Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen12g002720 Solanum pennellii HOM05D008728 ORTHO05D016388 5.4e-19 97.4 84 100.0
Solyc12g006760.1 Solanum lycopersicum HOM05D008728 ORTHO05D016388 2.5e-16 88.6 80 90.0
Sopen01g007700 Solanum pennellii HOM05D008728 ORTHO05D016388 1.1e-14 83.2 84 86.9
Sopen12g002730 Solanum pennellii HOM05D008728 ORTHO05D016388 1.4e-14 82.8 84 88.1
Solyc12g006770.1 Solanum lycopersicum HOM05D008728 ORTHO05D016388 2.4e-14 82.0 84 84.5
Sopen12g002740 Solanum pennellii HOM05D008728 ORTHO05D016388 2.0e-13 79.0 36 97.2
PGSC0003DMG400020687 Solanum tuberosum HOM05D008728 ORTHO05D016388 2.2e-12 75.5 84 79.8
Solyc12g006750.1 Solanum lycopersicum HOM05D008728 ORTHO05D016388 6.4e-12 73.9 55 87.3
PGSC0003DMG400020677 Solanum tuberosum HOM05D008728 ORTHO05D011731 8.4e-12 73.6 84 85.7
Sopen12g002710 Solanum pennellii HOM05D008728 ORTHO05D016388 4.6e-10 67.8 59 86.4
PGSC0003DMG400030388 Solanum tuberosum HOM05D008728 ORTHO05D011731 1.0e-09 66.6 83 78.3
PGSC0003DMG400020678 Solanum tuberosum HOM05D008728 ORTHO05D011731 8.7e-09 63.5 35 82.9
Nitab4.5_0001164g0080 Nicotiana tabacum HOM05D008728 ORTHO05D011731 2.5e-08 62.0 37 83.8
Nitab4.5_0011079g0020 Nicotiana tabacum HOM05D008728 ORTHO05D011731 1.2e-07 59.7 37 75.7
Nitab4.5_0008336g0030 Nicotiana tabacum HOM05D008728 ORTHO05D011731 2.1e-07 58.9 37 81.1
Nitab4.5_0005520g0020 Nicotiana tabacum HOM05D008728 ORTHO05D011731 3.6e-07 58.2 37 73.0
Nitab4.5_0008336g0050 Nicotiana tabacum HOM05D008728 ORTHO05D283574 3.6e-07 58.2 37 78.4
Solyc12g006780.2 Solanum lycopersicum HOM05D008728 ORTHO05D011731 1.1e-06 56.6 35 74.3
Nitab4.5_0005520g0010 Nicotiana tabacum HOM05D008728 ORTHO05D011731 1.8e-06 55.8 37 70.3
PGSC0003DMG400020670 Solanum tuberosum HOM05D008728 ORTHO05D011731 2.4e-06 55.5 37 75.7
Nitab4.5_0001164g0110 Nicotiana tabacum HOM05D008728 ORTHO05D011731 4.0e-06 54.7 37 75.7
Nitab4.5_0006991g0020 Nicotiana tabacum HOM05D008728 ORTHO05D011731 5.2e-06 54.3 35 77.1
Peaxi162Scf00984g00219 Petunia axillaris HOM05D008728 ORTHO05D011731 9.0e-06 53.5 38 71.1


User provided reference genes

Program Settings