Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen12g004740 Solanum pennellii HOM05D029996 ORTHO05D001393 1.3e-60 236.1 115 100.0
Solyc12g009850.1 Solanum lycopersicum HOM05D029996 ORTHO05D001393 8.1e-58 226.9 115 96.5
Peaxi162Scf01694g00003 Petunia axillaris HOM05D001603 ORTHO05D001393 6.7e-28 127.5 89 65.2
Nitab4.5_0008536g0050 Nicotiana tabacum HOM05D029996 ORTHO05D001393 2.4e-17 92.4 69 63.8
Nitab4.5_0002329g0080 Nicotiana tabacum HOM05D029996 ORTHO05D001393 1.5e-16 89.7 56 64.3
Atru.chr11.1201 Acer truncatum HOM05D001603 ORTHO05D001393 2.5e-11 72.4 84 44.0
Gorai.013G023700 Gossypium raimondii HOM05D001603 ORTHO05D001393 3.3e-11 72.0 82 39.0
Aqoxy1G00790 Aquilegia oxysepala HOM05D001603 ORTHO05D001393 5.7e-11 71.2 72 41.7
Gorai.013G023600 Gossypium raimondii HOM05D001603 ORTHO05D001393 7.4e-11 70.9 79 40.5
Aqoxy6G02757 Aquilegia oxysepala HOM05D001603 ORTHO05D001393 1.3e-10 70.1 83 37.3
Gorai.N025500 Gossypium raimondii HOM05D001603 ORTHO05D001393 1.3e-10 70.1 82 37.8
Gohir.A13G020450 Gossypium hirsutum HOM05D001603 ORTHO05D001393 2.2e-10 69.3 82 39.0
Gohir.D13G021050 Gossypium hirsutum HOM05D001603 ORTHO05D001393 4.8e-10 68.2 83 39.8
Atru.chr7.2004 Acer truncatum HOM05D001603 ORTHO05D001393 4.1e-09 65.1 80 37.5
TWI34G1934 Tripterygium wilfordii HOM05D001603 ORTHO05D001393 5.3e-09 64.7 76 44.7
BcaB01g04253 Brassica carinata HOM05D001603 ORTHO05D001393 6.9e-09 64.3 95 41.1
Atru.chr11.1514 Acer truncatum HOM05D001603 ORTHO05D001393 9.1e-09 63.9 93 32.3
CARHR157430 Cardamine hirsuta HOM05D001603 ORTHO05D001393 9.1e-09 63.9 108 33.3
Gohir.D08G101050 Gossypium hirsutum HOM05D001603 ORTHO05D001393 9.1e-09 63.9 117 33.3
Atru.chr7.1960 Acer truncatum HOM05D001603 ORTHO05D001393 1.5e-08 63.2 78 35.9
AT3G48675 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 1.5e-08 63.2 83 37.3
CiPaw.03G252200 Carya illinoinensis HOM05D001603 ORTHO05D001393 1.5e-08 63.2 91 39.6
Gorai.004G109100 Gossypium raimondii HOM05D001603 ORTHO05D001393 2.0e-08 62.8 116 31.9
Atru.chr7.1961 Acer truncatum HOM05D001603 ORTHO05D001393 2.6e-08 62.4 78 35.9
Gorai.004G109000 Gossypium raimondii HOM05D001603 ORTHO05D001393 3.4e-08 62.0 117 32.5
Gohir.D08G101100 Gossypium hirsutum HOM05D001603 ORTHO05D001393 7.7e-08 60.8 116 31.9
RcHm_v2.0_Chr1g0323971 Rosa chinensis HOM05D001603 ORTHO05D001393 1.0e-07 60.5 105 32.4
TWI63G0036 Tripterygium wilfordii HOM05D001603 ORTHO05D001393 1.0e-07 60.5 67 41.8
C04p54690 Brassica napus HOM05D001603 ORTHO05D001393 1.3e-07 60.1 83 37.3
FAN06G4924 Fragaria x ananassa HOM05D001603 ORTHO05D001393 1.7e-07 59.7 99 32.3
HanXRQChr10g0314171 Helianthus annuus HOM05D001603 ORTHO05D001393 2.2e-07 59.3 95 33.7
Duzib187G1233 Durio zibethinus HOM05D001603 ORTHO05D001393 2.9e-07 58.9 84 34.5
FAN22G0761 Fragaria x ananassa HOM05D001603 ORTHO05D001393 2.9e-07 58.9 101 31.7
MD02G1018800 Malus domestica HOM05D001603 ORTHO05D001393 3.8e-07 58.5 76 32.9
C04p54650 Brassica napus HOM05D001603 ORTHO05D001393 5.0e-07 58.2 65 40.0
FAN07G1734 Fragaria x ananassa HOM05D001603 ORTHO05D001393 5.0e-07 58.2 101 29.7
A03p15020 Brassica napus HOM05D001603 ORTHO05D001393 6.5e-07 57.8 84 39.3
C04p54600 Brassica napus HOM05D001603 ORTHO05D001393 6.5e-07 57.8 83 36.1
BraA03t10796Z Brassica rapa HOM05D001603 ORTHO05D001393 6.5e-07 57.8 84 39.3
Duzib187G1932 Durio zibethinus HOM05D001603 ORTHO05D001393 6.5e-07 57.8 85 35.3
FAN17G1385 Fragaria x ananassa HOM05D001603 ORTHO05D001393 6.5e-07 57.8 101 30.7
BcaC02g08400 Brassica carinata HOM05D001603 ORTHO05D001393 1.1e-06 57.0 83 36.1
BcaC02g08403 Brassica carinata HOM05D001603 ORTHO05D001393 1.1e-06 57.0 83 36.1
BcaC02g08405 Brassica carinata HOM05D001603 ORTHO05D001393 1.1e-06 57.0 83 36.1
BcaC02g08407 Brassica carinata HOM05D001603 ORTHO05D001393 1.1e-06 57.0 83 36.1
A03p28440 Brassica napus HOM05D001603 ORTHO05D001393 1.1e-06 57.0 82 31.7
C03p34370 Brassica napus HOM05D001603 ORTHO05D001393 1.1e-06 57.0 82 31.7
BolC3t15747H Brassica oleracea HOM05D001603 ORTHO05D001393 1.1e-06 57.0 82 31.7
BolC4t27006H Brassica oleracea HOM05D001603 ORTHO05D001393 1.1e-06 57.0 83 36.1
BolC4t27013H Brassica oleracea HOM05D001603 ORTHO05D001393 1.1e-06 57.0 83 36.1
BraA03t12049Z Brassica rapa HOM05D001603 ORTHO05D001393 1.1e-06 57.0 82 31.7
Lalb_Chr08g0238711 Lupinus albus HOM05D001595 ORTHO05D001573 1.1e-06 57.0 115 34.8
BcaC02g08401 Brassica carinata HOM05D001603 ORTHO05D001393 1.4e-06 56.6 83 36.1
BolC4t27011H Brassica oleracea HOM05D001603 ORTHO05D001393 1.4e-06 56.6 83 36.1
CSS0032619 Camellia sinensis var. sinensis HOM05D001603 ORTHO05D001393 1.4e-06 56.6 69 34.8
C04p54670 Brassica napus HOM05D001603 ORTHO05D001393 1.9e-06 56.2 65 40.0
BolC3t14164H Brassica oleracea HOM05D001603 ORTHO05D001393 1.9e-06 56.2 84 39.3
BolC4t27003H Brassica oleracea HOM05D001603 ORTHO05D001393 1.9e-06 56.2 75 44.0
AL5G28100 Arabidopsis lyrata HOM05D001603 ORTHO05D001393 2.5e-06 55.8 83 33.7
arahy.Tifrunner.gnm1.ann1.D1YDE1 Arachis hypogaea HOM05D001595 ORTHO05D001573 3.2e-06 55.5 79 38.0
C03p17510 Brassica napus HOM05D001603 ORTHO05D001393 3.2e-06 55.5 84 39.3
FvH4_1g09740 Fragaria vesca HOM05D001603 ORTHO05D001393 4.2e-06 55.1 107 31.8
TWI60G0213 Tripterygium wilfordii HOM05D001595 ORTHO05D001573 4.2e-06 55.1 94 36.2
RcHm_v2.0_Chr2g0149601 Rosa chinensis HOM05D001603 ORTHO05D001393 5.5e-06 54.7 71 33.8
TWI34G1802 Tripterygium wilfordii HOM05D001603 ORTHO05D001393 5.5e-06 54.7 62 40.3
AT5G54062 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 7.2e-06 54.3 87 37.9
FAN05G1005 Fragaria x ananassa HOM05D001603 ORTHO05D001393 7.2e-06 54.3 78 35.9
Lj7A438G59 Lonicera japonica HOM05D001603 ORTHO05D001393 7.2e-06 54.3 92 29.3


User provided reference genes

Program Settings