Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen12g004750 Solanum pennellii HOM05D008165 ORTHO05D007516 4.2e-42 175.3 135 100.0
Solyc12g009860.3 Solanum lycopersicum HOM05D008165 ORTHO05D007516 4.7e-41 171.8 135 97.8
PGSC0003DMG400007836 Solanum tuberosum HOM05D008165 ORTHO05D007516 5.6e-34 148.3 87 94.3
Nitab4.5_0008536g0060 Nicotiana tabacum HOM05D008165 ORTHO05D007516 5.2e-24 115.2 83 75.9
Nitab4.5_0007621g0020 Nicotiana tabacum HOM05D013625 ORTHO05D007516 6.2e-17 91.7 92 60.9
Rhsim03G0252900 Rhododendron simsii HOM05D008165 ORTHO05D007516 8.1e-17 91.3 86 55.8
CAN.G467.3 Capsicum annuum HOM05D013625 ORTHO05D007516 6.8e-16 88.2 104 53.8
Solyc07g007500.3 Solanum lycopersicum HOM05D013625 ORTHO05D007516 1.5e-15 87.0 105 53.3
Sopen07g003520 Solanum pennellii HOM05D013625 ORTHO05D007516 2.0e-15 86.7 105 52.4
Lj9A703T45 Lonicera japonica HOM05D008165 ORTHO05D007516 1.3e-14 84.0 73 60.3
Peaxi162Scf00088g00076 Petunia axillaris HOM05D013625 ORTHO05D007516 1.3e-14 84.0 84 57.1
vmacro23527 Vaccinium macrocarpon HOM05D008165 ORTHO05D007516 7.1e-13 78.2 87 50.6
Migut.J01244 Erythranthe guttata HOM05D008165 ORTHO05D007516 2.1e-12 76.6 88 52.3
Peaxi162Scf01694g00020 Petunia axillaris HOM05D013625 ORTHO05D007516 3.5e-12 75.9 69 68.1
GSVIVG01012854001 Vitis vinifera HOM05D008165 ORTHO05D007516 1.7e-11 73.6 135 54.1
FAN26G1249 Fragaria x ananassa HOM05D008165 ORTHO05D007516 5.1e-11 72.0 70 57.1
RcHm_v2.0_Chr2g0087101 Rosa chinensis HOM05D008165 ORTHO05D007516 6.6e-11 71.6 70 54.3
QL02p090702 Quercus lobata HOM05D008165 ORTHO05D007516 8.6e-11 71.2 86 51.2
FAN23G0205 Fragaria x ananassa HOM05D008165 ORTHO05D007516 3.3e-10 69.3 70 54.3
HanXRQChr06g0180411 Helianthus annuus HOM05D021640 ORTHO05D007516 3.3e-10 69.3 87 50.6
Gohir.D05G014200 Gossypium hirsutum HOM05D008165 ORTHO05D007516 9.6e-10 67.8 69 53.6
MD02G1018600 Malus domestica HOM05D008165 ORTHO05D007516 9.6e-10 67.8 70 51.4
Gohir.A05G013100 Gossypium hirsutum HOM05D008165 ORTHO05D007516 1.2e-09 67.4 67 53.7
Hma1.2p1_0343F.1_g130780 Hydrangea macrophylla HOM05D008165 ORTHO05D007516 1.6e-09 67.0 83 45.8
Duzib150G0960 Durio zibethinus HOM05D008165 ORTHO05D007516 2.8e-09 66.2 69 52.2
Duzib168G0348 Durio zibethinus HOM05D008165 ORTHO05D007516 2.8e-09 66.2 72 51.4
Ah.14g079050 Amaranthus hybridus HOM05D008165 ORTHO05D007516 4.7e-09 65.5 74 47.3
Duzib187G0069 Durio zibethinus HOM05D008165 ORTHO05D007516 4.7e-09 65.5 70 51.4
Thecc.09G137200 Theobroma cacao HOM05D008165 ORTHO05D007516 4.7e-09 65.5 70 52.9
ECA234G1017 Erigeron canadensis HOM05D021640 ORTHO05D007516 6.2e-09 65.1 63 57.1
Oeu058579.1 Olea europaea HOM05D008165 ORTHO05D007516 6.2e-09 65.1 88 48.9
MELO3C004479.2 Cucumis melo HOM05D008165 ORTHO05D007516 1.1e-08 64.3 67 52.2
Gorai.009G014200 Gossypium raimondii HOM05D008165 ORTHO05D007516 1.1e-08 64.3 68 51.5
Oeu055936.1 Olea europaea HOM05D008165 ORTHO05D007516 3.1e-08 62.8 84 45.2
FvH4_1g02080 Fragaria vesca HOM05D008165 ORTHO05D007516 4.0e-08 62.4 67 50.7
FAN19G0448 Fragaria x ananassa HOM05D008165 ORTHO05D007516 4.0e-08 62.4 67 50.7
TAR673G0004 Trochodendron aralioides HOM05D008165 ORTHO05D007516 4.0e-08 62.4 86 44.2
MD15G1162600 Malus domestica HOM05D008165 ORTHO05D007516 5.2e-08 62.0 76 47.4
Nn8g39643 Nelumbo nucifera HOM05D008165 ORTHO05D007516 5.2e-08 62.0 85 43.5
Manes.06G044400 Manihot esculenta HOM05D008165 ORTHO05D007516 6.8e-08 61.6 68 52.9
ClCG11G003470 Citrullus lanatus HOM05D008165 ORTHO05D007516 1.2e-07 60.8 71 49.3
ClCG11G003490 Citrullus lanatus HOM05D008165 ORTHO05D007516 2.0e-07 60.1 72 47.2
CsaV3_2G003340 Cucumis sativus L. HOM05D008165 ORTHO05D007516 2.0e-07 60.1 70 48.6
Dinv38142 Davidia involucrata HOM05D008165 ORTHO05D007516 2.0e-07 60.1 86 41.9
Manes.14G119100 Manihot esculenta HOM05D008165 ORTHO05D007516 2.0e-07 60.1 68 50.0
Nitab4.5_0000704g0140 Nicotiana tabacum HOM05D013625 ORTHO05D025947 2.0e-07 60.1 77 50.6
Hund21593 Selenicereus undatus HOM05D008165 ORTHO05D007516 2.0e-07 60.1 74 43.2
TAR383G0642 Trochodendron aralioides HOM05D008165 ORTHO05D007516 2.0e-07 60.1 84 44.0
THA.LOC104808953 Tarenaya hassleriana HOM05D010884 ORTHO05D012938 5.8e-07 58.5 67 49.3
CiPaw.07G225700 Carya illinoinensis HOM05D009923 ORTHO05D007516 9.9e-07 57.8 82 43.9
Cc06_g07690 Coffea canephora HOM05D008165 ORTHO05D007516 9.9e-07 57.8 86 46.5
TAR626G1841 Trochodendron aralioides HOM05D008165 ORTHO05D007516 9.9e-07 57.8 82 43.9
Atru.chr7.2009 Acer truncatum HOM05D008165 ORTHO05D007516 2.9e-06 56.2 68 44.1
Sed0004036 Sechium edule HOM05D008165 ORTHO05D007516 6.4e-06 55.1 68 44.1
TAR625G0094 Trochodendron aralioides HOM05D008165 ORTHO05D007516 6.4e-06 55.1 79 44.3
Prupe.7G252200 Prunus persica HOM05D008165 ORTHO05D007516 8.4e-06 54.7 69 43.5


User provided reference genes

Program Settings