Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g030630 Solanum pennellii HOM05D006681 ORTHO05D008338 6.2e-185 650.6 314 100.0
Solyc11g072970.2 Solanum lycopersicum HOM05D006681 ORTHO05D008338 1.3e-182 642.9 314 98.4
PGSC0003DMG400015551 Solanum tuberosum HOM05D006681 ORTHO05D008338 2.8e-169 598.6 300 95.7
CAN.G1647.1 Capsicum annuum HOM05D006681 ORTHO05D008338 8.7e-155 550.4 299 89.3
Peaxi162Scf00411g00068 Petunia axillaris HOM05D006681 ORTHO05D008338 9.6e-154 547.0 300 86.3
Nitab4.5_0002684g0160 Nicotiana tabacum HOM05D006681 ORTHO05D008338 5.5e-149 531.2 305 84.6
CSS0007914 Camellia sinensis var. sinensis HOM05D006681 ORTHO05D008338 7.7e-127 457.6 287 73.2
CSS0025304 Camellia sinensis var. sinensis HOM05D006681 ORTHO05D008338 2.2e-126 456.1 287 73.2
Oeu040277.1 Olea europaea HOM05D006681 ORTHO05D008338 5.5e-125 451.4 288 75.0
FvH4_3g34680 Fragaria vesca HOM05D006681 ORTHO05D008338 1.4e-123 446.8 295 72.2
FAN11G3596 Fragaria x ananassa HOM05D006681 ORTHO05D008338 1.8e-123 446.4 295 72.2
FAN16G0358 Fragaria x ananassa HOM05D006681 ORTHO05D008338 1.8e-123 446.4 283 73.5
Atru.chr3.3798 Acer truncatum HOM05D006681 ORTHO05D008338 6.7e-123 444.5 287 72.1
QL01p034239 Quercus lobata HOM05D006681 ORTHO05D008338 4.4e-122 441.8 298 69.8
TAR633G1649 Trochodendron aralioides HOM05D006681 ORTHO05D008338 7.5e-122 441.0 287 72.5
TPR.G3006 Trifolium pratense HOM05D006681 ORTHO05D008338 8.2e-121 437.6 297 72.7
ECA236G1321 Erigeron canadensis HOM05D006681 ORTHO05D008338 1.1e-120 437.2 283 73.9
RcHm_v2.0_Chr5g0062361 Rosa chinensis HOM05D006681 ORTHO05D008338 2.4e-120 436.0 283 73.5
HanXRQChr05g0134071 Helianthus annuus HOM05D006681 ORTHO05D008338 3.1e-120 435.6 287 73.9
Thecc.09G329700 Theobroma cacao HOM05D006681 ORTHO05D008338 1.6e-119 433.3 294 69.7
MD11G1116600 Malus domestica HOM05D006681 ORTHO05D008338 2.0e-119 433.0 287 71.8
CiPaw.13G101600 Carya illinoinensis HOM05D006681 ORTHO05D008338 2.6e-119 432.6 283 72.8
Cc01_g12140 Coffea canephora HOM05D006681 ORTHO05D008338 3.5e-119 432.2 288 69.8
Cfa011429 Carpinus fangiana HOM05D006681 ORTHO05D008338 1.0e-118 430.6 283 73.9
Lj3g0002575 Lotus japonicus HOM05D006681 ORTHO05D008338 1.0e-118 430.6 296 72.3
Ciclev10028948m.g Citrus clementina HOM05D006681 ORTHO05D008338 1.7e-118 429.9 287 71.8
GSVIVG01025054001 Vitis vinifera HOM05D006681 ORTHO05D008338 1.7e-118 429.9 288 69.1
FAN21G0481 Fragaria x ananassa HOM05D006681 ORTHO05D008338 2.2e-118 429.5 313 66.5
Prupe.6G086900 Prunus persica HOM05D006681 ORTHO05D008338 3.8e-118 428.7 299 68.6
Lsat_1_v5_gn_8_78740 Lactuca sativa HOM05D006681 ORTHO05D008338 5.0e-118 428.3 283 72.1
Psat7g220640 Pisum sativum HOM05D006681 ORTHO05D008338 5.0e-118 428.3 297 71.0
Duzib170G0311 Durio zibethinus HOM05D006681 ORTHO05D008338 6.5e-118 427.9 287 68.3
Potri.009G026700 Populus trichocarpa HOM05D006681 ORTHO05D008338 6.5e-118 427.9 283 70.3
arahy.Tifrunner.gnm1.ann1.SK7GFS Arachis hypogaea HOM05D006681 ORTHO05D008338 2.5e-117 426.0 290 69.3
Nn2g10531 Nelumbo nucifera HOM05D006681 ORTHO05D008338 2.5e-117 426.0 283 70.7
Ca_19209_v3 Cicer arietinum L. HOM05D006681 ORTHO05D008338 3.2e-117 425.6 282 72.7
Medtr4g062130 Medicago truncatula HOM05D006681 ORTHO05D008338 5.5e-117 424.9 282 73.8
Sabra09G0017800 Salix brachista HOM05D006681 ORTHO05D008338 7.2e-117 424.5 283 69.6
Nitab4.5_0002684g0190 Nicotiana tabacum HOM05D006681 ORTHO05D008338 1.2e-116 423.7 300 72.0
TWI31G0387 Tripterygium wilfordii HOM05D006681 ORTHO05D008338 1.2e-116 423.7 283 71.0
arahy.Tifrunner.gnm1.ann1.FZI6FG Arachis hypogaea HOM05D006681 ORTHO05D008338 2.1e-116 422.9 286 69.6
Gorai.009G102400 Gossypium raimondii HOM05D006681 ORTHO05D008338 2.1e-116 422.9 283 69.6
CANSAT54G2145 Cannabis sativa HOM05D006681 ORTHO05D008338 3.6e-116 422.2 285 68.4
Gohir.D05G098750 Gossypium hirsutum HOM05D006681 ORTHO05D008338 8.0e-116 421.0 283 69.3
Migut.D02146 Erythranthe guttata HOM05D006681 ORTHO05D008338 1.0e-115 420.6 294 68.0
Nitab4.5_0001953g0020 Nicotiana tabacum HOM05D006681 ORTHO05D008338 2.3e-115 419.5 283 74.9
Gohir.A05G098700 Gossypium hirsutum HOM05D006681 ORTHO05D008338 4.0e-115 418.7 283 68.9
Eucgr.J02098 Eucalyptus grandis HOM05D006681 ORTHO05D008338 6.8e-115 417.9 294 67.0
Rhsim13G0088300 Rhododendron simsii HOM05D006681 ORTHO05D008338 8.8e-115 417.5 301 67.1
Lalb_Chr03g0026931 Lupinus albus HOM05D006681 ORTHO05D008338 1.2e-114 417.2 302 66.6
Phvul.011G069100 Phaseolus vulgaris HOM05D006681 ORTHO05D008338 1.2e-114 417.2 294 69.0
Sed0010670 Sechium edule HOM05D006681 ORTHO05D008338 3.4e-114 415.6 289 68.2
PSO339G5789 Papaver somniferum HOM05D006681 ORTHO05D008338 2.2e-113 412.9 287 69.3
DCAR_006014 Daucus carota HOM05D006681 ORTHO05D008338 2.8e-113 412.5 298 67.4
PSO384G0101 Papaver somniferum HOM05D006681 ORTHO05D008338 3.7e-113 412.1 287 69.3
COL.COLO4_18427 Corchorus olitorius HOM05D006681 ORTHO05D008338 4.8e-113 411.8 296 65.9
SalBow3G4078 Salvia bowleyana HOM05D006681 ORTHO05D008338 4.8e-113 411.8 287 67.6
VMungo1127G1059 Vigna mungo HOM05D006681 ORTHO05D008338 8.3e-113 411.0 318 65.1
EL10Ac7g15941 Beta vulgaris HOM05D006681 ORTHO05D008338 1.4e-112 410.2 284 68.3
THA.LOC104814870 Tarenaya hassleriana HOM05D006681 ORTHO05D008338 1.8e-112 409.8 295 65.4
CsaV3_6G022080 Cucumis sativus L. HOM05D006681 ORTHO05D008338 3.1e-112 409.1 289 66.1
MSTRG.18607 Avicennia marina HOM05D006681 ORTHO05D008338 4.5e-111 405.2 288 67.0
PGR119G1802 Punica granatum HOM05D006681 ORTHO05D008338 5.9e-111 404.8 318 62.3
Aqoxy4G03072 Aquilegia oxysepala HOM05D006681 ORTHO05D008338 6.5e-110 401.4 282 66.0
AUR62001852 Chenopodium quinoa HOM05D006681 ORTHO05D008338 7.2e-109 397.9 283 67.8
ClCG02G020630 Citrullus lanatus HOM05D006681 ORTHO05D008338 9.4e-109 397.5 340 59.4
HPP92_006593 Vanilla planifolia HOM05D006681 ORTHO05D008338 3.6e-108 395.6 293 63.8
MBI14_g35939_MAGBIO Magnolia biondii HOM05D006681 ORTHO05D008338 4.7e-108 395.2 287 63.8
AL5G24960 Arabidopsis lyrata HOM05D006681 ORTHO05D008338 1.4e-107 393.7 287 64.1
Carub.0005s1203 Capsella rubella HOM05D006681 ORTHO05D008338 1.4e-107 393.7 289 62.3
SGA_v2.0_scaffold134G34764 Striga asiatica HOM05D006681 ORTHO05D008338 1.4e-107 393.7 256 72.7
Os05g0117500 Oryza sativa ssp. japonica HOM05D006681 ORTHO05D008338 2.3e-107 392.9 288 62.2
AT3G46200 Arabidopsis thaliana HOM05D006681 ORTHO05D008338 5.2e-107 391.7 287 64.1
Glyma.12G075000 Glycine max HOM05D006681 ORTHO05D008338 1.2e-106 390.6 295 65.4
Thhalv10002615m.g Eutrema salsugineum HOM05D006681 ORTHO05D008338 2.6e-106 389.4 284 64.4
BraA06t25188Z Brassica rapa HOM05D006681 ORTHO05D008338 6.3e-105 384.8 296 62.2
A06p21000 Brassica napus HOM05D006681 ORTHO05D008338 1.4e-104 383.6 296 62.2
FAN25G3219 Fragaria x ananassa HOM05D006681 ORTHO05D008338 5.4e-104 381.7 281 66.9
BcaC01g01926 Brassica carinata HOM05D006681 ORTHO05D008338 9.1e-104 380.9 296 61.1
Sp5g15430 Schrenkiella parvula HOM05D006681 ORTHO05D008338 2.7e-103 379.4 286 62.2
C03p70520 Brassica napus HOM05D006681 ORTHO05D008338 3.5e-103 379.0 296 61.5
BolC3t19336H Brassica oleracea HOM05D006681 ORTHO05D008338 3.5e-103 379.0 296 61.5
Manes.11G136100 Manihot esculenta HOM05D006681 ORTHO05D008338 7.7e-103 377.9 288 64.6
Lj1A175T11 Lonicera japonica HOM05D006681 ORTHO05D008338 3.8e-102 375.6 283 67.1
Carub.0003s2829 Capsella rubella HOM05D006681 ORTHO05D008338 1.2e-100 370.5 289 59.9
vmacro03125 Vaccinium macrocarpon HOM05D006681 ORTHO05D008338 4.7e-100 368.6 293 62.8
Zm00001eb266060 Zea mays HOM05D006681 ORTHO05D008338 4.7e-100 368.6 286 59.8
Nitab4.5_0001953g0050 Nicotiana tabacum HOM05D006681 ORTHO05D008338 6.8e-99 364.8 300 63.3
Aa31LG4G15300 Aethionema arabicum HOM05D006681 ORTHO05D008338 1.8e-96 356.7 372 49.7
Dinv32860 Davidia involucrata HOM05D006681 ORTHO05D008338 7.8e-95 351.3 224 74.6
Ah.08g214980 Amaranthus hybridus HOM05D006681 ORTHO05D008338 5.0e-94 348.6 286 60.1
Thhalv10002633m.g Eutrema salsugineum HOM05D006681 ORTHO05D008338 1.6e-92 343.6 284 58.8
Lj3g0011020 Lotus japonicus HOM05D006681 ORTHO05D008338 6.2e-92 341.7 224 74.1
AUR62009646 Chenopodium quinoa HOM05D006681 ORTHO05D008338 5.2e-91 338.6 283 58.3
Pp3c11_23040 Physcomitrium patens HOM05D006681 ORTHO05D008338 1.5e-85 320.5 281 53.7
Duzib168G1095 Durio zibethinus HOM05D006681 ORTHO05D008338 7.3e-85 318.2 295 53.6
SMO367G0798 Selaginella moellendorffii HOM05D006681 ORTHO05D008338 1.2e-84 317.4 281 54.8
Mapoly0128s0008 Marchantia polymorpha HOM05D006681 ORTHO05D008338 6.8e-83 311.6 282 53.5
Cpa.g.sc2126.1 Carica papaya HOM05D006681 ORTHO05D008338 2.0e-82 310.1 218 68.3
AagrBONN_evm.TU.Sc2ySwM_228.1772 Anthoceros agrestis HOM05D006681 ORTHO05D008338 9.8e-82 307.8 282 53.5
MELO3C013668.2 Cucumis melo HOM05D006681 ORTHO05D008338 8.3e-81 304.7 257 59.1
Haze_24007 Corylus avellana HOM05D006681 ORTHO05D008338 1.3e-78 297.4 440 42.7
Sc06g0008190 Simmondsia chinensis HOM05D006681 ORTHO05D008338 3.4e-66 256.1 182 65.9
Hund05017 Selenicereus undatus HOM05D006681 ORTHO05D008338 9.9e-66 254.6 291 46.7
CBR_g415 Chara braunii HOM05D006681 ORTHO05D008338 4.6e-63 245.7 338 39.9
AL1G56400 Arabidopsis lyrata HOM05D006681 ORTHO05D008338 6.9e-59 231.9 186 59.7
SEGI_27570 Sequoiadendron giganteum HOM05D006681 ORTHO05D008338 7.9e-55 218.4 195 56.4
Pp3c11_23047 Physcomitrium patens HOM05D006681 ORTHO05D008338 2.1e-52 210.3 173 57.2
ATR0759G055 Amborella trichopoda HOM05D006681 ORTHO05D008338 2.8e-52 209.9 159 61.0
CAN.G1289.2 Capsicum annuum HOM05D006681 ORTHO05D008338 2.2e-49 200.3 208 54.8
Nitab4.5_0000766g0030 Nicotiana tabacum HOM05D006681 ORTHO05D008338 1.1e-45 188.0 143 68.5
Sc06g0008200 Simmondsia chinensis HOM05D006681 ORTHO05D008338 5.3e-35 152.5 118 58.5
Glyma.11G145018 Glycine max HOM05D006681 ORTHO05D008338 2.6e-34 150.2 117 59.8
PRCOL_00001211 Prasinoderma coloniale HOM05D006681 ORTHO05D008338 3.3e-29 133.3 435 24.1
MCO11G760 Micromonas commoda HOM05D006681 ORTHO05D008338 6.5e-25 119.0 265 29.4
MD03G1102800 Malus domestica HOM05D006681 ORTHO05D008338 8.2e-20 102.1 103 55.3
Actinidia20468 Actinidia chinensis HOM05D006681 ORTHO05D008338 4.1e-19 99.8 60 78.3
CDE08G1356 Ceratophyllum demersum HOM05D006681 ORTHO05D008338 5.0e-17 92.8 67 61.2
Nitab4.5_0001068g0110 Nicotiana tabacum HOM05D006681 ORTHO05D008338 4.2e-16 89.7 53 84.9
CARHR154620 Cardamine hirsuta HOM05D006681 ORTHO05D008338 4.7e-07 59.7 54 57.4


User provided reference genes

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