Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen12g005120 Solanum pennellii HOM05D003067 ORTHO05D009378 2.0e-146 522.3 252 100.0
Solyc12g010230.2 Solanum lycopersicum HOM05D003067 ORTHO05D009378 2.8e-143 511.9 259 96.5
CAN.G551.28 Capsicum annuum HOM05D003067 ORTHO05D009378 4.1e-123 444.9 259 82.6
Nitab4.5_0001478g0120 Nicotiana tabacum HOM05D003067 ORTHO05D009378 5.8e-117 424.5 259 79.5
Peaxi162Scf00108g00714 Petunia axillaris HOM05D003067 ORTHO05D009378 4.6e-98 361.7 264 71.2
Nitab4.5_0002315g0060 Nicotiana tabacum HOM05D003067 ORTHO05D009378 4.5e-93 345.1 259 68.7
PGSC0003DMG400007894 Solanum tuberosum HOM05D003067 ORTHO05D009378 8.7e-81 304.3 173 88.4
Hma1.2p1_0028F.1_g017380 Hydrangea macrophylla HOM05D003067 ORTHO05D009378 7.2e-67 258.1 250 50.8
Dinv41400 Davidia involucrata HOM05D003067 ORTHO05D009378 7.0e-62 241.5 229 52.8
Ciclev10009097m.g Citrus clementina HOM05D003067 ORTHO05D009378 3.5e-61 239.2 247 49.4
Nitab4.5_0000525g0300 Nicotiana tabacum HOM05D003067 ORTHO05D009378 4.5e-61 238.8 191 64.4
Actinidia38680 Actinidia chinensis HOM05D003067 ORTHO05D009378 8.5e-60 234.6 241 46.9
GSVIVG01003733001 Vitis vinifera HOM05D003067 ORTHO05D009378 6.1e-58 228.4 263 47.5
Cc06_g15260 Coffea canephora HOM05D003067 ORTHO05D009378 8.0e-58 228.0 250 46.4
Prupe.7G260000 Prunus persica HOM05D003067 ORTHO05D009378 1.4e-57 227.3 253 47.0
QL02p092630 Quercus lobata HOM05D003067 ORTHO05D009378 1.8e-57 226.9 265 44.5
Cfa020848 Carpinus fangiana HOM05D003067 ORTHO05D007251 3.9e-57 225.7 249 47.4
Oeu021253.1 Olea europaea HOM05D003067 ORTHO05D009378 3.9e-57 225.7 244 50.4
RcHm_v2.0_Chr2g0085991 Rosa chinensis HOM05D003067 ORTHO05D009378 1.5e-56 223.8 251 47.0
Atru.chr7.146 Acer truncatum HOM05D003067 ORTHO05D009378 2.2e-55 219.9 243 46.9
Thecc.09G033900 Theobroma cacao HOM05D003067 ORTHO05D009378 8.2e-55 218.0 260 44.2
CiPaw.16G115000 Carya illinoinensis HOM05D003067 ORTHO05D009378 7.0e-54 214.9 264 44.7
TWI34G0508 Tripterygium wilfordii HOM05D003067 ORTHO05D009378 1.6e-53 213.8 255 45.5
Haze_19237 Corylus avellana HOM05D003067 ORTHO05D009378 7.7e-53 211.5 285 41.8
Gohir.A07G026200 Gossypium hirsutum HOM05D003067 ORTHO05D009378 1.7e-52 210.3 260 42.7
CsaV3_2G003640 Cucumis sativus L. HOM05D003067 ORTHO05D009378 1.1e-51 207.6 249 44.2
Gorai.001G031300 Gossypium raimondii HOM05D003067 ORTHO05D009378 1.5e-51 207.2 261 42.1
MSTRG.6118 Avicennia marina HOM05D003067 ORTHO05D009378 7.2e-51 204.9 259 43.2
FAN28G0267 Fragaria x ananassa HOM05D003067 ORTHO05D009378 7.2e-51 204.9 249 43.0
Gohir.D07G030100 Gossypium hirsutum HOM05D003067 ORTHO05D009378 9.4e-51 204.5 260 41.9
FvH4_1g01190 Fragaria vesca HOM05D003067 ORTHO05D009378 1.6e-50 203.8 249 43.0
Potri.006G187500 Populus trichocarpa HOM05D003067 ORTHO05D009378 1.6e-50 203.8 257 42.4
Aqoxy7G03467 Aquilegia oxysepala HOM05D003067 ORTHO05D009378 3.6e-50 202.6 255 42.4
ClCG02G017140 Citrullus lanatus HOM05D003067 ORTHO05D009378 3.6e-50 202.6 272 41.9
Rhsim03G0256100 Rhododendron simsii HOM05D003779 ORTHO05D002678 1.8e-49 200.3 243 45.7
Eucgr.C00366 Eucalyptus grandis HOM05D003067 ORTHO05D009378 2.3e-49 199.9 255 42.4
MELO3C004431.2 Cucumis melo HOM05D003067 ORTHO05D009378 3.0e-49 199.5 278 42.1
CANSAT11G2322 Cannabis sativa HOM05D003067 ORTHO05D009378 4.0e-49 199.1 254 42.9
HanXRQChr05g0133261 Helianthus annuus HOM05D003067 ORTHO05D009378 8.8e-49 198.0 246 46.3
Medtr2g450220 Medicago truncatula HOM05D003067 ORTHO05D009378 1.2e-48 197.6 267 40.8
Nitab4.5_0001478g0160 Nicotiana tabacum HOM05D003067 ORTHO05D009378 1.5e-48 197.2 183 57.4
Nn2g12305 Nelumbo nucifera HOM05D003067 ORTHO05D009378 3.7e-47 192.6 257 41.6
CDE06G1077 Ceratophyllum demersum HOM05D003067 ORTHO05D009378 1.8e-46 190.3 265 38.5
Potri.018G110300 Populus trichocarpa HOM05D003067 ORTHO05D009378 4.1e-46 189.1 264 38.3
Migut.J01329 Erythranthe guttata HOM05D003067 ORTHO05D009378 5.0e-44 182.2 236 41.9
COL.COLO4_18774 Corchorus olitorius HOM05D003067 ORTHO05D009378 1.5e-43 180.6 239 40.6
SGA_v2.0_scaffold265G46124 Striga asiatica HOM05D003067 ORTHO05D009378 2.5e-43 179.9 254 38.2
HPP92_017493 Vanilla planifolia HOM05D003067 ORTHO05D009378 4.2e-43 179.1 244 41.0
PGR142G2789 Punica granatum HOM05D003067 ORTHO05D009378 2.1e-42 176.8 254 39.8
Duzib150G0133 Durio zibethinus HOM05D003067 ORTHO05D009378 2.7e-42 176.4 230 41.3
FAN23G1864 Fragaria x ananassa HOM05D003779 ORTHO05D002678 1.4e-41 174.1 192 45.3
ATR1153G020 Amborella trichopoda HOM05D003067 ORTHO05D009378 2.3e-41 173.3 256 38.7
Manes.14G112000 Manihot esculenta HOM05D003067 ORTHO05D009378 2.3e-41 173.3 225 39.1
MBI14_g05269_MAGBIO Magnolia biondii HOM05D003067 ORTHO05D009378 1.1e-38 164.5 240 40.8
Sabra18G0093300 Salix brachista HOM05D003067 ORTHO05D009378 1.8e-38 163.7 329 31.3
Os06g0183700 Oryza sativa ssp. japonica HOM05D003067 ORTHO05D009378 5.0e-36 155.6 245 34.3
Oeu043497.1 Olea europaea HOM05D003067 ORTHO05D009378 1.9e-35 153.7 241 39.8
Oeu043496.1 Olea europaea HOM05D003067 ORTHO05D009378 5.5e-35 152.1 241 39.0
Thhalv10025917m.g Eutrema salsugineum HOM05D003067 ORTHO05D009378 7.2e-35 151.8 248 35.5
SalBow1G0452 Salvia bowleyana HOM05D003067 ORTHO05D009378 9.5e-35 151.4 237 35.4
Lsat_1_v5_gn_8_59821 Lactuca sativa HOM05D003067 ORTHO05D009378 2.8e-34 149.8 240 40.8
AL7G21080 Arabidopsis lyrata HOM05D003067 ORTHO05D009378 3.6e-34 149.4 252 35.7
Carub.0007s0954 Capsella rubella HOM05D003067 ORTHO05D009378 3.6e-34 149.4 257 35.8
Sp7g28870 Schrenkiella parvula HOM05D003067 ORTHO05D009378 1.4e-33 147.5 244 34.4
DCAR_014819 Daucus carota HOM05D003067 ORTHO05D009378 1.8e-33 147.1 252 36.5
Nitab4.5_0008862g0010 Nicotiana tabacum HOM05D003067 ORTHO05D009378 3.0e-33 146.4 149 51.7
BcaNung03423 Brassica carinata HOM05D003067 ORTHO05D009378 5.2e-33 145.6 248 34.3
BcaC09g51887 Brassica carinata HOM05D003067 ORTHO05D009378 9.8e-32 141.4 253 34.4
A01p07190 Brassica napus HOM05D003067 ORTHO05D009378 1.3e-31 141.0 253 33.6
C01p07950 Brassica napus HOM05D003067 ORTHO05D009378 2.2e-31 140.2 253 33.6
BolC1t00782H Brassica oleracea HOM05D003067 ORTHO05D009378 2.2e-31 140.2 253 33.6
THA.LOC104803568 Tarenaya hassleriana HOM05D003067 ORTHO05D009378 2.8e-31 139.8 254 32.7
Zm00001eb374750 Zea mays HOM05D003067 ORTHO05D009378 1.4e-30 137.5 249 36.5
Lj6g0006451 Lotus japonicus HOM05D003067 ORTHO05D009378 3.2e-30 136.3 253 37.2
BraA01t00670Z Brassica rapa HOM05D003067 ORTHO05D009378 7.0e-30 135.2 253 32.8
vmacro06093 Vaccinium macrocarpon HOM05D003067 ORTHO05D009378 4.3e-27 125.9 226 38.1
MD02G1010100 Malus domestica HOM05D003067 ORTHO05D009378 1.2e-26 124.4 196 33.2
FAN19G0469 Fragaria x ananassa HOM05D003067 ORTHO05D009378 2.8e-26 123.2 131 48.1
AT4G30993 Arabidopsis thaliana HOM05D003067 ORTHO05D009378 3.4e-24 116.3 171 39.8
Cpa.g.sc46.125 Carica papaya HOM05D003067 ORTHO05D009378 1.3e-23 114.4 159 40.3
Nitab4.5_0000273g0210 Nicotiana tabacum HOM05D003067 ORTHO05D009378 4.6e-21 105.9 97 59.8
CARHR238890 Cardamine hirsuta HOM05D003067 ORTHO05D009378 3.9e-20 102.8 136 41.2
Glyma.15G205500 Glycine max HOM05D003067 ORTHO05D009378 1.9e-19 100.5 229 31.9
Nitab4.5_0002197g0030 Nicotiana tabacum HOM05D003067 ORTHO05D009378 8.0e-18 95.1 184 37.0
SGA_v2.0_scaffold214G42289 Striga asiatica HOM05D003067 ORTHO05D009378 8.0e-18 95.1 223 30.0
CSS0014498 Camellia sinensis var. sinensis HOM05D003067 ORTHO05D009378 1.5e-16 90.9 148 33.8
SGA_v2.0_scaffold113G31772 Striga asiatica HOM05D003067 ORTHO05D009378 7.5e-16 88.6 175 31.4
MD02G1010000 Malus domestica HOM05D003067 ORTHO05D009378 3.2e-14 83.2 66 59.1
GSVIVG01003739001 Vitis vinifera HOM05D003067 ORTHO05D009378 1.0e-12 78.2 62 61.3
Sopen11g015440 Solanum pennellii HOM05D000004 ORTHO05D000002 3.3e-11 73.2 49 79.6
Sopen03g003180 Solanum pennellii HOM05D004956 ORTHO05D006284 5.6e-11 72.4 35 97.1
Sopen11g017880 Solanum pennellii HOM05D004956 ORTHO05D006284 5.6e-11 72.4 35 97.1
Aa31LG2G19330 Aethionema arabicum HOM05D003067 ORTHO05D009378 3.2e-06 56.6 113 31.9
Mapoly0029s0107 Marchantia polymorpha HOM05D001297 ORTHO05D001135 3.2e-06 56.6 217 26.3


User provided reference genes

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