Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen12g005770 Solanum pennellii HOM05D006058 ORTHO05D007686 2.7e-76 288.5 137 100.0
Solyc12g014020.2 Solanum lycopersicum HOM05D006058 ORTHO05D007686 2.3e-75 285.4 137 99.3
PGSC0003DMG400015370 Solanum tuberosum HOM05D006058 ORTHO05D007686 3.3e-74 281.6 137 97.8
Peaxi162Scf00273g00034 Petunia axillaris HOM05D006058 ORTHO05D007686 1.2e-55 219.9 125 84.8
Nitab4.5_0009592g0010 Nicotiana tabacum HOM05D006058 ORTHO05D007686 2.0e-55 219.2 125 85.6
Nitab4.5_0001499g0140 Nicotiana tabacum HOM05D006058 ORTHO05D007686 1.7e-54 216.1 125 84.8
Nitab4.5_0004672g0030 Nicotiana tabacum HOM05D006058 ORTHO05D007686 2.9e-54 215.3 133 79.7
Peaxi162Scf00026g00313 Petunia axillaris HOM05D006058 ORTHO05D007686 7.1e-53 210.7 125 84.0
Oeu032852.1 Olea europaea HOM05D006058 ORTHO05D007686 1.3e-51 206.5 124 81.5
TWI23G1093 Tripterygium wilfordii HOM05D006058 ORTHO05D007686 1.1e-50 203.4 124 79.0
CSS0022820 Camellia sinensis var. sinensis HOM05D006058 ORTHO05D007686 4.3e-50 201.4 121 80.2
GSVIVG01011025001 Vitis vinifera HOM05D006058 ORTHO05D007686 2.8e-49 198.7 124 76.6
vmacro02518 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 6.3e-49 197.6 121 80.2
SGA_v2.0_scaffold130G34295 Striga asiatica HOM05D006058 ORTHO05D007686 8.2e-49 197.2 130 73.8
Actinidia00707 Actinidia chinensis HOM05D006058 ORTHO05D007686 1.1e-48 196.8 118 80.5
vmacro04594 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 1.4e-48 196.4 133 73.7
Rhsim13G0018500 Rhododendron simsii HOM05D003625 ORTHO05D004382 1.8e-48 196.1 121 79.3
Hma1.2p1_0399F.1_g144340 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 2.4e-48 195.7 124 76.6
TPR.G16722 Trifolium pratense HOM05D006058 ORTHO05D007686 4.1e-48 194.9 124 75.0
CAN.G964.10 Capsicum annuum HOM05D006058 ORTHO05D007686 5.3e-48 194.5 140 71.4
DCAR_018372 Daucus carota HOM05D006058 ORTHO05D007686 5.3e-48 194.5 124 75.8
Lalb_Chr07g0187491 Lupinus albus HOM05D006058 ORTHO05D007686 5.3e-48 194.5 124 76.6
RcHm_v2.0_Chr6g0292311 Rosa chinensis HOM05D006058 ORTHO05D007686 5.3e-48 194.5 124 75.0
Psat4g228760 Pisum sativum HOM05D006058 ORTHO05D007686 1.2e-47 193.4 124 73.4
Sc26g0003460 Simmondsia chinensis HOM05D006058 ORTHO05D007686 1.2e-47 193.4 124 75.0
Hma1.2p1_1049F.1_g251900 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 1.5e-47 193.0 124 75.8
PGR119G2453 Punica granatum HOM05D006058 ORTHO05D007686 1.5e-47 193.0 125 76.8
Medtr3g010210 Medicago truncatula HOM05D006058 ORTHO05D007686 2.6e-47 192.2 124 71.8
Hund02088 Selenicereus undatus HOM05D006058 ORTHO05D007686 2.6e-47 192.2 134 70.9
TAR636G0052 Trochodendron aralioides HOM05D006058 ORTHO05D007686 2.6e-47 192.2 121 77.7
Nn4g26080 Nelumbo nucifera HOM05D006058 ORTHO05D007686 3.4e-47 191.8 134 71.6
TPR.G8807 Trifolium pratense HOM05D006058 ORTHO05D007686 4.5e-47 191.4 124 72.6
Lj2g0026207 Lotus japonicus HOM05D006058 ORTHO05D007686 5.9e-47 191.0 124 74.2
Ca_03230_v3 Cicer arietinum L. HOM05D006058 ORTHO05D007686 1.3e-46 189.9 124 74.2
Manes.07G087200 Manihot esculenta HOM05D006058 ORTHO05D007686 2.2e-46 189.1 121 76.0
Potri.014G083500 Populus trichocarpa HOM05D006058 ORTHO05D007686 2.2e-46 189.1 121 76.0
Hund29081 Selenicereus undatus HOM05D006058 ORTHO05D007686 2.9e-46 188.7 124 71.8
Hund29083 Selenicereus undatus HOM05D006058 ORTHO05D007686 2.9e-46 188.7 124 71.8
CANSAT25G3509 Cannabis sativa HOM05D006058 ORTHO05D007686 3.8e-46 188.3 127 70.9
Ah.10g033440 Amaranthus hybridus HOM05D006058 ORTHO05D007686 6.5e-46 187.6 121 73.6
Duzib211G0114 Durio zibethinus HOM05D006058 ORTHO05D007686 6.5e-46 187.6 134 70.1
unitig_0.g1187 Utricularia gibba HOM05D006058 ORTHO05D007686 6.5e-46 187.6 124 69.4
arahy.Tifrunner.gnm1.ann1.Y2QWLJ Arachis hypogaea HOM05D006058 ORTHO05D007686 8.5e-46 187.2 119 75.6
FvH4_2g24470 Fragaria vesca HOM05D006058 ORTHO05D007686 8.5e-46 187.2 124 73.4
FAN27G3183 Fragaria x ananassa HOM05D006058 ORTHO05D007686 8.5e-46 187.2 124 73.4
FAN24G0575 Fragaria x ananassa HOM05D006058 ORTHO05D007686 1.1e-45 186.8 124 73.4
HanXRQChr03g0093951 Helianthus annuus HOM05D006058 ORTHO05D007686 1.1e-45 186.8 136 69.9
arahy.Tifrunner.gnm1.ann1.SHER6S Arachis hypogaea HOM05D006058 ORTHO05D007686 1.4e-45 186.4 119 75.6
Eucgr.H01614 Eucalyptus grandis HOM05D006058 ORTHO05D007686 1.9e-45 186.0 124 71.8
Thecc.01G288100 Theobroma cacao HOM05D006058 ORTHO05D007686 2.5e-45 185.7 134 69.4
AUR62036672 Chenopodium quinoa HOM05D006058 ORTHO05D007686 3.2e-45 185.3 124 71.8
CiPaw.07G098200 Carya illinoinensis HOM05D006058 ORTHO05D007686 4.2e-45 184.9 121 76.9
MD04G1200100 Malus domestica HOM05D006058 ORTHO05D007686 7.2e-45 184.1 127 70.9
MD12G1212600 Malus domestica HOM05D006058 ORTHO05D007686 9.4e-45 183.7 127 70.9
Aqoxy4G03219 Aquilegia oxysepala HOM05D006058 ORTHO05D007686 1.2e-44 183.3 121 73.6
MELO3C015303.2 Cucumis melo HOM05D006058 ORTHO05D007686 2.1e-44 182.6 121 72.7
CsaV3_1G038790 Cucumis sativus L. HOM05D006058 ORTHO05D007686 2.1e-44 182.6 121 72.7
MBI07_g41269_MAGBIO Magnolia biondii HOM05D006058 ORTHO05D007686 2.7e-44 182.2 118 77.1
Prupe.8G268000 Prunus persica HOM05D006058 ORTHO05D007686 2.7e-44 182.2 127 70.9
Cfa006057 Carpinus fangiana HOM05D006058 ORTHO05D007686 3.6e-44 181.8 118 75.4
CDE02G3716 Ceratophyllum demersum HOM05D006058 ORTHO05D007686 3.6e-44 181.8 130 65.4
Glyma.01G089000 Glycine max HOM05D006058 ORTHO05D007686 3.6e-44 181.8 124 70.2
Glyma.04G146600 Glycine max HOM05D006058 ORTHO05D007686 3.6e-44 181.8 124 70.2
Sabra02G0198900 Salix brachista HOM05D006058 ORTHO05D007686 3.6e-44 181.8 124 72.6
Cc01_g20070 Coffea canephora HOM05D006058 ORTHO05D007686 7.9e-44 180.6 119 72.3
COL.COLO4_08051 Corchorus olitorius HOM05D006058 ORTHO05D007686 1.4e-43 179.9 121 72.7
BraA06t25979Z Brassica rapa HOM05D006058 ORTHO05D007686 2.3e-43 179.1 122 68.0
BolC3t18529H Brassica oleracea HOM05D006058 ORTHO05D007686 5.1e-43 177.9 122 67.2
HanXRQChr15g0476421 Helianthus annuus HOM05D006058 ORTHO05D007686 5.1e-43 177.9 135 65.9
Phvul.002G050500 Phaseolus vulgaris HOM05D006058 ORTHO05D007686 5.1e-43 177.9 124 68.5
BcaC01g02630 Brassica carinata HOM05D006058 ORTHO05D007686 6.7e-43 177.6 122 67.2
A06p30300 Brassica napus HOM05D006058 ORTHO05D007686 6.7e-43 177.6 122 67.2
C03p62750 Brassica napus HOM05D006058 ORTHO05D007686 6.7e-43 177.6 122 67.2
Carub.0008s2446 Capsella rubella HOM05D006058 ORTHO05D007686 6.7e-43 177.6 124 66.1
CARHR277600 Cardamine hirsuta HOM05D006058 ORTHO05D007686 8.8e-43 177.2 132 65.9
AT5G63690 Arabidopsis thaliana HOM05D006058 ORTHO05D007686 2.5e-42 175.6 122 65.6
Aa31LG10G11090 Aethionema arabicum HOM05D006058 ORTHO05D007686 3.3e-42 175.3 131 64.9
Gohir.A12G007700 Gossypium hirsutum HOM05D006058 ORTHO05D007686 3.3e-42 175.3 131 65.6
Lju470C11T9 Lonicera japonica HOM05D006058 ORTHO05D007686 3.3e-42 175.3 119 72.3
QL12p042454 Quercus lobata HOM05D006058 ORTHO05D007686 3.3e-42 175.3 121 73.6
TPR.G22635 Trifolium pratense HOM05D006058 ORTHO05D007686 3.3e-42 175.3 124 66.9
Sp2g26790 Schrenkiella parvula HOM05D006058 ORTHO05D007686 4.3e-42 174.9 124 67.7
Atru.chr5.1299 Acer truncatum HOM05D006058 ORTHO05D007686 7.4e-42 174.1 126 70.6
AL8G40840 Arabidopsis lyrata HOM05D006058 ORTHO05D007686 7.4e-42 174.1 122 67.2
VMungo1215G3318 Vigna mungo HOM05D006058 ORTHO05D007686 7.4e-42 174.1 122 68.0
SalBow3G0902 Salvia bowleyana HOM05D006058 ORTHO05D007686 9.7e-42 173.7 124 66.9
BcaB02g09737 Brassica carinata HOM05D006058 ORTHO05D007686 1.7e-41 172.9 124 66.1
Ciclev10022776m.g Citrus clementina HOM05D006058 ORTHO05D007686 1.7e-41 172.9 117 71.8
Thhalv10005102m.g Eutrema salsugineum HOM05D006058 ORTHO05D007686 1.7e-41 172.9 128 64.8
PSO170G2912 Papaver somniferum HOM05D006058 ORTHO05D007686 1.7e-41 172.9 122 69.7
PSO407G0089 Papaver somniferum HOM05D006058 ORTHO05D007686 1.7e-41 172.9 122 70.5
Gohir.D12G007100 Gossypium hirsutum HOM05D006058 ORTHO05D007686 2.2e-41 172.6 131 64.1
BcaC03g18221 Brassica carinata HOM05D006058 ORTHO05D007686 6.3e-41 171.0 125 65.6
Gorai.008G007300 Gossypium raimondii HOM05D006058 ORTHO05D007686 6.3e-41 171.0 131 63.4
BolC2t12363H Brassica oleracea HOM05D006058 ORTHO05D007686 8.2e-41 170.6 125 65.6
THA.LOC104826323 Tarenaya hassleriana HOM05D006058 ORTHO05D007686 1.1e-40 170.2 121 66.9
BcaB07g29701 Brassica carinata HOM05D006058 ORTHO05D007686 9.1e-40 167.2 125 64.8
A02p42950 Brassica napus HOM05D006058 ORTHO05D007686 1.5e-39 166.4 125 64.8
Prupe.3G123100 Prunus persica HOM05D006058 ORTHO05D007686 5.9e-39 164.5 124 67.7
ECA240G0292 Erigeron canadensis HOM05D006058 ORTHO05D007686 7.7e-39 164.1 118 69.5
SHI14488 Sapria himalayana HOM05D006058 ORTHO05D007686 1.0e-38 163.7 138 62.3
SEGI_21939 Sequoiadendron giganteum HOM05D006058 ORTHO05D007686 2.2e-38 162.5 122 60.7
C02p62900 Brassica napus HOM05D006058 ORTHO05D007686 2.9e-38 162.2 124 62.9
Manes.10G061700 Manihot esculenta HOM05D006058 ORTHO05D007686 1.1e-37 160.2 118 68.6
Migut.D00240 Erythranthe guttata HOM05D006058 ORTHO05D007686 4.2e-37 158.3 127 62.2
BraA02t09218Z Brassica rapa HOM05D006058 ORTHO05D007686 2.7e-36 155.6 119 63.0
Prupe.8G250400 Prunus persica HOM05D006058 ORTHO05D007686 7.9e-36 154.1 95 75.8
HPP92_016068 Vanilla planifolia HOM05D006058 ORTHO05D007686 7.9e-36 154.1 134 59.0
EL10Ac7g17168 Beta vulgaris HOM05D006058 ORTHO05D007686 2.3e-35 152.5 124 62.1
Nn3g21231 Nelumbo nucifera HOM05D006058 ORTHO05D007686 3.0e-35 152.1 105 71.4
Zm00001eb106990 Zea mays HOM05D006058 ORTHO05D007686 3.9e-35 151.8 120 63.3
ClCG03G017360 Citrullus lanatus HOM05D006058 ORTHO05D007686 6.7e-35 151.0 106 70.8
Pp3c3_34830 Physcomitrium patens HOM05D006058 ORTHO05D007686 2.6e-34 149.1 130 53.1
Sed0020474 Sechium edule HOM05D006058 ORTHO05D007686 1.7e-33 146.4 96 72.9
ATR0225G019 Amborella trichopoda HOM05D006058 ORTHO05D007686 2.8e-33 145.6 112 64.3
SMO244G0033 Selaginella moellendorffii HOM05D006058 ORTHO05D007686 1.4e-32 143.3 128 53.9
AagrBONN_evm.TU.Sc2ySwM_369.269 Anthoceros agrestis HOM05D006058 ORTHO05D007686 3.1e-32 142.1 123 54.5
Mapoly0122s0023 Marchantia polymorpha HOM05D006058 ORTHO05D007686 3.1e-32 142.1 134 49.3
Mapoly0068s0046 Marchantia polymorpha HOM05D006058 ORTHO05D007686 7.0e-32 141.0 125 53.6
EL10Ac3g06921 Beta vulgaris HOM05D006058 ORTHO05D007686 1.2e-31 140.2 95 70.5
AUR62034597 Chenopodium quinoa HOM05D006058 ORTHO05D007686 1.2e-31 140.2 98 70.4
CBR_g26410 Chara braunii HOM05D006058 ORTHO05D007686 2.9e-30 135.6 118 55.1
Eucgr.H01617 Eucalyptus grandis HOM05D006058 ORTHO05D007686 2.1e-28 129.4 124 54.8
Sc05g0004330 Simmondsia chinensis HOM05D006058 ORTHO05D007686 1.5e-26 123.2 89 66.3
BolC4t22707H Brassica oleracea HOM05D006058 ORTHO05D007686 5.7e-26 121.3 78 69.2
TAR365G0318 Trochodendron aralioides HOM05D006058 ORTHO05D007686 1.2e-23 113.6 93 60.2
CBR_g24266 Chara braunii HOM05D006058 ORTHO05D007686 7.7e-23 110.9 120 45.8
Aa31LG1G18150 Aethionema arabicum HOM05D000706 ORTHO05D001554 1.7e-22 109.8 81 64.2
MBI07_g41268_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 2.7e-15 85.9 79 58.2
QL12p023442 Quercus lobata HOM05D006058 ORTHO05D007686 3.8e-14 82.0 71 56.3
vmacro09159 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 7.2e-13 77.8 56 67.9
CAN.G27.69 Capsicum annuum HOM05D005779 ORTHO05D007040 6.8e-11 71.2 58 58.6


User provided reference genes

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