 77.0 123 38.2
Nitab4.5_0000326g0140 Nicotiana tabacum HOM05D004926 ORTHO05D006375 9.9e-12 74.7 125 37.6
Nitab4.5_0002664g0100 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.3e-11 74.3 150 35.3
Solyc04g025125.1 Solanum lycopersicum HOM05D004926 ORTHO05D013907 1.3e-11 74.3 112 46.4
Solyc11g150138.1 Solanum lycopersicum HOM05D000047 ORTHO05D013907 1.3e-11 74.3 49 81.6
Nitab4.5_0000068g0110 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.2e-11 73.6 124 38.7
Nitab4.5_0001124g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.1e-10 71.2 125 35.2
Nitab4.5_0003000g0090 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.1e-10 71.2 229 27.9
Nitab4.5_0001392g0080 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.9e-10 70.5 120 36.7
Nitab4.5_0001832g0060 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.2e-10 69.3 129 34.9
Nitab4.5_0002540g0110 Nicotiana tabacum HOM05D004926 ORTHO05D006375 7.1e-10 68.6 125 33.6
Nitab4.5_0013196g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 7.1e-10 68.6 114 36.8
Nitab4.5_0000524g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.2e-09 67.8 120 37.5
Nitab4.5_0002542g0080 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.6e-09 67.4 229 26.6
Nitab4.5_0000587g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.1e-09 67.0 230 26.5
Nitab4.5_0000030g0240 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.7e-09 66.6 119 36.1
Nitab4.5_0000332g0090 Nicotiana tabacum HOM05D004926 ORTHO05D006375 7.9e-09 65.1 116 37.1
Sopen03g019140 Solanum pennellii HOM05D000047 ORTHO05D000044 7.9e-09 65.1 48 70.8
Nitab4.5_0002045g0120 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.3e-08 64.3 146 34.2
Nitab4.5_0000754g0320 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.8e-08 63.9 136 34.6
Nitab4.5_0005446g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.8e-08 63.9 116 37.1
Nitab4.5_0000058g0340 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.0e-08 63.2 99 37.4
Nitab4.5_0001299g0120 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.0e-08 63.2 108 38.0
Sopen12g014880 Solanum pennellii HOM05D000047 ORTHO05D000589 3.9e-08 62.8 55 67.3
Nitab4.5_0007680g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.1e-08 62.4 118 36.4
Nitab4.5_0003692g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 6.7e-08 62.0 212 27.4
Nitab4.5_0009292g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 6.7e-08 62.0 148 32.4
Nitab4.5_0020898g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 6.7e-08 62.0 118 33.1
Nitab4.5_0001843g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 8.7e-08 61.6 105 34.3
Nitab4.5_0028204g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 8.7e-08 61.6 111 35.1
Nitab4.5_0000599g0040 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.1e-07 61.2 100 38.0
Nitab4.5_0022418g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.9e-07 60.5 124 35.5
Nitab4.5_0000593g0250 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.6e-07 58.9 109 36.7
Nitab4.5_0000324g0060 Nicotiana tabacum HOM05D004926 ORTHO05D006375 7.4e-07 58.5 101 38.6
Nitab4.5_0026708g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.3e-06 57.8 147 30.6
Nitab4.5_0005662g0040 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.6e-06 56.2 74 39.2


User provided reference genes

Program Settings