Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen12g008270 Solanum pennellii HOM05D003453 ORTHO05D004154 1.0e-93 347.8 364 100.0
Solyc12g017480.3 Solanum lycopersicum HOM05D003453 ORTHO05D004154 1.6e-91 340.5 365 99.2
PGSC0003DMG400006458 Solanum tuberosum HOM05D003453 ORTHO05D004154 1.6e-75 287.3 318 93.1
Nitab4.5_0001335g0020 Nicotiana tabacum HOM05D003453 ORTHO05D004154 2.4e-63 246.9 317 71.0
Peaxi162Scf00006g02914 Petunia axillaris HOM05D003453 ORTHO05D004154 1.8e-58 230.7 316 74.7
Oeu044656.1 Olea europaea HOM05D003453 ORTHO05D004154 7.0e-55 218.8 316 68.4
Oeu043899.1 Olea europaea HOM05D003453 ORTHO05D004154 3.5e-54 216.5 316 64.6
Oeu035455.1 Olea europaea HOM05D003453 ORTHO05D004154 1.9e-52 210.7 316 63.0
Migut.J00777 Erythranthe guttata HOM05D003453 ORTHO05D004154 9.4e-52 208.4 318 64.8
Cc06_g17230 Coffea canephora HOM05D003453 ORTHO05D004154 1.6e-51 207.6 309 64.1
Medtr4g127120 Medicago truncatula HOM05D003453 ORTHO05D004154 7.0e-47 192.2 317 64.7
FAN12G0296 Fragaria x ananassa HOM05D003453 ORTHO05D004154 1.6e-46 191.0 318 56.9
HanXRQChr05g0142141 Helianthus annuus HOM05D003453 ORTHO05D004154 4.5e-46 189.5 315 69.8
CSS0013411 Camellia sinensis var. sinensis HOM05D003453 ORTHO05D004154 7.7e-46 188.7 319 64.6
CSS0032765 Camellia sinensis var. sinensis HOM05D003453 ORTHO05D004154 7.7e-46 188.7 319 64.6
FAN22G1784 Fragaria x ananassa HOM05D003453 ORTHO05D004154 7.7e-46 188.7 318 56.9
SalBow3G1932 Salvia bowleyana HOM05D003453 ORTHO05D004154 1.1e-44 184.9 319 67.1
PGR044G1644 Punica granatum HOM05D003453 ORTHO05D004154 9.4e-44 181.8 320 61.2
Nn8g40645 Nelumbo nucifera HOM05D003453 ORTHO05D004154 2.7e-43 180.3 319 58.3
Actinidia38507 Actinidia chinensis HOM05D003453 ORTHO05D004154 3.6e-43 179.9 308 62.3
TPR.G5414 Trifolium pratense HOM05D003453 ORTHO05D004154 5.2e-42 176.0 317 59.3
MD13G1241200 Malus domestica HOM05D003453 ORTHO05D004154 6.8e-42 175.6 318 60.1
Dinv25469 Davidia involucrata HOM05D003453 ORTHO05D004154 1.5e-41 174.5 317 64.4
FvH4_4g06910 Fragaria vesca HOM05D003453 ORTHO05D004154 2.0e-41 174.1 318 57.9
FAN17G0675 Fragaria x ananassa HOM05D003453 ORTHO05D004154 2.0e-41 174.1 318 57.5
FAN07G0750 Fragaria x ananassa HOM05D003453 ORTHO05D004154 2.6e-41 173.7 318 57.9
Duzib150G0655 Durio zibethinus HOM05D003453 ORTHO05D004154 4.4e-41 172.9 319 62.7
Thecc.09G192200 Theobroma cacao HOM05D003453 ORTHO05D004154 7.5e-41 172.2 319 60.8
RcHm_v2.0_Chr4g0398811 Rosa chinensis HOM05D003453 ORTHO05D004154 9.8e-41 171.8 318 57.2
VMungo1215G2556 Vigna mungo HOM05D003453 ORTHO05D004154 1.3e-40 171.4 317 60.9
Atru.chr7.914 Acer truncatum HOM05D003453 ORTHO05D004154 4.9e-40 169.5 322 58.4
Haze_22047 Corylus avellana HOM05D003453 ORTHO05D004154 8.3e-40 168.7 325 46.8
MD16G1245200 Malus domestica HOM05D003453 ORTHO05D004154 8.3e-40 168.7 319 59.6
Carub.0004s1475 Capsella rubella HOM05D003453 ORTHO05D004154 1.1e-39 168.3 320 64.4
Ciclev10008785m.g Citrus clementina HOM05D003453 ORTHO05D004154 1.1e-39 168.3 320 60.0
Psat4g014280 Pisum sativum HOM05D003453 ORTHO05D004154 1.4e-39 167.9 319 47.3
ClCG06G013840 Citrullus lanatus HOM05D003453 ORTHO05D004154 1.8e-39 167.5 255 74.1
Prupe.1G072100 Prunus persica HOM05D003453 ORTHO05D004154 1.8e-39 167.5 317 58.4
COL.COLO4_37566 Corchorus olitorius HOM05D003453 ORTHO05D004154 2.4e-39 167.2 326 58.3
Gohir.A13G182300 Gossypium hirsutum HOM05D003453 ORTHO05D004154 3.1e-39 166.8 318 63.2
Cpa.g.sc115.61 Carica papaya HOM05D003453 ORTHO05D004154 9.1e-39 165.2 321 61.4
ECA240G3569 Erigeron canadensis HOM05D003453 ORTHO05D004154 1.2e-38 164.9 311 70.4
Gorai.013G211100 Gossypium raimondii HOM05D003453 ORTHO05D004154 2.0e-38 164.1 318 63.2
Lsat_1_v5_gn_8_68380 Lactuca sativa HOM05D003453 ORTHO05D004154 2.0e-38 164.1 316 70.6
Lj4g0007200 Lotus japonicus HOM05D003453 ORTHO05D004154 2.7e-38 163.7 319 64.3
unitig_578.g15728 Utricularia gibba HOM05D003453 ORTHO05D004154 5.9e-38 162.5 318 51.9
Duzib168G0040 Durio zibethinus HOM05D003453 ORTHO05D004154 7.7e-38 162.2 319 55.2
Phvul.003G139800 Phaseolus vulgaris HOM05D003453 ORTHO05D004154 1.7e-37 161.0 319 62.4
Lalb_Chr13g0299841 Lupinus albus HOM05D003453 ORTHO05D004154 2.9e-37 160.2 321 57.3
TAR625G0633 Trochodendron aralioides HOM05D003453 ORTHO05D004154 2.9e-37 160.2 317 62.8
Glyma.17G057600 Glycine max HOM05D003453 ORTHO05D004154 3.8e-37 159.8 325 62.5
Thhalv10022960m.g Eutrema salsugineum HOM05D003453 ORTHO05D004154 5.0e-37 159.5 320 59.1
Sed0020380 Sechium edule HOM05D003453 ORTHO05D004154 5.0e-37 159.5 316 63.3
TWI32G0581 Tripterygium wilfordii HOM05D003453 ORTHO05D004154 5.0e-37 159.5 316 64.2
GSVIVG01029273001 Vitis vinifera HOM05D003453 ORTHO05D004154 1.5e-36 157.9 310 64.5
DCAR_009479 Daucus carota HOM05D003453 ORTHO05D004154 2.5e-36 157.1 328 56.7
HanXRQChr04g0103791 Helianthus annuus HOM05D003453 ORTHO05D004154 3.3e-36 156.8 314 69.4
DCAR_020142 Daucus carota HOM05D003453 ORTHO05D004154 5.5e-36 156.0 322 54.3
Lju50A41T23 Lonicera japonica HOM05D003453 ORTHO05D004154 5.5e-36 156.0 251 54.2
Lju50A42T20 Lonicera japonica HOM05D003453 ORTHO05D004154 5.5e-36 156.0 251 54.2
Lalb_Chr07g0180741 Lupinus albus HOM05D003453 ORTHO05D004154 5.5e-36 156.0 322 56.2
A03p59300 Brassica napus HOM05D003453 ORTHO05D004154 7.2e-36 155.6 318 62.3
BraA03t14987Z Brassica rapa HOM05D003453 ORTHO05D004154 7.2e-36 155.6 318 62.3
TWI34G1803 Tripterygium wilfordii HOM05D003453 ORTHO05D004154 1.6e-35 154.5 317 63.7
MSTRG.19360 Avicennia marina HOM05D003453 ORTHO05D004154 2.1e-35 154.1 203 68.5
EL10Ac8g19292 Beta vulgaris HOM05D003453 ORTHO05D004154 2.1e-35 154.1 323 57.9
CsaV3_1G032040 Cucumis sativus L. HOM05D003453 ORTHO05D004154 2.8e-35 153.7 316 62.0
AT2G19330 Arabidopsis thaliana HOM05D003453 ORTHO05D004154 3.6e-35 153.3 320 58.1
Gohir.D04G006700 Gossypium hirsutum HOM05D003453 ORTHO05D004154 3.6e-35 153.3 317 55.8
AL3G48980 Arabidopsis lyrata HOM05D003453 ORTHO05D004154 4.7e-35 152.9 320 57.8
Carub.0003s3355 Capsella rubella HOM05D003453 ORTHO05D004154 6.1e-35 152.5 320 58.8
Gorai.012G008100 Gossypium raimondii HOM05D003453 ORTHO05D004154 6.1e-35 152.5 317 51.4
QL02p064658 Quercus lobata HOM05D003453 ORTHO05D004154 6.1e-35 152.5 322 65.8
Lsat_1_v5_gn_7_55120 Lactuca sativa HOM05D003453 ORTHO05D004154 8.0e-35 152.1 318 68.2
Lju432C7T0 Lonicera japonica HOM05D003453 ORTHO05D004154 8.0e-35 152.1 251 53.8
A07p01420 Brassica napus HOM05D003453 ORTHO05D004154 1.0e-34 151.8 320 57.8
C07p02870 Brassica napus HOM05D003453 ORTHO05D004154 1.0e-34 151.8 320 57.8
BolC7t40684H Brassica oleracea HOM05D003453 ORTHO05D004154 1.0e-34 151.8 320 57.8
BraA07t27936Z Brassica rapa HOM05D003453 ORTHO05D004154 1.0e-34 151.8 320 57.8
Ca_21264_v3 Cicer arietinum L. HOM05D003453 ORTHO05D004154 1.0e-34 151.8 317 56.8
Sp3g32700 Schrenkiella parvula HOM05D003453 ORTHO05D004154 1.8e-34 151.0 320 57.5
CiPaw.08G031400 Carya illinoinensis HOM05D003453 ORTHO05D004154 2.3e-34 150.6 321 55.1
THA.LOC104814639 Tarenaya hassleriana HOM05D003453 ORTHO05D004154 2.3e-34 150.6 320 62.8
DCAR_018009 Daucus carota HOM05D003453 ORTHO05D004154 4.0e-34 149.8 330 58.8
Hma1.2p1_0235F.1_g098820 Hydrangea macrophylla HOM05D003453 ORTHO05D004154 4.0e-34 149.8 270 64.4
SGA_v2.0_scaffold31G12781 Striga asiatica HOM05D003453 ORTHO05D004154 5.2e-34 149.4 318 56.9
Potri.006G072700 Populus trichocarpa HOM05D003453 ORTHO05D004154 6.8e-34 149.1 337 57.9
ATR0580G242 Amborella trichopoda HOM05D003453 ORTHO05D004154 8.9e-34 148.7 315 68.3
Duzib170G0719 Durio zibethinus HOM05D003453 ORTHO05D004154 1.2e-33 148.3 320 63.1
BcaB03g16722 Brassica carinata HOM05D003453 ORTHO05D004154 2.6e-33 147.1 320 56.9
ECA236G3452 Erigeron canadensis HOM05D003453 ORTHO05D004154 5.7e-33 146.0 321 66.7
Sc08g0004730 Simmondsia chinensis HOM05D003453 ORTHO05D004154 9.8e-33 145.2 363 42.7
CDE05G1169 Ceratophyllum demersum HOM05D003453 ORTHO05D004154 1.3e-32 144.8 318 49.1
Thhalv10027502m.g Eutrema salsugineum HOM05D003453 ORTHO05D004154 1.3e-32 144.8 320 61.9
Hund24523 Selenicereus undatus HOM05D003453 ORTHO05D004154 1.7e-32 144.4 298 61.4
CDE02G3632 Ceratophyllum demersum HOM05D003453 ORTHO05D004154 2.2e-32 144.1 313 58.5
Ah.09g228510 Amaranthus hybridus HOM05D003453 ORTHO05D004154 3.7e-32 143.3 318 60.1
Carub.0007s1491 Capsella rubella HOM05D003453 ORTHO05D004154 4.9e-32 142.9 321 63.2
AL7G22370 Arabidopsis lyrata HOM05D003453 ORTHO05D004154 6.3e-32 142.5 320 61.6
Gohir.A05G408700 Gossypium hirsutum HOM05D003453 ORTHO05D004154 6.3e-32 142.5 306 56.2
CARHR109780 Cardamine hirsuta HOM05D003453 ORTHO05D004154 8.3e-32 142.1 320 56.2
MBI16_g09350_MAGBIO Magnolia biondii HOM05D003453 ORTHO05D004154 8.3e-32 142.1 315 62.2
C07p54660 Brassica napus HOM05D003453 ORTHO05D004154 1.4e-31 141.4 332 53.3
BolC7t45955H Brassica oleracea HOM05D003453 ORTHO05D004154 1.4e-31 141.4 332 53.3
ClCG11G011550 Citrullus lanatus HOM05D003453 ORTHO05D004154 2.4e-31 140.6 322 59.0
CARHR237770 Cardamine hirsuta HOM05D003453 ORTHO05D004154 5.4e-31 139.4 319 64.3
CDE05G3189 Ceratophyllum demersum HOM05D003453 ORTHO05D004154 5.4e-31 139.4 318 56.3
Manes.06G017500 Manihot esculenta HOM05D003453 ORTHO05D004154 7.0e-31 139.0 310 67.1
Aa31LG3G390 Aethionema arabicum HOM05D003453 ORTHO05D004154 9.2e-31 138.7 265 57.7
Sabra06G0054100 Salix brachista HOM05D003453 ORTHO05D004154 1.2e-30 138.3 336 57.4
Aqoxy7G02898 Aquilegia oxysepala HOM05D003453 ORTHO05D004154 1.6e-30 137.9 315 61.3
Aa31LG8G16370 Aethionema arabicum HOM05D003453 ORTHO05D004154 2.7e-30 137.1 330 54.2
Potri.018G139700 Populus trichocarpa HOM05D003453 ORTHO05D004154 2.7e-30 137.1 331 57.4
AT4G29880 Arabidopsis thaliana HOM05D003453 ORTHO05D004154 3.5e-30 136.7 320 60.3
Manes.14G161200 Manihot esculenta HOM05D003453 ORTHO05D004154 5.9e-30 136.0 321 60.1
Eucgr.C02218 Eucalyptus grandis HOM05D003453 ORTHO05D004154 2.9e-29 133.7 319 58.6
AUR62027430 Chenopodium quinoa HOM05D003453 ORTHO05D004154 3.9e-29 133.3 328 42.7
Actinidia29965 Actinidia chinensis HOM05D003453 ORTHO05D004154 1.1e-28 131.7 186 47.8
PSO170G1153 Papaver somniferum HOM05D003453 ORTHO05D004154 1.1e-28 131.7 309 61.5
Ca_02128_v3 Cicer arietinum L. HOM05D003453 ORTHO05D004154 1.5e-28 131.3 310 63.9
Thhalv10025419m.g Eutrema salsugineum HOM05D003453 ORTHO05D004154 1.5e-28 131.3 328 60.7
THA.LOC104817769 Tarenaya hassleriana HOM05D003453 ORTHO05D004154 1.5e-28 131.3 330 56.4
arahy.Tifrunner.gnm1.ann1.JP7J3T Arachis hypogaea HOM05D003453 ORTHO05D004154 4.3e-28 129.8 324 47.2
CiPaw.07G199200 Carya illinoinensis HOM05D003453 ORTHO05D004154 4.3e-28 129.8 211 56.4
PSO063G4618 Papaver somniferum HOM05D003453 ORTHO05D004154 4.3e-28 129.8 309 61.5
Eucgr.C00085 Eucalyptus grandis HOM05D003453 ORTHO05D004154 1.6e-27 127.9 298 55.0
Rhsim03G0267900 Rhododendron simsii HOM05D003453 ORTHO05D004154 1.6e-27 127.9 304 71.1
CANSAT11G2669 Cannabis sativa HOM05D003453 ORTHO05D004154 2.8e-27 127.1 332 58.1
Glyma.15G167800 Glycine max HOM05D003453 ORTHO05D004154 2.8e-27 127.1 311 55.6
Eucgr.C00084 Eucalyptus grandis HOM05D003453 ORTHO05D004154 1.0e-26 125.2 298 59.4
Glyma.09G061500 Glycine max HOM05D003453 ORTHO05D004154 1.0e-26 125.2 311 55.3
BcaC06g32772 Brassica carinata HOM05D003453 ORTHO05D004154 1.4e-26 124.8 332 59.3
HanXRQChr09g0245371 Helianthus annuus HOM05D003453 ORTHO05D004154 1.8e-26 124.4 313 57.2
Lalb_Chr23g0276711 Lupinus albus HOM05D003453 ORTHO05D004154 3.1e-26 123.6 313 52.4
Psat1g142440 Pisum sativum HOM05D003453 ORTHO05D004154 5.2e-26 122.9 316 63.6
CsaV3_2G008970 Cucumis sativus L. HOM05D003453 ORTHO05D004154 6.8e-26 122.5 322 55.0
SHI03070 Sapria himalayana HOM05D003453 ORTHO05D004154 8.9e-26 122.1 309 42.1
A03p56450 Brassica napus HOM05D003453 ORTHO05D004154 1.2e-25 121.7 332 56.6
Sabra18G0114200 Salix brachista HOM05D003453 ORTHO05D004154 1.2e-25 121.7 322 54.0
Lj6g0025589 Lotus japonicus HOM05D003453 ORTHO05D004154 1.5e-25 121.3 316 53.2
MBI14_g10728_MAGBIO Magnolia biondii HOM05D003453 ORTHO05D004154 2.0e-25 120.9 200 54.5
Phvul.009G234500 Phaseolus vulgaris HOM05D003453 ORTHO05D004154 2.0e-25 120.9 315 54.0
AT4G26050 Arabidopsis thaliana HOM05D003453 ORTHO05D004154 2.6e-25 120.6 321 59.8
Oeu012385.1 Olea europaea HOM05D003453 ORTHO05D004154 3.4e-25 120.2 93 60.2
Rhsim02G0202600 Rhododendron simsii HOM05D003453 ORTHO05D004154 3.4e-25 120.2 321 60.7
Sed0024940 Sechium edule HOM05D003453 ORTHO05D004154 4.4e-25 119.8 316 57.6
TPR.G2523 Trifolium pratense HOM05D003453 ORTHO05D004154 4.4e-25 119.8 311 59.8
PGR018G0002 Punica granatum HOM05D003453 ORTHO05D004154 5.8e-25 119.4 324 63.6
PGR142G3132 Punica granatum HOM05D003453 ORTHO05D004154 5.8e-25 119.4 324 63.6
PGR142G4131 Punica granatum HOM05D003453 ORTHO05D004154 5.8e-25 119.4 324 63.6
C01p21810 Brassica napus HOM05D003453 ORTHO05D004154 7.5e-25 119.0 308 61.4
BcaNung00498 Brassica carinata HOM05D003453 ORTHO05D004154 1.7e-24 117.9 318 56.6
CARHR233550 Cardamine hirsuta HOM05D003453 ORTHO05D004154 1.7e-24 117.9 320 60.0
VMungo1309G3166 Vigna mungo HOM05D003453 ORTHO05D004154 1.7e-24 117.9 310 59.0
BraA03t14715Z Brassica rapa HOM05D003453 ORTHO05D004154 2.2e-24 117.5 336 45.5
AL7G26940 Arabidopsis lyrata HOM05D003453 ORTHO05D004154 2.9e-24 117.1 321 58.9
Sp7g27690 Schrenkiella parvula HOM05D003453 ORTHO05D004154 2.9e-24 117.1 320 62.5
A01p17310 Brassica napus HOM05D003453 ORTHO05D004154 6.4e-24 115.9 332 58.4
BraA01t01686Z Brassica rapa HOM05D003453 ORTHO05D004154 6.4e-24 115.9 332 58.4
Medtr2g038380 Medicago truncatula HOM05D003453 ORTHO05D004154 8.3e-24 115.5 312 58.7
Aa31LG2G20670 Aethionema arabicum HOM05D003453 ORTHO05D004154 1.1e-23 115.2 163 55.2
PSO063G7373 Papaver somniferum HOM05D003453 ORTHO05D004154 1.1e-23 115.2 321 56.1
arahy.Tifrunner.gnm1.ann1.N816GG Arachis hypogaea HOM05D003453 ORTHO05D004154 2.4e-23 114.0 295 55.6
MELO3C003949.2 Cucumis melo HOM05D003453 ORTHO05D004154 2.4e-23 114.0 322 56.8
AUR62031265 Chenopodium quinoa HOM05D003453 ORTHO05D004154 3.2e-23 113.6 219 52.5
Psat1g142960 Pisum sativum HOM05D003453 ORTHO05D004154 3.2e-23 113.6 312 59.6
arahy.Tifrunner.gnm1.ann1.3E2B2N Arachis hypogaea HOM05D003453 ORTHO05D004154 4.1e-23 113.2 295 55.6
BolC1t02107H Brassica oleracea HOM05D003453 ORTHO05D004154 9.2e-23 112.1 307 60.9
BolC7t46200H Brassica oleracea HOM05D003453 ORTHO05D004154 9.2e-23 112.1 318 59.1
arahy.Tifrunner.gnm1.ann1.SX1TLQ Arachis hypogaea HOM05D003453 ORTHO05D004154 1.6e-22 111.3 324 48.1
Os04g0605300 Oryza sativa ssp. japonica HOM05D003453 ORTHO05D004154 1.6e-22 111.3 313 60.4
C07p57310 Brassica napus HOM05D003453 ORTHO05D004154 2.0e-22 110.9 318 58.8
vmacro22287 Vaccinium macrocarpon HOM05D003453 ORTHO05D004154 2.5e-20 104.0 196 59.2
Gohir.D13G185000 Gossypium hirsutum HOM05D003453 ORTHO05D004154 5.6e-20 102.8 256 69.1
SHI33663 Sapria himalayana HOM05D003453 ORTHO05D004154 2.1e-19 100.9 201 51.7
Zm00001eb071570 Zea mays HOM05D003453 ORTHO05D004154 1.1e-18 98.6 324 58.6
BcaC06g36564 Brassica carinata HOM05D003453 ORTHO05D004154 2.9e-16 90.5 251 59.4
Sed0001635 Sechium edule HOM05D003453 ORTHO05D004154 2.9e-16 90.5 239 49.0
CDE04G2437 Ceratophyllum demersum HOM05D002648 ORTHO05D002899 1.5e-12 78.2 254 60.6
SpUn0235_0010 Schrenkiella parvula HOM05D003453 ORTHO05D004154 9.5e-12 75.5 229 71.2
MELO3C029529.2 Cucumis melo HOM05D003453 ORTHO05D004154 4.7e-11 73.2 80 48.8
Sc14g0003130 Simmondsia chinensis HOM05D003453 ORTHO05D004154 1.4e-10 71.6 327 61.2
BcaB08g34854 Brassica carinata HOM05D003453 ORTHO05D004154 5.2e-10 69.7 116 54.3
SEGI_15755 Sequoiadendron giganteum HOM05D003453 ORTHO05D004154 3.4e-09 67.0 152 57.9
HPP92_010787 Vanilla planifolia HOM05D003453 ORTHO05D004154 4.9e-08 63.2 316 52.5


User provided reference genes

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