Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g030440 Solanum pennellii HOM05D008034 ORTHO05D010051 9.0e-49 196.4 88 100.0
Solyc11g072765.1 Solanum lycopersicum HOM05D008034 ORTHO05D010051 3.8e-47 191.0 88 97.7
CAN.G84.9 Capsicum annuum HOM05D008034 ORTHO05D010051 2.5e-43 178.3 88 88.6
Nitab4.5_0007786g0020 Nicotiana tabacum HOM05D008034 ORTHO05D010051 3.8e-39 164.5 88 80.7
Nitab4.5_0002380g0020 Nicotiana tabacum HOM05D008034 ORTHO05D010051 4.2e-38 161.0 80 86.2
Hma1.2p1_0035F.1_g021690 Hydrangea macrophylla HOM05D008034 ORTHO05D010051 1.9e-35 152.1 84 73.8
QL01p035245 Quercus lobata HOM05D008034 ORTHO05D010051 2.5e-35 151.8 81 76.5
Manes.11G137800 Manihot esculenta HOM05D008034 ORTHO05D010051 1.3e-34 149.4 85 74.1
Actinidia27676 Actinidia chinensis HOM05D008034 ORTHO05D010051 2.8e-34 148.3 81 75.3
Actinidia37272 Actinidia chinensis HOM05D008034 ORTHO05D010051 6.2e-34 147.1 81 74.1
Eucgr.B02437 Eucalyptus grandis HOM05D008034 ORTHO05D010051 8.1e-34 146.7 78 75.6
Dinv06338 Davidia involucrata HOM05D008034 ORTHO05D010051 2.4e-33 145.2 85 69.4
Thecc.09G333100 Theobroma cacao HOM05D008034 ORTHO05D010051 4.0e-33 144.4 81 74.1
VMungo1383G3175 Vigna mungo HOM05D008034 ORTHO05D010051 5.3e-33 144.1 81 71.6
GSVIVG01025076001 Vitis vinifera HOM05D008034 ORTHO05D010051 5.3e-33 144.1 84 69.0
Glyma.18G177500 Glycine max HOM05D008034 ORTHO05D010051 6.9e-33 143.7 80 72.5
Psat3g140960 Pisum sativum HOM05D008034 ORTHO05D010051 6.9e-33 143.7 81 75.3
ClCG02G020510 Citrullus lanatus HOM05D008034 ORTHO05D010051 1.2e-32 142.9 81 75.3
Lsat_1_v5_gn_9_21900 Lactuca sativa HOM05D008034 ORTHO05D010051 1.2e-32 142.9 82 70.7
Phvul.008G100300 Phaseolus vulgaris HOM05D008034 ORTHO05D010051 1.2e-32 142.9 81 71.6
CsaV3_6G021950 Cucumis sativus L. HOM05D008034 ORTHO05D010051 1.5e-32 142.5 81 74.1
Medtr7g060450 Medicago truncatula HOM05D008034 ORTHO05D010051 1.5e-32 142.5 79 74.7
MELO3C025715.2 Cucumis melo HOM05D008034 ORTHO05D010051 2.0e-32 142.1 81 74.1
TWI75G0515 Tripterygium wilfordii HOM05D008034 ORTHO05D010051 2.0e-32 142.1 80 73.8
CSS0025126 Camellia sinensis var. sinensis HOM05D008034 ORTHO05D010051 3.4e-32 141.4 82 74.4
Ciclev10029356m.g Citrus clementina HOM05D008034 ORTHO05D010051 3.4e-32 141.4 80 73.8
RhsimUnG0139800 Rhododendron simsii HOM05D001089 ORTHO05D000920 4.5e-32 141.0 80 73.8
Atru.chr3.3772 Acer truncatum HOM05D008034 ORTHO05D010051 7.6e-32 140.2 81 71.6
Rhsim13G0089800 Rhododendron simsii HOM05D001089 ORTHO05D000920 9.9e-32 139.8 80 73.8
FvH4_3g34350 Fragaria vesca HOM05D008034 ORTHO05D010051 1.7e-31 139.0 81 75.3
Duzib170G0117 Durio zibethinus HOM05D008034 ORTHO05D010051 2.2e-31 138.7 79 69.6
Haze_23982 Corylus avellana HOM05D008034 ORTHO05D010051 4.9e-31 137.5 81 71.6
ECA247G3899 Erigeron canadensis HOM05D008034 ORTHO05D010051 4.9e-31 137.5 82 65.9
Aqoxy4G03114 Aquilegia oxysepala HOM05D008034 ORTHO05D010051 1.1e-30 136.3 80 71.2
arahy.Tifrunner.gnm1.ann1.JRZ5DE Arachis hypogaea HOM05D008034 ORTHO05D010051 1.1e-30 136.3 83 71.1
Cpa.g.sc139.12 Carica papaya HOM05D008034 ORTHO05D010051 1.4e-30 136.0 86 61.6
Gohir.A07G094200 Gossypium hirsutum HOM05D008034 ORTHO05D010051 1.4e-30 136.0 81 67.9
Gohir.D07G098700 Gossypium hirsutum HOM05D008034 ORTHO05D010051 1.4e-30 136.0 81 67.9
Gorai.001G106200 Gossypium raimondii HOM05D008034 ORTHO05D010051 1.4e-30 136.0 81 67.9
HanXRQChr08g0230621 Helianthus annuus HOM05D008034 ORTHO05D010051 1.4e-30 136.0 80 66.2
Glyma.08G359000 Glycine max HOM05D008034 ORTHO05D010051 1.9e-30 135.6 78 70.5
Lalb_Chr03g0035081 Lupinus albus HOM05D008034 ORTHO05D010051 2.5e-30 135.2 81 70.4
Sed0016706 Sechium edule HOM05D008034 ORTHO05D010051 3.2e-30 134.8 81 70.4
arahy.Tifrunner.gnm1.ann1.YB7TH1 Arachis hypogaea HOM05D008034 ORTHO05D010051 5.5e-30 134.0 83 71.1
Prupe.6G089000 Prunus persica HOM05D008034 ORTHO05D010051 5.5e-30 134.0 84 71.4
CiPaw.13G103300 Carya illinoinensis HOM05D008034 ORTHO05D010051 7.1e-30 133.7 81 69.1
TAR623G1523 Trochodendron aralioides HOM05D008034 ORTHO05D010051 7.1e-30 133.7 80 68.8
COL.COLO4_18407 Corchorus olitorius HOM05D008034 ORTHO05D010051 9.3e-30 133.3 84 69.0
Ah.15g096410 Amaranthus hybridus HOM05D008034 ORTHO05D010051 1.2e-29 132.9 80 70.0
Cfa011409 Carpinus fangiana HOM05D008034 ORTHO05D010051 1.2e-29 132.9 83 68.7
Lalb_Chr03g0042121 Lupinus albus HOM05D008034 ORTHO05D010051 2.7e-29 131.7 81 67.9
PSO729G0256 Papaver somniferum HOM05D008034 ORTHO05D010051 1.9e-27 125.6 78 66.7
EL10Ac7g15930 Beta vulgaris HOM05D008034 ORTHO05D010051 2.5e-27 125.2 80 66.2
PSO724G0148 Papaver somniferum HOM05D008034 ORTHO05D010051 2.5e-27 125.2 78 65.4
CANSAT54G0614 Cannabis sativa HOM05D008034 ORTHO05D010051 5.6e-27 124.0 89 62.9
Nn2g10576 Nelumbo nucifera HOM05D008034 ORTHO05D010051 2.8e-26 121.7 84 61.9
Sc21g0005330 Simmondsia chinensis HOM05D008034 ORTHO05D010051 6.2e-26 120.6 75 64.0
AUR62009660 Chenopodium quinoa HOM05D008034 ORTHO05D010051 4.0e-25 117.9 80 62.5
FAN11G2200 Fragaria x ananassa HOM05D008034 ORTHO05D010051 1.2e-24 116.3 68 77.9
PGR102G1024 Punica granatum HOM05D008034 ORTHO05D010051 1.2e-24 116.3 77 63.6
ATR0594G086 Amborella trichopoda HOM05D008034 ORTHO05D010051 1.5e-24 115.9 80 60.0
AUR62001862 Chenopodium quinoa HOM05D008034 ORTHO05D010051 1.5e-24 115.9 75 65.3
MBI14_g16339_MAGBIO Magnolia biondii HOM05D008034 ORTHO05D010051 3.4e-24 114.8 84 57.1
PSO416G0003 Papaver somniferum HOM05D008034 ORTHO05D010051 5.3e-17 90.9 58 67.2
MD07G1183300 Malus domestica HOM05D008034 ORTHO05D010051 7.9e-13 77.0 72 45.8
SEGI_07630 Sequoiadendron giganteum HOM05D008034 ORTHO05D010051 1.0e-12 76.6 69 47.8
Haze_16964 Corylus avellana HOM05D008034 ORTHO05D010051 1.8e-12 75.9 74 41.9
SEGI_26238 Sequoiadendron giganteum HOM05D008034 ORTHO05D010051 3.9e-12 74.7 71 47.9
SEGI_39089 Sequoiadendron giganteum HOM05D008034 ORTHO05D010051 3.9e-12 74.7 71 47.9
ATR0594G007 Amborella trichopoda HOM05D001120 ORTHO05D010051 5.1e-12 74.3 72 45.8
FAN01G1155 Fragaria x ananassa HOM05D001787 ORTHO05D007379 6.7e-12 73.9 71 45.1
FAN01G1685 Fragaria x ananassa HOM05D001787 ORTHO05D007379 6.7e-12 73.9 71 45.1
Potri.010G214400 Populus trichocarpa HOM05D008034 ORTHO05D010051 6.7e-12 73.9 71 45.1
TPR.G23264 Trifolium pratense HOM05D008034 ORTHO05D010051 6.7e-12 73.9 40 70.0
RcHm_v2.0_Chr1g0364691 Rosa chinensis HOM05D008034 ORTHO05D010051 8.8e-12 73.6 71 45.1
FAN06G2736 Fragaria x ananassa HOM05D001787 ORTHO05D007379 2.0e-11 72.4 71 43.7
Cpa.g.sc10.57 Carica papaya HOM05D001787 ORTHO05D007379 2.5e-11 72.0 69 43.5
FAN10G0756 Fragaria x ananassa HOM05D001787 ORTHO05D007379 3.3e-11 71.6 71 43.7
FAN03G1672 Fragaria x ananassa HOM05D001787 ORTHO05D007379 4.3e-11 71.2 71 43.7
FvH4_7g20661 Fragaria vesca HOM05D008034 ORTHO05D010051 5.7e-11 70.9 71 43.7
FAN06G3907 Fragaria x ananassa HOM05D001787 ORTHO05D007379 5.7e-11 70.9 71 43.7
TAR369G0105 Trochodendron aralioides HOM05D008034 ORTHO05D010051 5.7e-11 70.9 84 41.7
Prupe.2G222000 Prunus persica HOM05D001120 ORTHO05D010051 1.4e-09 66.2 69 43.5
Manes.07G106000 Manihot esculenta HOM05D008034 ORTHO05D002447 2.4e-09 65.5 71 42.3
Nn2g10579 Nelumbo nucifera HOM05D001120 ORTHO05D010051 6.9e-09 63.9 68 41.2
MBI14_g46136_MAGBIO Magnolia biondii HOM05D001120 ORTHO05D002447 7.7e-08 60.5 68 42.6
TAR645G0006 Trochodendron aralioides HOM05D001120 ORTHO05D002447 1.3e-07 59.7 66 37.9
A10p28950 Brassica napus HOM05D001120 ORTHO05D002447 5.0e-07 57.8 70 40.0
BraA10t44942Z Brassica rapa HOM05D001120 ORTHO05D002447 5.0e-07 57.8 70 40.0
Hma1.2p1_0018F.1_g012390 Hydrangea macrophylla HOM05D001120 ORTHO05D002447 5.0e-07 57.8 66 39.4
Os05g0171200 Oryza sativa ssp. japonica HOM05D001120 ORTHO05D002447 1.9e-06 55.8 82 37.8
PGR042G1649 Punica granatum HOM05D001120 ORTHO05D002447 2.5e-06 55.5 74 31.1
SEGI_22870 Sequoiadendron giganteum HOM05D018424 ORTHO05D010051 2.5e-06 55.5 64 32.8
Thecc.06G021100 Theobroma cacao HOM05D001120 ORTHO05D002447 3.2e-06 55.1 64 37.5
BcaC06g32466 Brassica carinata HOM05D001120 ORTHO05D002447 4.2e-06 54.7 70 35.7
Solyc01g104020.2 Solanum lycopersicum HOM05D001120 ORTHO05D002447 4.2e-06 54.7 64 39.1
PGSC0003DMG400023798 Solanum tuberosum HOM05D001120 ORTHO05D002447 4.2e-06 54.7 64 39.1
SEGI_07159 Sequoiadendron giganteum HOM05D018424 ORTHO05D383985 5.5e-06 54.3 64 34.4
SEGI_26515 Sequoiadendron giganteum HOM05D018424 ORTHO05D385050 5.5e-06 54.3 64 34.4
TWI23G0455 Tripterygium wilfordii HOM05D001120 ORTHO05D002447 5.5e-06 54.3 64 35.9
Peaxi162Scf00148g00114 Petunia axillaris HOM05D001120 ORTHO05D002447 7.2e-06 53.9 64 42.2
Sp6g35710 Schrenkiella parvula HOM05D001120 ORTHO05D002447 9.4e-06 53.5 68 35.3
SEGI_12405 Sequoiadendron giganteum HOM05D018424 ORTHO05D010051 9.4e-06 53.5 70 31.4


User provided reference genes

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