Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen12g003440 Solanum pennellii HOM05D003954 ORTHO05D004627 7.8e-310 1066.2 520 100.0
Solyc12g008490.2 Solanum lycopersicum HOM05D003954 ORTHO05D004627 6.6e-309 1063.1 520 99.6
PGSC0003DMG400000296 Solanum tuberosum HOM05D003954 ORTHO05D004627 7.6e-305 1049.7 520 97.9
CAN.G1241.30 Capsicum annuum HOM05D003954 ORTHO05D004627 8.1e-291 1003.0 521 93.5
Peaxi162Scf00665g00340 Petunia axillaris HOM05D003954 ORTHO05D004627 3.2e-279 964.5 520 89.4
Nitab4.5_0005668g0030 Nicotiana tabacum HOM05D003954 ORTHO05D004627 3.0e-277 958.0 520 89.2
Nitab4.5_0000566g0060 Nicotiana tabacum HOM05D003954 ORTHO05D004627 1.9e-276 955.3 517 89.9
Cfa003181 Carpinus fangiana HOM05D003954 ORTHO05D004627 5.5e-255 884.0 520 81.2
CiPaw.04G158000 Carya illinoinensis HOM05D003954 ORTHO05D004627 3.9e-253 877.9 520 81.2
CiPaw.03G225300 Carya illinoinensis HOM05D003954 ORTHO05D004627 1.3e-251 872.8 520 79.8
Eucgr.C03729 Eucalyptus grandis HOM05D003954 ORTHO05D004627 2.2e-251 872.1 520 80.6
SGA_v2.0_scaffold62G21557 Striga asiatica HOM05D003954 ORTHO05D004627 2.2e-251 872.1 520 80.0
Cpa.g.sc40.95 Carica papaya HOM05D003954 ORTHO05D004627 9.1e-250 866.7 520 80.4
RcHm_v2.0_Chr2g0091861 Rosa chinensis HOM05D003954 ORTHO05D004627 1.2e-249 866.3 516 81.0
Oeu064178.1 Olea europaea HOM05D003954 ORTHO05D004627 1.0e-248 863.2 520 80.6
Cc06_g10470 Coffea canephora HOM05D003954 ORTHO05D004627 2.2e-248 862.1 517 80.7
CSS0001350 Camellia sinensis var. sinensis HOM05D003954 ORTHO05D004627 3.8e-248 861.3 521 80.4
QL02p041611 Quercus lobata HOM05D003954 ORTHO05D004627 5.0e-248 860.9 519 79.6
Duzib168G1367 Durio zibethinus HOM05D003954 ORTHO05D004627 4.2e-247 857.8 520 79.0
TWI34G0439 Tripterygium wilfordii HOM05D003954 ORTHO05D004627 7.2e-247 857.1 520 79.2
vmacro06252 Vaccinium macrocarpon HOM05D003954 ORTHO05D004627 7.2e-247 857.1 520 79.4
Thecc.09G100700 Theobroma cacao HOM05D003954 ORTHO05D004627 9.4e-247 856.7 520 78.8
Actinidia09446 Actinidia chinensis HOM05D003954 ORTHO05D004627 1.6e-246 855.9 518 79.9
Ciclev10008006m.g Citrus clementina HOM05D003954 ORTHO05D004627 2.7e-246 855.1 520 79.2
Hma1.2p1_0571F.1_g180650 Hydrangea macrophylla HOM05D003954 ORTHO05D004627 4.7e-246 854.4 520 79.6
Hund09103 Selenicereus undatus HOM05D003954 ORTHO05D004627 6.1e-246 854.0 520 77.7
EL10Ac8g18378 Beta vulgaris HOM05D003954 ORTHO05D004627 1.8e-245 852.4 520 77.7
MD15G1196500 Malus domestica HOM05D003954 ORTHO05D004627 4.0e-245 851.3 521 78.5
Manes.03G027300 Manihot esculenta HOM05D003954 ORTHO05D004627 4.0e-245 851.3 518 79.2
FAN28G0221 Fragaria x ananassa HOM05D003954 ORTHO05D004627 5.2e-245 850.9 523 78.6
MSTRG.19554 Avicennia marina HOM05D003954 ORTHO05D004627 1.5e-244 849.4 517 79.9
Phvul.002G308700 Phaseolus vulgaris HOM05D003954 ORTHO05D004627 1.5e-244 849.4 518 79.9
VMungo0251G2014 Vigna mungo HOM05D003954 ORTHO05D004627 1.5e-244 849.4 518 79.7
MD02G1065600 Malus domestica HOM05D003954 ORTHO05D004627 2.6e-244 848.6 520 78.5
Migut.K00540 Erythranthe guttata HOM05D003954 ORTHO05D004627 3.4e-244 848.2 520 78.1
Manes.16G108600 Manihot esculenta HOM05D003954 ORTHO05D004627 3.4e-244 848.2 511 80.2
FAN19G1313 Fragaria x ananassa HOM05D003954 ORTHO05D004627 7.5e-244 847.0 522 78.4
FAN26G2983 Fragaria x ananassa HOM05D003954 ORTHO05D004627 9.7e-244 846.7 523 78.2
Gohir.A06G067200 Gossypium hirsutum HOM05D003954 ORTHO05D004627 1.7e-243 845.9 517 78.1
Gohir.D06G065800 Gossypium hirsutum HOM05D003954 ORTHO05D004627 1.7e-243 845.9 517 78.1
Actinidia39784 Actinidia chinensis HOM05D003954 ORTHO05D004627 2.2e-243 845.5 518 79.5
GSVIVG01015303001 Vitis vinifera HOM05D003954 ORTHO05D004627 2.8e-243 845.1 518 78.4
Thhalv10001962m.g Eutrema salsugineum HOM05D003954 ORTHO05D004627 6.3e-243 844.0 521 77.7
FAN26G2948 Fragaria x ananassa HOM05D003954 ORTHO05D004627 8.3e-243 843.6 523 77.8
Migut.J01101 Erythranthe guttata HOM05D003954 ORTHO05D004627 1.1e-242 843.2 520 79.2
Glyma.08G033600 Glycine max HOM05D003954 ORTHO05D004627 1.1e-242 843.2 518 79.5
THA.LOC104814571 Tarenaya hassleriana HOM05D003954 ORTHO05D004627 1.1e-242 843.2 520 78.3
Actinidia07454 Actinidia chinensis HOM05D003954 ORTHO05D004627 2.4e-242 842.0 554 74.9
Sp3g33220 Schrenkiella parvula HOM05D003954 ORTHO05D004627 3.1e-242 841.6 521 77.5
Lj4g0018527 Lotus japonicus HOM05D003954 ORTHO05D004627 7.0e-242 840.5 518 78.8
Potri.006G164864 Populus trichocarpa HOM05D003954 ORTHO05D004627 4.5e-241 837.8 509 78.8
AT2G19880 Arabidopsis thaliana HOM05D003954 ORTHO05D004627 5.9e-241 837.4 521 77.4
Carub.0003s3415 Capsella rubella HOM05D003954 ORTHO05D004627 5.9e-241 837.4 520 77.1
Glyma.05G226800 Glycine max HOM05D003954 ORTHO05D004627 7.7e-241 837.0 519 78.8
SGA_v2.0_scaffold19G08753 Striga asiatica HOM05D003954 ORTHO05D004627 7.7e-241 837.0 530 76.6
CARHR110320 Cardamine hirsuta HOM05D003954 ORTHO05D004627 1.0e-240 836.6 521 76.6
Sc08g0008010 Simmondsia chinensis HOM05D003954 ORTHO05D004627 1.3e-240 836.3 520 76.3
AL3G48340 Arabidopsis lyrata HOM05D003954 ORTHO05D004627 3.8e-240 834.7 521 77.0
Ca_17364_v3 Cicer arietinum L. HOM05D003954 ORTHO05D004627 1.1e-239 833.2 516 77.7
ECA240G1631 Erigeron canadensis HOM05D003954 ORTHO05D004627 1.5e-239 832.8 517 76.6
THA.LOC104804008 Tarenaya hassleriana HOM05D003954 ORTHO05D004627 2.5e-239 832.0 520 76.3
Sabra18G0076000 Salix brachista HOM05D003954 ORTHO05D004627 7.2e-239 830.5 511 78.1
Potri.018G087700 Populus trichocarpa HOM05D003954 ORTHO05D004627 9.4e-239 830.1 516 77.1
Gorai.010G077100 Gossypium raimondii HOM05D003954 ORTHO05D004627 1.2e-238 829.7 542 74.2
Aa31LG8G16830 Aethionema arabicum HOM05D003954 ORTHO05D004627 1.6e-238 829.3 521 76.2
BcaC04g22815 Brassica carinata HOM05D003954 ORTHO05D004627 3.6e-238 828.2 518 76.3
C09p15000 Brassica napus HOM05D003954 ORTHO05D004627 3.6e-238 828.2 518 76.3
Medtr8g102500 Medicago truncatula HOM05D003954 ORTHO05D004627 3.6e-238 828.2 518 76.6
BraA07t27878Z Brassica rapa HOM05D003954 ORTHO05D004627 1.0e-237 826.6 519 75.7
HanXRQChr11g0321631 Helianthus annuus HOM05D003954 ORTHO05D004627 1.0e-237 826.6 520 76.9
BcaC06g36652 Brassica carinata HOM05D003954 ORTHO05D004627 1.8e-237 825.9 519 75.7
A07p00800 Brassica napus HOM05D003954 ORTHO05D004627 1.8e-237 825.9 519 75.7
BolC7t40584H Brassica oleracea HOM05D003954 ORTHO05D004627 1.8e-237 825.9 519 75.7
BolC9t54402H Brassica oleracea HOM05D003954 ORTHO05D004627 1.8e-237 825.9 519 76.3
BcaB03g16776 Brassica carinata HOM05D003954 ORTHO05D004627 2.3e-237 825.5 519 75.9
HanXRQChr09g0238881 Helianthus annuus HOM05D003954 ORTHO05D004627 3.0e-237 825.1 517 76.8
CsaV3_1G039780 Cucumis sativus L. HOM05D003954 ORTHO05D004627 4.0e-237 824.7 522 75.5
TAR624G0841 Trochodendron aralioides HOM05D003954 ORTHO05D004627 5.2e-237 824.3 518 75.7
CANSAT56G2004 Cannabis sativa HOM05D003954 ORTHO05D004627 1.2e-236 823.2 544 74.1
A09p59090 Brassica napus HOM05D003954 ORTHO05D004627 1.5e-236 822.8 521 74.5
BcaB08g34891 Brassica carinata HOM05D003954 ORTHO05D004627 2.6e-236 822.0 521 74.9
C08p42370 Brassica napus HOM05D003954 ORTHO05D004627 2.6e-236 822.0 521 74.7
BolC8t51799H Brassica oleracea HOM05D003954 ORTHO05D004627 2.6e-236 822.0 521 74.7
BraA09t41292Z Brassica rapa HOM05D003954 ORTHO05D004627 7.5e-236 820.5 521 74.1
BcaC07g41232 Brassica carinata HOM05D003954 ORTHO05D004627 1.7e-235 819.3 521 74.5
Sed0027745 Sechium edule HOM05D003954 ORTHO05D004627 3.7e-235 818.1 519 75.5
BraA09t36909Z Brassica rapa HOM05D003954 ORTHO05D004627 1.4e-234 816.2 522 75.5
Gohir.A05G025900 Gossypium hirsutum HOM05D003954 ORTHO05D004627 1.2e-233 813.1 520 75.2
Gorai.009G027500 Gossypium raimondii HOM05D003954 ORTHO05D004627 1.2e-233 813.1 520 75.2
Lalb_Chr09g0331531 Lupinus albus HOM05D003954 ORTHO05D004627 4.5e-233 811.2 521 75.0
MBI01_g10128_MAGBIO Magnolia biondii HOM05D003954 ORTHO05D004627 1.3e-232 809.7 526 73.2
Lalb_Chr05g0223231 Lupinus albus HOM05D003954 ORTHO05D004627 8.6e-232 807.0 521 74.1
Gohir.D05G027400 Gossypium hirsutum HOM05D003954 ORTHO05D004627 1.1e-231 806.6 530 73.8
PGR102G1739 Punica granatum HOM05D003954 ORTHO05D004627 7.2e-231 803.9 520 75.6
Dinv36687 Davidia involucrata HOM05D003954 ORTHO05D004627 1.6e-230 802.7 466 82.6
Rhsim05G0040200 Rhododendron simsii HOM05D003954 ORTHO05D004627 8.0e-230 800.4 518 76.1
Aqoxy7G01403 Aquilegia oxysepala HOM05D003954 ORTHO05D004627 5.2e-229 797.7 513 74.3
FAN23G0884 Fragaria x ananassa HOM05D003954 ORTHO05D004627 8.9e-229 797.0 515 75.5
Psat1g047360 Pisum sativum HOM05D003954 ORTHO05D004627 3.4e-228 795.0 519 73.2
Atru.chr7.1463 Acer truncatum HOM05D003954 ORTHO05D004627 4.4e-228 794.7 464 81.5
arahy.Tifrunner.gnm1.ann1.UV3YSF Arachis hypogaea HOM05D003954 ORTHO05D004627 1.7e-227 792.7 516 76.2
Psat7g016920 Pisum sativum HOM05D003954 ORTHO05D004627 1.7e-227 792.7 492 78.3
Medtr6g088695 Medicago truncatula HOM05D003954 ORTHO05D004627 4.9e-227 791.2 519 74.0
SalBow6G3745 Salvia bowleyana HOM05D003954 ORTHO05D004627 4.9e-227 791.2 515 74.8
PSO210G6242 Papaver somniferum HOM05D003954 ORTHO05D004627 1.4e-226 789.6 524 73.1
Sc18g0001490 Simmondsia chinensis HOM05D003954 ORTHO05D004627 1.8e-226 789.3 506 75.9
Prupe.7G219900 Prunus persica HOM05D003954 ORTHO05D004627 1.2e-225 786.6 464 81.0
Rhsim03G0236700 Rhododendron simsii HOM05D003954 ORTHO05D004627 1.6e-225 786.2 520 75.2
PSO210G3120 Papaver somniferum HOM05D003954 ORTHO05D004627 2.0e-225 785.8 524 73.1
Lalb_Chr24g0397311 Lupinus albus HOM05D003954 ORTHO05D004627 5.9e-225 784.3 523 73.4
PSO063G1218 Papaver somniferum HOM05D003954 ORTHO05D004627 1.3e-224 783.1 512 74.6
MELO3C015411.2 Cucumis melo HOM05D003954 ORTHO05D004627 2.9e-224 781.9 496 75.4
Nn8g39063 Nelumbo nucifera HOM05D003954 ORTHO05D004627 5.0e-224 781.2 469 79.5
Sed0021958 Sechium edule HOM05D003954 ORTHO05D004627 1.9e-223 779.2 467 79.4
Duzib187G1161 Durio zibethinus HOM05D003954 ORTHO05D004627 3.3e-223 778.5 520 72.5
PSO832G3271 Papaver somniferum HOM05D003954 ORTHO05D004627 3.3e-223 778.5 512 74.0
Lj2g0001823 Lotus japonicus HOM05D003954 ORTHO05D004627 4.3e-223 778.1 520 74.6
Glyma.16G078400 Glycine max HOM05D003954 ORTHO05D004627 2.1e-222 775.8 520 72.5
TWI32G1148 Tripterygium wilfordii HOM05D003954 ORTHO05D004627 2.1e-222 775.8 520 74.4
Phvul.004G176200 Phaseolus vulgaris HOM05D003954 ORTHO05D004627 3.6e-222 775.0 519 72.8
vmacro10852 Vaccinium macrocarpon HOM05D003954 ORTHO05D004627 2.3e-221 772.3 573 68.2
Glyma.01G007900 Glycine max HOM05D003954 ORTHO05D004627 6.8e-221 770.8 519 72.4
HPP92_001552 Vanilla planifolia HOM05D003954 ORTHO05D004627 9.8e-220 766.9 516 71.7
TAR633G1204 Trochodendron aralioides HOM05D003954 ORTHO05D004627 2.9e-219 765.4 470 77.7
unitig_578.g15920 Utricularia gibba HOM05D003954 ORTHO05D004627 3.2e-218 761.9 550 70.2
ATR0681G291 Amborella trichopoda HOM05D003954 ORTHO05D004627 2.0e-217 759.2 520 71.5
arahy.Tifrunner.gnm1.ann1.LVXR97 Arachis hypogaea HOM05D003954 ORTHO05D004627 1.5e-215 753.1 490 75.9
arahy.Tifrunner.gnm1.ann1.KIU7DS Arachis hypogaea HOM05D003954 ORTHO05D004627 1.6e-214 749.6 521 70.4
Lalb_Chr22g0352551 Lupinus albus HOM05D003954 ORTHO05D004627 1.6e-214 749.6 552 68.3
arahy.Tifrunner.gnm1.ann1.1X3G68 Arachis hypogaea HOM05D003954 ORTHO05D004627 2.1e-214 749.2 521 70.4
AUR62021404 Chenopodium quinoa HOM05D003954 ORTHO05D004627 2.1e-214 749.2 520 69.8
Lsat_1_v5_gn_7_39841 Lactuca sativa HOM05D003954 ORTHO05D004627 2.1e-214 749.2 520 70.6
AUR62010893 Chenopodium quinoa HOM05D003954 ORTHO05D004627 1.4e-213 746.5 520 69.6
COL.COLO4_34744 Corchorus olitorius HOM05D003954 ORTHO05D004627 4.0e-213 745.0 561 67.9
CSS0033107 Camellia sinensis var. sinensis HOM05D003954 ORTHO05D004627 3.4e-212 741.9 520 71.7
CDE04G2595 Ceratophyllum demersum HOM05D003954 ORTHO05D004627 3.2e-210 735.3 518 68.5
TPR.G21381 Trifolium pratense HOM05D003954 ORTHO05D004627 1.3e-203 713.4 540 66.9
CDE07G1077 Ceratophyllum demersum HOM05D003954 ORTHO05D004627 4.1e-202 708.4 520 67.9
Ah.14g083230 Amaranthus hybridus HOM05D003954 ORTHO05D004627 1.5e-196 689.9 520 66.0
Lj7A665G29 Lonicera japonica HOM05D003954 ORTHO05D004627 8.4e-195 684.1 502 71.1
VMungo0464G1304 Vigna mungo HOM05D003954 ORTHO05D004627 7.1e-194 681.0 529 65.2
FvH4_1g06110 Fragaria vesca HOM05D003954 ORTHO05D004627 1.1e-183 647.1 377 81.7
Lsat_1_v5_gn_5_144920 Lactuca sativa HOM05D003954 ORTHO05D004627 6.2e-182 641.3 480 66.9
Dinv41667 Davidia involucrata HOM05D003954 ORTHO05D004627 1.1e-181 640.6 380 82.1
TPR.G23479 Trifolium pratense HOM05D003954 ORTHO05D004627 3.0e-176 622.5 382 78.3
AagrBONN_evm.TU.Sc2ySwM_228.2751 Anthoceros agrestis HOM05D003954 ORTHO05D004627 7.6e-172 607.8 487 61.0
Medtr8g102490 Medicago truncatula HOM05D003954 ORTHO05D004627 3.8e-171 605.5 480 65.2
SHI02691 Sapria himalayana HOM05D003954 ORTHO05D004627 1.4e-170 603.6 557 57.3
SMO367G0175 Selaginella moellendorffii HOM05D003954 ORTHO05D004627 1.9e-167 593.2 449 61.7
CAN.G3537.1 Capsicum annuum HOM05D003954 ORTHO05D004627 2.5e-159 566.2 289 94.8
Pp3c16_7990 Physcomitrium patens HOM05D003954 ORTHO05D004627 1.6e-158 563.5 472 57.6
Mapoly0082s0037 Marchantia polymorpha HOM05D003954 ORTHO05D004627 2.2e-150 536.6 469 56.9
DCAR_028664 Daucus carota HOM05D003954 ORTHO05D004627 5.7e-143 511.9 352 73.6
Lj4C389T2 Lonicera japonica HOM05D003954 ORTHO05D004627 3.7e-126 456.1 288 77.1
TAR626G0478 Trochodendron aralioides HOM05D003954 ORTHO05D004627 1.4e-125 454.1 265 78.5
A09p12640 Brassica napus HOM05D003954 ORTHO05D004627 1.6e-124 450.7 293 73.4
Ca_25572_v3 Cicer arietinum L. HOM05D003954 ORTHO05D004627 5.9e-124 448.7 291 75.9
Zm00001eb365210 Zea mays HOM05D003954 ORTHO05D004627 5.9e-124 448.7 284 76.1
SEGI_27682 Sequoiadendron giganteum HOM05D003954 ORTHO05D004627 4.0e-104 382.9 250 73.2
ClCG03G016150 Citrullus lanatus HOM05D003954 ORTHO05D004627 8.9e-96 355.1 247 70.9
Actinidia17525 Actinidia chinensis HOM05D003954 ORTHO05D004627 1.7e-78 297.7 204 73.0
MCO02G294 Micromonas commoda HOM05D003954 ORTHO05D004627 4.3e-58 229.9 453 32.9
TPR.G23455 Trifolium pratense HOM05D003954 ORTHO05D004627 3.2e-53 213.8 137 75.9
PRCOL_00001038 Prasinoderma coloniale HOM05D003954 ORTHO05D004627 2.1e-49 201.1 481 31.2
Actinidia32652 Actinidia chinensis HOM05D003954 ORTHO05D004627 5.3e-40 169.9 203 48.3
SEGI_30237 Sequoiadendron giganteum HOM05D003954 ORTHO05D004627 2.5e-37 161.0 141 56.0
Oeu053184.3 Olea europaea HOM05D000113 ORTHO05D010194 1.0e-35 155.6 109 69.7
Os01g0906000 Oryza sativa ssp. japonica HOM05D003954 ORTHO05D004627 2.4e-24 117.9 86 66.3
Zm00001eb132850 Zea mays HOM05D003954 ORTHO05D004627 2.7e-20 104.4 59 78.0
Actinidia34604 Actinidia chinensis HOM05D003954 ORTHO05D004627 4.0e-19 100.5 142 47.2
MD01G1180200 Malus domestica HOM05D003954 ORTHO05D004627 1.5e-18 98.6 60 73.3
Cre09.g409250 Chlamydomonas reinhardtii HOM05D003954 ORTHO05D004627 2.4e-16 91.3 148 35.1
Actinidia32651 Actinidia chinensis HOM05D003954 ORTHO05D004627 5.5e-13 80.1 165 37.6
CAN.G195.50 Capsicum annuum HOM05D003954 ORTHO05D004627 1.8e-08 65.1 47 68.1


User provided reference genes

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