Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen12g004340 Solanum pennellii HOM05D063488 ORTHO05D000014 2.0e-68 262.3 134 100.0
Sopen02g012100 Solanum pennellii HOM05D000023 ORTHO05D000014 1.9e-42 176.0 121 78.5
Sopen02g031420 Solanum pennellii HOM05D063488 ORTHO05D000014 9.2e-29 130.6 78 85.9
Sopen07g011030 Solanum pennellii HOM05D000004 ORTHO05D000002 1.1e-24 117.1 76 80.3
Sopen04g027700 Solanum pennellii HOM05D000023 ORTHO05D000014 1.4e-16 90.1 115 42.6
Sopen04g029610 Solanum pennellii HOM05D000023 ORTHO05D000014 1.2e-15 87.0 132 40.2
Sopen01g010490 Solanum pennellii HOM05D000023 ORTHO05D000014 4.9e-14 81.6 90 45.6
Sopen01g050040 Solanum pennellii HOM05D000023 ORTHO05D000014 4.9e-14 81.6 90 45.6
Sopen09g012170 Solanum pennellii HOM05D000023 ORTHO05D000014 4.9e-14 81.6 90 45.6
Sopen10g005310 Solanum pennellii HOM05D000023 ORTHO05D000014 4.9e-14 81.6 90 45.6
Sopen10g007400 Solanum pennellii HOM05D000023 ORTHO05D000014 4.9e-14 81.6 90 45.6
Sopen11g018050 Solanum pennellii HOM05D000023 ORTHO05D000014 4.9e-14 81.6 90 45.6
Sopen02g003630 Solanum pennellii HOM05D000023 ORTHO05D000014 1.4e-13 80.1 89 44.9
Sopen02g012930 Solanum pennellii HOM05D000023 ORTHO05D000014 1.4e-13 80.1 76 48.7
Sopen11g015710 Solanum pennellii HOM05D000023 ORTHO05D000014 1.4e-13 80.1 89 44.9
Sopen11g024690 Solanum pennellii HOM05D000023 ORTHO05D000014 7.1e-13 77.8 85 44.7
Sopen10g023190 Solanum pennellii HOM05D000002 ORTHO05D000001 6.0e-12 74.7 71 50.7
Sopen11g022230 Solanum pennellii HOM05D000023 ORTHO05D000014 7.8e-12 74.3 88 43.2
MSTRG.16385 Avicennia marina HOM05D000023 ORTHO05D000014 5.1e-11 71.6 121 38.0
MSTRG.22845 Avicennia marina HOM05D000023 ORTHO05D000014 5.1e-11 71.6 121 38.0
MSTRG.13281 Avicennia marina HOM05D000023 ORTHO05D000014 1.5e-10 70.1 115 43.5
CSS0009102 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 4.3e-10 68.6 128 38.3
SHI10580 Sapria himalayana HOM05D002969 ORTHO05D000023 5.6e-10 68.2 68 48.5
GSVIVG01028492001 Vitis vinifera HOM05D000023 ORTHO05D012697 5.6e-10 68.2 114 38.6
HanXRQChr13g0403681 Helianthus annuus HOM05D000023 ORTHO05D000014 7.3e-10 67.8 145 35.2
GSVIVG01012413001 Vitis vinifera HOM05D000023 ORTHO05D000014 1.2e-09 67.0 116 38.8
SHI38292 Sapria himalayana HOM05D000023 ORTHO05D000014 2.1e-09 66.2 68 47.1
SHI23383 Sapria himalayana HOM05D000023 ORTHO05D000014 2.8e-09 65.9 73 45.2
QL02p096245 Quercus lobata HOM05D000023 ORTHO05D000014 4.7e-09 65.1 77 44.2
CAN.G999.36 Capsicum annuum HOM05D000023 ORTHO05D000014 8.1e-09 64.3 124 34.7
SHI22268 Sapria himalayana HOM05D000023 ORTHO05D000014 8.1e-09 64.3 68 47.1
SGA_v2.0_scaffold327G48774 Striga asiatica HOM05D000023 ORTHO05D000014 8.1e-09 64.3 101 42.6
CSS0034212 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.1e-08 63.9 131 35.9
SHI12442 Sapria himalayana HOM05D000023 ORTHO05D000014 1.1e-08 63.9 68 47.1
SHI04408 Sapria himalayana HOM05D000023 ORTHO05D000014 1.4e-08 63.5 62 48.4
SHI06614 Sapria himalayana HOM05D000023 ORTHO05D000014 1.4e-08 63.5 62 50.0
SHI16915 Sapria himalayana HOM05D000023 ORTHO05D000014 1.8e-08 63.2 68 45.6
QL01p001421 Quercus lobata HOM05D000023 ORTHO05D000014 2.4e-08 62.8 77 42.9
QL02p069511 Quercus lobata HOM05D000023 ORTHO05D000014 2.4e-08 62.8 107 35.5
QL10p011117 Quercus lobata HOM05D000023 ORTHO05D000014 2.4e-08 62.8 77 42.9
Hma1.2p1_0153F.1_g067910 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 3.1e-08 62.4 76 44.7
SHI06283 Sapria himalayana HOM05D000023 ORTHO05D000014 3.1e-08 62.4 61 49.2
SHI16380 Sapria himalayana HOM05D000023 ORTHO05D000014 3.1e-08 62.4 68 45.6
CSS0009823 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 5.2e-08 61.6 134 35.1
SHI18308 Sapria himalayana HOM05D000023 ORTHO05D000014 5.2e-08 61.6 68 45.6
SHI18325 Sapria himalayana HOM05D000023 ORTHO05D000014 5.2e-08 61.6 133 31.6
CSS0017113 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 6.8e-08 61.2 123 38.2
SHI17472 Sapria himalayana HOM05D000023 ORTHO05D000014 6.8e-08 61.2 122 33.6
SHI33503 Sapria himalayana HOM05D000023 ORTHO05D000014 6.8e-08 61.2 68 44.1
SHI11144 Sapria himalayana HOM05D000023 ORTHO05D000014 1.2e-07 60.5 62 46.8
Hund24277 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.2e-07 60.5 132 34.8
AL2G12490 Arabidopsis lyrata HOM05D000023 ORTHO05D000014 1.5e-07 60.1 121 33.9
SHI20754 Sapria himalayana HOM05D000030 ORTHO05D000009 1.5e-07 60.1 62 46.8
C09p51190 Brassica napus HOM05D000023 ORTHO05D000014 2.0e-07 59.7 112 39.3
QL04p080373 Quercus lobata HOM05D000023 ORTHO05D000014 2.0e-07 59.7 77 41.6
SHI03185 Sapria himalayana HOM05D000023 ORTHO05D000014 2.0e-07 59.7 68 44.1
SHI08066 Sapria himalayana HOM05D005592 ORTHO05D006067 2.0e-07 59.7 68 44.1
SHI11426 Sapria himalayana HOM05D000023 ORTHO05D000014 2.0e-07 59.7 68 45.6
SHI26408 Sapria himalayana HOM05D000023 ORTHO05D000014 2.0e-07 59.7 133 33.1
SHI31428 Sapria himalayana HOM05D000023 ORTHO05D000014 2.0e-07 59.7 68 45.6
SHI33358 Sapria himalayana HOM05D000023 ORTHO05D000014 2.0e-07 59.7 68 45.6
Hund12336 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.0e-07 59.7 111 36.9
BraA09t39253Z Brassica rapa HOM05D000023 ORTHO05D000014 2.6e-07 59.3 117 37.6
Manes.16G093350 Manihot esculenta HOM05D000023 ORTHO05D000014 2.6e-07 59.3 92 38.0
Nn8g40496 Nelumbo nucifera HOM05D017141 ORTHO05D000014 2.6e-07 59.3 47 59.6
SHI24935 Sapria himalayana HOM05D000023 ORTHO05D000014 2.6e-07 59.3 68 44.1
SHI00601 Sapria himalayana HOM05D000023 ORTHO05D000014 3.4e-07 58.9 68 44.1
SHI16260 Sapria himalayana HOM05D000023 ORTHO05D000014 3.4e-07 58.9 68 42.6
SHI22229 Sapria himalayana HOM05D000023 ORTHO05D000014 3.4e-07 58.9 58 48.3
SHI25494 Sapria himalayana HOM05D000023 ORTHO05D000014 3.4e-07 58.9 58 48.3
SHI29208 Sapria himalayana HOM05D004307 ORTHO05D005068 3.4e-07 58.9 64 45.3
SHI09634 Sapria himalayana HOM05D000023 ORTHO05D000014 4.4e-07 58.5 58 48.3
SHI24305 Sapria himalayana HOM05D000023 ORTHO05D000014 4.4e-07 58.5 58 46.6
SHI25897 Sapria himalayana HOM05D000023 ORTHO05D000014 4.4e-07 58.5 68 44.1
SHI03590 Sapria himalayana HOM05D000023 ORTHO05D000014 5.8e-07 58.2 68 42.6
SHI11824 Sapria himalayana HOM05D000023 ORTHO05D000014 5.8e-07 58.2 68 44.1
SHI15385 Sapria himalayana HOM05D000023 ORTHO05D000014 5.8e-07 58.2 68 42.6
SHI20062 Sapria himalayana HOM05D000023 ORTHO05D000014 5.8e-07 58.2 68 42.6
SHI35703 Sapria himalayana HOM05D000023 ORTHO05D000014 5.8e-07 58.2 68 45.6
SGA_v2.0_scaffold33G13370 Striga asiatica HOM05D000023 ORTHO05D000014 5.8e-07 58.2 145 33.1
SHI03880 Sapria himalayana HOM05D000023 ORTHO05D000014 7.6e-07 57.8 68 41.2
SHI42686 Sapria himalayana HOM05D000023 ORTHO05D000014 7.6e-07 57.8 68 44.1
Hund12079 Selenicereus undatus HOM05D000023 ORTHO05D000014 7.6e-07 57.8 89 37.1
CSS0028127 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 9.9e-07 57.4 112 38.4
CSS0029366 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 9.9e-07 57.4 112 38.4
SHI05693 Sapria himalayana HOM05D000023 ORTHO05D000014 9.9e-07 57.4 68 42.6
Hund05590 Selenicereus undatus HOM05D000023 ORTHO05D000014 9.9e-07 57.4 89 37.1
Hund11626 Selenicereus undatus HOM05D000023 ORTHO05D000014 9.9e-07 57.4 89 37.1
Hund14805 Selenicereus undatus HOM05D000023 ORTHO05D000014 9.9e-07 57.4 89 37.1
Hund16692 Selenicereus undatus HOM05D000023 ORTHO05D005162 9.9e-07 57.4 89 37.1
Hund22984 Selenicereus undatus HOM05D000023 ORTHO05D000014 9.9e-07 57.4 89 37.1
Hund25514 Selenicereus undatus HOM05D000023 ORTHO05D000014 9.9e-07 57.4 89 37.1
CSS0011756 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.3e-06 57.0 112 37.5
SHI03592 Sapria himalayana HOM05D000023 ORTHO05D000014 1.3e-06 57.0 68 41.2
C02p55960 Brassica napus HOM05D000023 ORTHO05D000014 1.7e-06 56.6 115 36.5
SHI01315 Sapria himalayana HOM05D000023 ORTHO05D000014 1.7e-06 56.6 58 46.6
SHI09449 Sapria himalayana HOM05D000023 ORTHO05D000014 1.7e-06 56.6 68 44.1
Hund04194 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.7e-06 56.6 89 37.1
Hund10515 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.7e-06 56.6 73 41.1
Hma1.2p1_0696F.1_g204565 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 2.2e-06 56.2 62 46.8
Hma1.2p1_0696F.1_g204590 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 2.2e-06 56.2 62 46.8
Hma1.2p1_0696F.1_g204597 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 2.2e-06 56.2 76 40.8
Lj4g0000084 Lotus japonicus HOM05D000023 ORTHO05D000014 2.2e-06 56.2 92 33.7
Hund23957 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.2e-06 56.2 89 38.2
Hund30017 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.2e-06 56.2 89 36.0
CSS0008330 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 2.9e-06 55.8 117 36.8
SHI07432 Sapria himalayana HOM05D000023 ORTHO05D000014 2.9e-06 55.8 65 44.6
SHI12543 Sapria himalayana HOM05D000023 ORTHO05D000014 2.9e-06 55.8 68 45.6
SHI17216 Sapria himalayana HOM05D000023 ORTHO05D000014 2.9e-06 55.8 68 42.6
Hund19619 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.9e-06 55.8 89 36.0
Hund26626 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.9e-06 55.8 89 37.1
SGA_v2.0_scaffold17G08089 Striga asiatica HOM05D000023 ORTHO05D000014 2.9e-06 55.8 101 40.6
AT5G33406 Arabidopsis thaliana HOM05D000023 ORTHO05D000014 3.8e-06 55.5 142 28.2
CSS0002633 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 3.8e-06 55.5 112 36.6
CSS0016346 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 3.8e-06 55.5 112 36.6
SHI07350 Sapria himalayana HOM05D000023 ORTHO05D000014 3.8e-06 55.5 68 41.2
SHI10060 Sapria himalayana HOM05D000684 ORTHO05D000688 3.8e-06 55.5 53 49.1
SHI12321 Sapria himalayana HOM05D000023 ORTHO05D000014 3.8e-06 55.5 61 45.9
Hund11026 Selenicereus undatus HOM05D000023 ORTHO05D000014 3.8e-06 55.5 65 44.6
C02p30840 Brassica napus HOM05D000023 ORTHO05D000014 4.9e-06 55.1 119 35.3
Hma1.2p1_0696F.1_g204562 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 4.9e-06 55.1 76 39.5
Hma1.2p1_0696F.1_g204576 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 4.9e-06 55.1 76 39.5
Hma1.2p1_0696F.1_g204596 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 4.9e-06 55.1 76 39.5
SHI03483 Sapria himalayana HOM05D003699 ORTHO05D004474 4.9e-06 55.1 68 42.6
SHI25353 Sapria himalayana HOM05D000023 ORTHO05D000014 4.9e-06 55.1 68 41.2
Hund10422 Selenicereus undatus HOM05D000023 ORTHO05D000014 4.9e-06 55.1 73 39.7
Hund10580 Selenicereus undatus HOM05D000023 ORTHO05D000014 4.9e-06 55.1 73 39.7
Hund13073 Selenicereus undatus HOM05D000023 ORTHO05D000014 4.9e-06 55.1 89 36.0
Hund15523 Selenicereus undatus HOM05D000023 ORTHO05D000014 4.9e-06 55.1 73 39.7
Hund22426 Selenicereus undatus HOM05D000023 ORTHO05D000014 4.9e-06 55.1 73 39.7
Hund23411 Selenicereus undatus HOM05D000023 ORTHO05D000014 4.9e-06 55.1 89 36.0
Hund24276 Selenicereus undatus HOM05D000023 ORTHO05D000014 4.9e-06 55.1 89 36.0
PGSC0003DMG400030247 Solanum tuberosum HOM05D000023 ORTHO05D000014 4.9e-06 55.1 105 36.2
Hma1.2p1_0696F.1_g204543 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 6.4e-06 54.7 76 39.5
Hma1.2p1_0696F.1_g204560 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 6.4e-06 54.7 70 41.4
Hma1.2p1_0696F.1_g204564 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 6.4e-06 54.7 76 39.5
Hma1.2p1_0696F.1_g204567 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 6.4e-06 54.7 76 39.5
Hma1.2p1_0696F.1_g204573 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 6.4e-06 54.7 70 41.4
Hma1.2p1_0696F.1_g204580 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 6.4e-06 54.7 76 39.5
Hma1.2p1_0696F.1_g204593 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 6.4e-06 54.7 76 39.5
Hma1.2p1_0696F.1_g204595 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 6.4e-06 54.7 70 41.4
Hma1.2p1_2277F.1_g318660 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 6.4e-06 54.7 60 46.7
SHI12243 Sapria himalayana HOM05D000023 ORTHO05D000014 6.4e-06 54.7 68 41.2
SHI21507 Sapria himalayana HOM05D000023 ORTHO05D000014 6.4e-06 54.7 58 44.8
SHI33616 Sapria himalayana HOM05D000023 ORTHO05D000014 6.4e-06 54.7 62 45.2
SHI39264 Sapria himalayana HOM05D000023 ORTHO05D000014 6.4e-06 54.7 68 41.2
Hund00488 Selenicereus undatus HOM05D000023 ORTHO05D000014 6.4e-06 54.7 88 36.4
BolC5t30750H Brassica oleracea HOM05D000023 ORTHO05D000014 8.4e-06 54.3 123 33.3
Hma1.2p1_0696F.1_g204563 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 8.4e-06 54.3 70 41.4
Hma1.2p1_0696F.1_g204566 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 8.4e-06 54.3 70 41.4
Hma1.2p1_0696F.1_g204579 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 8.4e-06 54.3 70 41.4
Hma1.2p1_0696F.1_g204592 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 8.4e-06 54.3 70 41.4
Lj1g0014944 Lotus japonicus HOM05D000023 ORTHO05D000014 8.4e-06 54.3 83 38.6
SHI06114 Sapria himalayana HOM05D000023 ORTHO05D000014 8.4e-06 54.3 68 41.2
SHI06974 Sapria himalayana HOM05D000023 ORTHO05D000014 8.4e-06 54.3 99 33.3
SHI08553 Sapria himalayana HOM05D002880 ORTHO05D003450 8.4e-06 54.3 65 44.6
Hund24139 Selenicereus undatus HOM05D000023 ORTHO05D000014 8.4e-06 54.3 89 36.0
Hund24143 Selenicereus undatus HOM05D000023 ORTHO05D000014 8.4e-06 54.3 122 33.6


User provided reference genes

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