Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g030050 Solanum pennellii HOM05D005177 ORTHO05D006175 1.6e-241 839.0 422 100.0
Solyc11g072400.3 Solanum lycopersicum HOM05D005177 ORTHO05D006175 1.0e-227 793.1 412 97.3
PGSC0003DMG400027405 Solanum tuberosum HOM05D005177 ORTHO05D006175 1.1e-221 773.1 412 94.7
Nitab4.5_0002129g0070 Nicotiana tabacum HOM05D005177 ORTHO05D006175 1.4e-184 649.8 414 81.2
Nitab4.5_0001802g0050 Nicotiana tabacum HOM05D005177 ORTHO05D006175 1.4e-160 570.1 374 79.1
CAN.G553.3 Capsicum annuum HOM05D005177 ORTHO05D006175 1.3e-158 563.5 307 88.6
Peaxi162Scf00389g00939 Petunia axillaris HOM05D005177 ORTHO05D006175 1.1e-157 560.5 416 73.3
Dinv32787 Davidia involucrata HOM05D005177 ORTHO05D006175 1.1e-141 507.3 390 65.6
TAR636G0661 Trochodendron aralioides HOM05D005177 ORTHO05D006175 1.7e-137 493.4 390 63.6
Prupe.6G094900 Prunus persica HOM05D005177 ORTHO05D006175 1.2e-135 487.3 401 62.3
Cc01_g11530 Coffea canephora HOM05D005177 ORTHO05D006175 3.9e-134 482.3 409 60.1
Duzib168G0988 Durio zibethinus HOM05D005177 ORTHO05D006175 4.8e-132 475.3 410 61.5
MD03G1105200 Malus domestica HOM05D005177 ORTHO05D006175 4.8e-132 475.3 413 61.0
COL.COLO4_25245 Corchorus olitorius HOM05D005177 ORTHO05D006175 2.4e-131 473.0 413 59.6
Nn2g10682 Nelumbo nucifera HOM05D005177 ORTHO05D006175 3.1e-131 472.6 411 60.1
QL01p037260 Quercus lobata HOM05D005177 ORTHO05D006175 1.5e-130 470.3 401 60.1
Migut.D02184 Erythranthe guttata HOM05D005177 ORTHO05D006175 2.0e-130 469.9 424 58.0
Oeu005908.1 Olea europaea HOM05D005177 ORTHO05D006175 7.6e-130 468.0 402 62.4
Cfa011363 Carpinus fangiana HOM05D005177 ORTHO05D006175 5.0e-129 465.3 384 62.5
Gohir.D02G184700 Gossypium hirsutum HOM05D005177 ORTHO05D006175 5.0e-129 465.3 390 60.0
Gorai.005G207000 Gossypium raimondii HOM05D005177 ORTHO05D006175 5.0e-129 465.3 390 60.0
vmacro14462 Vaccinium macrocarpon HOM05D005177 ORTHO05D006175 8.5e-129 464.5 404 59.4
RcHm_v2.0_Chr5g0060611 Rosa chinensis HOM05D005177 ORTHO05D006175 9.3e-128 461.1 398 59.5
Actinidia03746 Actinidia chinensis HOM05D005177 ORTHO05D006175 2.1e-127 459.9 401 59.6
GSVIVG01025137001 Vitis vinifera HOM05D005177 ORTHO05D006175 3.6e-127 459.1 374 63.1
MSTRG.18639 Avicennia marina HOM05D005177 ORTHO05D006175 8.8e-126 454.5 380 62.1
Duzib170G1166 Durio zibethinus HOM05D005177 ORTHO05D006175 1.5e-125 453.8 423 57.0
TWI79G0119 Tripterygium wilfordii HOM05D005177 ORTHO05D006175 1.9e-125 453.4 408 58.8
Thecc.09G260100 Theobroma cacao HOM05D005177 ORTHO05D006175 4.3e-125 452.2 387 59.7
TWI31G0237 Tripterygium wilfordii HOM05D005177 ORTHO05D006175 5.7e-125 451.8 393 60.3
Manes.11G141500 Manihot esculenta HOM05D005177 ORTHO05D006175 2.2e-124 449.9 409 57.9
unitig_899.g14907 Utricularia gibba HOM05D005177 ORTHO05D006175 5.3e-123 445.3 403 58.6
PSO339G4756 Papaver somniferum HOM05D005177 ORTHO05D006175 1.3e-121 440.7 398 57.8
Atru.chr3.3689 Acer truncatum HOM05D005177 ORTHO05D006175 2.2e-121 439.9 395 58.7
Cpa.g.sc139.70 Carica papaya HOM05D005177 ORTHO05D006175 3.8e-121 439.1 398 58.8
Rhsim01G0220100 Rhododendron simsii HOM05D005177 ORTHO05D006175 5.5e-120 435.3 362 61.6
PGR102G1116 Punica granatum HOM05D005177 ORTHO05D006175 9.4e-120 434.5 390 58.2
Ciclev10028554m.g Citrus clementina HOM05D005177 ORTHO05D006175 8.8e-118 427.9 379 56.7
Aqoxy4G03211 Aquilegia oxysepala HOM05D005177 ORTHO05D006175 1.1e-117 427.6 412 53.2
CANSAT54G2759 Cannabis sativa HOM05D005177 ORTHO05D006175 1.5e-117 427.2 391 55.5
PSO063G2407 Papaver somniferum HOM05D005177 ORTHO05D006175 3.7e-116 422.5 440 53.0
Phvul.011G072700 Phaseolus vulgaris HOM05D005177 ORTHO05D006175 1.5e-114 417.2 377 57.0
Glyma.11G153378 Glycine max HOM05D005177 ORTHO05D006175 2.0e-114 416.8 397 55.9
TPR.G14917 Trifolium pratense HOM05D005177 ORTHO05D006175 4.5e-114 415.6 406 53.2
VMungo1127G2232 Vigna mungo HOM05D005177 ORTHO05D006175 7.7e-114 414.8 396 56.6
DCAR_006046 Daucus carota HOM05D005177 ORTHO05D006175 1.7e-113 413.7 361 58.2
Psat0s137g0200 Pisum sativum HOM05D005177 ORTHO05D006175 1.6e-111 407.1 382 55.0
Dinv14445 Davidia involucrata HOM05D005177 ORTHO05D006175 4.7e-111 405.6 347 61.1
Cfa011364 Carpinus fangiana HOM05D005177 ORTHO05D006175 1.0e-110 404.4 385 54.5
MELO3C025749.2 Cucumis melo HOM05D005177 ORTHO05D006175 1.0e-110 404.4 384 54.7
Lj3g0023073 Lotus japonicus HOM05D005177 ORTHO05D006175 6.7e-110 401.7 397 52.9
FvH4_3g33260 Fragaria vesca HOM05D005177 ORTHO05D006175 1.5e-109 400.6 378 56.3
Lsat_1_v5_gn_2_50980 Lactuca sativa HOM05D005177 ORTHO05D006175 3.3e-109 399.4 403 52.9
CiPaw.13G107400 Carya illinoinensis HOM05D005177 ORTHO05D006175 5.7e-109 398.7 352 58.2
THA.LOC104814837 Tarenaya hassleriana HOM05D005177 ORTHO05D006175 6.3e-108 395.2 420 51.2
ClCG02G020960 Citrullus lanatus HOM05D005177 ORTHO05D006175 2.4e-107 393.3 408 52.5
Medtr4g060790 Medicago truncatula HOM05D005177 ORTHO05D006175 1.6e-106 390.6 384 53.1
CiPaw.13G107500 Carya illinoinensis HOM05D005177 ORTHO05D006175 4.5e-106 389.0 316 62.3
Lalb_Chr01g0004161 Lupinus albus HOM05D005177 ORTHO05D006175 1.0e-105 387.9 377 55.4
arahy.Tifrunner.gnm1.ann1.X56S8K Arachis hypogaea HOM05D005177 ORTHO05D006175 1.7e-105 387.1 413 51.1
BcaB05g22637 Brassica carinata HOM05D000280 ORTHO05D000632 2.2e-105 386.7 403 50.6
BcaC03g13978 Brassica carinata HOM05D005177 ORTHO05D006175 2.2e-105 386.7 415 50.4
RcHm_v2.0_Chr5g0060621 Rosa chinensis HOM05D005177 ORTHO05D006175 1.1e-104 384.4 393 52.7
AL8G36980 Arabidopsis lyrata HOM05D005177 ORTHO05D006175 2.5e-104 383.3 415 49.9
BraA02t05734Z Brassica rapa HOM05D005177 ORTHO05D006175 2.5e-104 383.3 413 49.6
AT5G60370 Arabidopsis thaliana HOM05D005177 ORTHO05D006175 3.2e-104 382.9 403 50.1
Hund08273 Selenicereus undatus HOM05D005177 ORTHO05D006175 4.2e-104 382.5 426 50.5
Sc06g0010530 Simmondsia chinensis HOM05D005177 ORTHO05D006175 5.5e-104 382.1 368 55.4
Haze_23912 Corylus avellana HOM05D005177 ORTHO05D006175 7.2e-104 381.7 382 54.2
arahy.Tifrunner.gnm1.ann1.Q9R44R Arachis hypogaea HOM05D005177 ORTHO05D006175 9.4e-104 381.3 414 50.2
Sp6g21970 Schrenkiella parvula HOM05D005177 ORTHO05D006175 1.2e-103 380.9 391 50.1
CiPaw.13G107200 Carya illinoinensis HOM05D005177 ORTHO05D006175 2.1e-103 380.2 414 51.2
Aa31LG1G12430 Aethionema arabicum HOM05D005177 ORTHO05D006175 6.1e-103 378.6 402 50.2
CsaV3_6G021650 Cucumis sativus L. HOM05D005177 ORTHO05D006175 6.1e-103 378.6 380 51.3
BolC2t07273H Brassica oleracea HOM05D005177 ORTHO05D006175 1.0e-102 377.9 415 49.9
Carub.0008s2107 Capsella rubella HOM05D005177 ORTHO05D006175 4.0e-102 375.9 389 50.9
Eucgr.B02471 Eucalyptus grandis HOM05D005177 ORTHO05D006175 5.2e-102 375.6 374 50.8
Ah.01g015010 Amaranthus hybridus HOM05D005177 ORTHO05D006175 6.7e-102 375.2 395 49.4
Haze_23911 Corylus avellana HOM05D005177 ORTHO05D006175 8.8e-102 374.8 378 53.4
Thhalv10013696m.g Eutrema salsugineum HOM05D005177 ORTHO05D006175 3.3e-101 372.9 402 49.0
CiPaw.13G107600 Carya illinoinensis HOM05D005177 ORTHO05D006175 2.8e-100 369.8 259 66.0
AUR62006522 Chenopodium quinoa HOM05D005177 ORTHO05D006175 3.7e-100 369.4 381 52.8
Dinv01415 Davidia involucrata HOM05D005177 ORTHO05D006175 1.6e-98 364.0 256 69.1
Lj3g0021588 Lotus japonicus HOM05D005177 ORTHO05D006175 1.0e-97 361.3 397 49.4
Sed0002828 Sechium edule HOM05D005177 ORTHO05D005441 6.5e-97 358.6 379 51.7
Os05g0123300 Oryza sativa ssp. japonica HOM05D005177 ORTHO05D006175 4.2e-96 355.9 398 47.0
Gohir.A03G161400 Gossypium hirsutum HOM05D005177 ORTHO05D006175 7.2e-96 355.1 305 60.0
EL10Ac9g22467 Beta vulgaris HOM05D005177 ORTHO05D006175 8.0e-95 351.7 397 49.1
ATR1159G017 Amborella trichopoda HOM05D005177 ORTHO05D006175 1.8e-94 350.5 400 47.5
SGA_v2.0_scaffold97G29176 Striga asiatica HOM05D005177 ORTHO05D006175 6.8e-94 348.6 415 50.1
ECA238G1817 Erigeron canadensis HOM05D000382 ORTHO05D000391 4.4e-93 345.9 387 49.9
HanXRQChr14g0433031 Helianthus annuus HOM05D005177 ORTHO05D006175 5.7e-93 345.5 368 51.9
Zm00001eb265420 Zea mays HOM05D005177 ORTHO05D006175 5.7e-93 345.5 383 47.5
SHI06048 Sapria himalayana HOM05D005177 ORTHO05D006175 2.4e-91 340.1 369 49.1
Psat6g221840 Pisum sativum HOM05D005177 ORTHO05D006175 3.5e-90 336.3 403 46.7
QL01p037225 Quercus lobata HOM05D005177 ORTHO05D006175 3.8e-89 332.8 456 43.4
CSS0008980 Camellia sinensis var. sinensis HOM05D005177 ORTHO05D006175 3.3e-88 329.7 233 66.1
Ca_11098_v3 Cicer arietinum L. HOM05D005177 ORTHO05D006175 2.1e-87 327.0 410 45.6
Phvul.007G036300 Phaseolus vulgaris HOM05D005177 ORTHO05D006175 8.0e-87 325.1 355 48.5
QL01p037240 Quercus lobata HOM05D005177 ORTHO05D006175 2.8e-84 316.6 253 60.1
Haze_23910 Corylus avellana HOM05D005177 ORTHO05D006175 3.7e-84 316.2 378 47.6
FAN21G0634 Fragaria x ananassa HOM05D005177 ORTHO05D006175 1.8e-83 313.9 376 48.4
CDE04G2914 Ceratophyllum demersum HOM05D005177 ORTHO05D006175 7.0e-83 312.0 373 48.0
VMungo0251G1016 Vigna mungo HOM05D005177 ORTHO05D006175 9.2e-83 311.6 389 46.8
C02p11760 Brassica napus HOM05D005177 ORTHO05D006175 4.7e-79 299.3 259 55.6
Mapoly0004s0234 Marchantia polymorpha HOM05D005177 ORTHO05D006175 4.7e-79 299.3 316 47.2
SMO143G0224 Selaginella moellendorffii HOM05D005177 ORTHO05D006175 8.0e-79 298.5 375 42.9
Medtr1g062090 Medicago truncatula HOM05D005177 ORTHO05D006175 4.4e-77 292.7 398 43.0
PSO339G4079 Papaver somniferum HOM05D005177 ORTHO05D006175 1.7e-76 290.8 303 49.8
TPR.G4931 Trifolium pratense HOM05D005177 ORTHO05D006175 8.3e-76 288.5 404 41.6
PSO384G3506 Papaver somniferum HOM05D005177 ORTHO05D006175 1.9e-75 287.3 305 48.5
Pp3c24_6040 Physcomitrium patens HOM05D005177 ORTHO05D006175 1.9e-75 287.3 284 48.6
Lj5g0027081 Lotus japonicus HOM05D005177 ORTHO05D006175 1.3e-73 281.2 296 49.0
CARHR274040 Cardamine hirsuta HOM05D005177 ORTHO05D006175 1.5e-72 277.7 289 51.9
Lj2C1035T4 Lonicera japonica HOM05D005177 ORTHO05D006175 6.6e-65 252.3 188 66.5
Lalb_Chr06g0165641 Lupinus albus HOM05D005177 ORTHO05D006175 2.3e-62 243.8 371 41.2
CBR_g2921 Chara braunii HOM05D005177 ORTHO05D006175 8.9e-62 241.9 275 42.9
Ca_19242_v3 Cicer arietinum L. HOM05D005177 ORTHO05D006175 1.2e-61 241.5 181 60.8
Lalb_Chr03g0027131 Lupinus albus HOM05D005177 ORTHO05D006175 9.2e-59 231.9 253 52.2
MD11G1130000 Malus domestica HOM05D005177 ORTHO05D006175 8.6e-57 225.3 178 59.0
AUR62025012 Chenopodium quinoa HOM05D005177 ORTHO05D006175 6.2e-55 219.2 183 55.2
CDE07G1541 Ceratophyllum demersum HOM05D005177 ORTHO05D006175 9.2e-51 205.3 246 53.7
HPP92_013896 Vanilla planifolia HOM05D005177 ORTHO05D006175 1.8e-46 191.0 244 48.0
Lalb_Chr03g0027121 Lupinus albus HOM05D005177 ORTHO05D006175 2.4e-43 180.6 134 61.2
Glyma.20G125100 Glycine max HOM05D005177 ORTHO05D006175 5.1e-41 172.9 203 45.8
Aqoxy230s004 Aquilegia oxysepala HOM05D000156 ORTHO05D002600 3.5e-34 150.2 112 60.7
AUR62033196 Chenopodium quinoa HOM05D005177 ORTHO05D006175 8.4e-28 129.0 101 58.4
MD12G1113200 Malus domestica HOM05D005177 ORTHO05D006175 2.5e-27 127.5 106 56.6
SalBow7G3352 Salvia bowleyana HOM05D005177 ORTHO05D006175 1.2e-26 125.2 158 46.8
MD03G1203800 Malus domestica HOM05D005177 ORTHO05D006175 2.7e-26 124.0 106 55.7
Lj2A1035T47 Lonicera japonica HOM05D005177 ORTHO05D006175 4.6e-26 123.2 168 48.8
AUR62037383 Chenopodium quinoa HOM05D005177 ORTHO05D006175 7.9e-26 122.5 101 53.5
MD02G1279000 Malus domestica HOM05D005177 ORTHO05D006175 7.9e-26 122.5 106 56.6
SalBow2G1018 Salvia bowleyana HOM05D005177 ORTHO05D006175 8.7e-25 119.0 108 54.6
CDE07G0204 Ceratophyllum demersum HOM05D005177 ORTHO05D006175 2.5e-24 117.5 89 64.0
SalBow8G4533 Salvia bowleyana HOM05D005177 ORTHO05D006175 2.1e-23 114.4 86 64.0
SEGI_18444 Sequoiadendron giganteum HOM05D005177 ORTHO05D006175 3.1e-22 110.5 77 66.2
MD11G1130200 Malus domestica HOM05D005177 ORTHO05D008128 6.5e-20 102.8 107 53.3
SEGI_09926 Sequoiadendron giganteum HOM05D005177 ORTHO05D006175 6.9e-14 82.8 115 35.7
CSS0040502 Camellia sinensis var. sinensis HOM05D005177 ORTHO05D033885 2.2e-12 77.8 153 43.8
QL01p037253 Quercus lobata HOM05D005177 ORTHO05D033885 2.5e-11 74.3 137 44.5
CSS0013492 Camellia sinensis var. sinensis HOM05D005177 ORTHO05D033885 2.7e-10 70.9 149 41.6
MD02G1245500 Malus domestica HOM05D005177 ORTHO05D006175 8.2e-07 59.3 42 66.7
AT3G57110 Arabidopsis thaliana HOM05D005177 ORTHO05D006175 1.4e-06 58.5 134 35.1


User provided reference genes

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