Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen12g006890 Solanum pennellii HOM05D008538 ORTHO05D010142 3.2e-93 345.1 182 100.0
Solyc12g013540.2 Solanum lycopersicum HOM05D008538 ORTHO05D010142 1.1e-90 336.7 182 97.8
PGSC0003DMG403008565 Solanum tuberosum HOM05D008538 ORTHO05D010142 2.2e-89 332.4 182 96.2
CAN.G1320.13 Capsicum annuum HOM05D008538 ORTHO05D010142 2.0e-71 272.7 186 81.7
Nitab4.5_0000662g0010 Nicotiana tabacum HOM05D008538 ORTHO05D010142 4.0e-67 258.5 184 81.0
Nitab4.5_0005141g0010 Nicotiana tabacum HOM05D008538 ORTHO05D010142 1.3e-65 253.4 184 79.3
Nitab4.5_0000207g0250 Nicotiana tabacum HOM05D008538 ORTHO05D010142 1.5e-61 240.0 185 71.9
PGSC0003DMG400025004 Solanum tuberosum HOM05D008538 ORTHO05D010142 3.6e-60 235.3 186 71.5
Peaxi162Scf00000g00508 Petunia axillaris HOM05D008538 ORTHO05D010142 1.8e-51 206.5 182 65.9
Nitab4.5_0001320g0090 Nicotiana tabacum HOM05D008538 ORTHO05D010142 9.8e-42 174.1 185 56.8
PGSC0003DMG402008565 Solanum tuberosum HOM05D008666 ORTHO05D009871 5.8e-34 148.3 94 86.2
Dinv08337 Davidia involucrata HOM05D008538 ORTHO05D010142 1.2e-28 130.6 189 46.0
Cc05_g12630 Coffea canephora HOM05D008538 ORTHO05D010142 4.9e-25 118.6 193 42.5
Actinidia18751 Actinidia chinensis HOM05D008538 ORTHO05D010142 5.4e-24 115.2 189 44.4
Hma1.2p1_1003F.1_g246760 Hydrangea macrophylla HOM05D008538 ORTHO05D010142 6.6e-22 108.2 196 40.3
CSS0046110 Camellia sinensis var. sinensis HOM05D008538 ORTHO05D010142 1.5e-21 107.1 198 40.9
CSS0013852 Camellia sinensis var. sinensis HOM05D008538 ORTHO05D010142 1.3e-20 104.0 198 40.4
Nitab4.5_0003395g0040 Nicotiana tabacum HOM05D008538 ORTHO05D010142 6.9e-19 98.2 82 64.6
Lsat_1_v5_gn_5_6940 Lactuca sativa HOM05D008538 ORTHO05D010142 1.5e-13 80.5 185 36.2
Cfa020514 Carpinus fangiana HOM05D008538 ORTHO05D010142 9.0e-11 71.2 145 40.7
vmacro09554 Vaccinium macrocarpon HOM05D008538 ORTHO05D010142 9.0e-11 71.2 274 28.5
Haze_09520 Corylus avellana HOM05D008538 ORTHO05D010142 2.0e-10 70.1 136 41.2
ECA246G3043 Erigeron canadensis HOM05D008538 ORTHO05D010142 4.5e-10 68.9 127 43.3
MD03G1219700 Malus domestica HOM05D008538 ORTHO05D010142 7.6e-10 68.2 130 38.5
FvH4_3g20870 Fragaria vesca HOM05D008538 ORTHO05D010142 8.4e-09 64.7 130 41.5
FAN11G3526 Fragaria x ananassa HOM05D008538 ORTHO05D010142 8.4e-09 64.7 130 41.5
FAN21G1320 Fragaria x ananassa HOM05D008538 ORTHO05D010142 8.4e-09 64.7 130 41.5
Lj8C159G11 Lonicera japonica HOM05D008538 ORTHO05D010142 1.1e-08 64.3 211 29.9
Rhsim04G0018000 Rhododendron simsii HOM05D008538 ORTHO05D010142 1.1e-08 64.3 99 40.4
MSTRG.6852 Avicennia marina HOM05D008538 ORTHO05D010142 1.4e-08 63.9 114 42.1
FAN25G2351 Fragaria x ananassa HOM05D001272 ORTHO05D001843 1.9e-08 63.5 172 36.6
TWI39G0570 Tripterygium wilfordii HOM05D008538 ORTHO05D010142 4.2e-08 62.4 124 39.5
HanXRQChr08g0234631 Helianthus annuus HOM05D008538 ORTHO05D010142 1.2e-07 60.8 124 40.3
MBI18_g11118_MAGBIO Magnolia biondii HOM05D008666 ORTHO05D009871 2.1e-07 60.1 118 33.9
Atru.chr2.2829 Acer truncatum HOM05D008538 ORTHO05D010142 4.6e-07 58.9 133 36.8
Prupe.4G189200 Prunus persica HOM05D008538 ORTHO05D010142 1.3e-06 57.4 135 35.6


User provided reference genes

Program Settings