Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g029960 Solanum pennellii HOM05D006795 ORTHO05D008573 1.4e-112 409.5 189 100.0
Solyc11g072290.3 Solanum lycopersicum HOM05D006795 ORTHO05D008573 1.0e-110 403.3 189 97.4
CAN.G1187.5 Capsicum annuum HOM05D006795 ORTHO05D008573 1.3e-97 359.8 189 85.7
Nitab4.5_0001589g0020 Nicotiana tabacum HOM05D006795 ORTHO05D008573 2.8e-92 342.0 189 81.0
Nitab4.5_0000205g0150 Nicotiana tabacum HOM05D006795 ORTHO05D008573 1.7e-89 332.8 190 79.5
Peaxi162Scf00132g00138 Petunia axillaris HOM05D006795 ORTHO05D008573 5.0e-89 331.3 189 77.8
Dinv07998 Davidia involucrata HOM05D006795 ORTHO05D008573 1.5e-80 303.1 189 70.4
CSS0024840 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 1.5e-77 293.1 189 68.8
COL.COLO4_14197 Corchorus olitorius HOM05D006795 ORTHO05D008573 2.0e-77 292.7 189 70.4
Oeu021736.1 Olea europaea HOM05D006795 ORTHO05D008573 7.5e-77 290.8 189 67.7
Haze_13816 Corylus avellana HOM05D006795 ORTHO05D008573 9.2e-75 283.9 189 68.3
vmacro06760 Vaccinium macrocarpon HOM05D006795 ORTHO05D008573 1.2e-74 283.5 189 68.3
GSVIVG01018489001 Vitis vinifera HOM05D006795 ORTHO05D008573 1.2e-74 283.5 189 67.2
Cpa.g.sc3.258 Carica papaya HOM05D006795 ORTHO05D008573 4.5e-74 281.6 189 67.2
CANSAT21G1655 Cannabis sativa HOM05D006795 ORTHO05D008573 5.9e-74 281.2 184 69.6
Lj8A35T83 Lonicera japonica HOM05D006795 ORTHO05D008573 7.8e-74 280.8 189 67.2
TAR636G0045 Trochodendron aralioides HOM05D006795 ORTHO05D008573 7.8e-74 280.8 189 66.7
QL12p039358 Quercus lobata HOM05D006795 ORTHO05D008573 1.0e-73 280.4 188 68.6
PGR042G2278 Punica granatum HOM05D006795 ORTHO05D008573 1.3e-73 280.0 189 67.2
Actinidia03085 Actinidia chinensis HOM05D006795 ORTHO05D008573 2.9e-73 278.9 189 66.7
Lj5g0021204 Lotus japonicus HOM05D006795 ORTHO05D008573 3.8e-73 278.5 193 67.9
PGSC0003DMG400027380 Solanum tuberosum HOM05D006795 ORTHO05D008573 5.0e-73 278.1 134 91.8
Actinidia31794 Actinidia chinensis HOM05D006795 ORTHO05D008573 8.6e-73 277.3 189 66.7
Rhsim03G0172800 Rhododendron simsii HOM05D006795 ORTHO05D008573 8.6e-73 277.3 189 67.7
ECA238G4708 Erigeron canadensis HOM05D006795 ORTHO05D008573 1.9e-72 276.2 188 66.5
ClCG11G008970 Citrullus lanatus HOM05D006795 ORTHO05D008573 2.5e-72 275.8 186 68.8
Nn1g01176 Nelumbo nucifera HOM05D006795 ORTHO05D008573 3.3e-72 275.4 191 67.0
Thecc.03G163300 Theobroma cacao HOM05D006795 ORTHO05D008573 7.3e-72 274.2 192 67.7
Manes.06G139000 Manihot esculenta HOM05D006795 ORTHO05D008573 9.5e-72 273.9 189 66.7
FAN06G0634 Fragaria x ananassa HOM05D001585 ORTHO05D001677 1.2e-71 273.5 187 65.8
FAN06G3003 Fragaria x ananassa HOM05D001585 ORTHO05D001677 1.2e-71 273.5 187 65.8
Ah.13g067570 Amaranthus hybridus HOM05D006795 ORTHO05D008573 1.6e-71 273.1 191 64.9
Thhalv10014608m.g Eutrema salsugineum HOM05D006795 ORTHO05D008573 2.1e-71 272.7 185 66.5
Aa31LG3G8130 Aethionema arabicum HOM05D006795 ORTHO05D008573 3.6e-71 271.9 184 64.7
Ciclev10005807m.g Citrus clementina HOM05D006795 ORTHO05D008573 4.7e-71 271.6 191 66.5
Cc02_g03780 Coffea canephora HOM05D006795 ORTHO05D008573 4.7e-71 271.6 187 66.8
BolC2t08156H Brassica oleracea HOM05D006795 ORTHO05D008573 6.1e-71 271.2 186 66.7
BcaC03g14579 Brassica carinata HOM05D006795 ORTHO05D008573 8.0e-71 270.8 186 66.7
TWI39G0269 Tripterygium wilfordii HOM05D006795 ORTHO05D008573 8.0e-71 270.8 189 64.6
BraA02t06278Z Brassica rapa HOM05D006795 ORTHO05D008573 1.0e-70 270.4 186 66.7
AUR62035033 Chenopodium quinoa HOM05D006795 ORTHO05D008573 1.0e-70 270.4 189 66.1
C02p20240 Brassica napus HOM05D006795 ORTHO05D008573 1.4e-70 270.0 186 66.1
FvH4_7g28300 Fragaria vesca HOM05D006795 ORTHO05D008573 1.4e-70 270.0 187 65.2
Duzib068G1417 Durio zibethinus HOM05D006795 ORTHO05D008573 1.8e-70 269.6 191 64.9
Medtr1g102470 Medicago truncatula HOM05D006795 ORTHO05D008573 2.3e-70 269.2 189 66.7
Manes.06G149000 Manihot esculenta HOM05D006795 ORTHO05D008573 3.1e-70 268.9 189 65.1
A02p12140 Brassica napus HOM05D006795 ORTHO05D008573 4.0e-70 268.5 186 66.1
AUR62016086 Chenopodium quinoa HOM05D006795 ORTHO05D008573 4.0e-70 268.5 191 63.9
MD01G1187300 Malus domestica HOM05D006795 ORTHO05D008573 4.0e-70 268.5 189 65.1
MD07G1259600 Malus domestica HOM05D006795 ORTHO05D008573 4.0e-70 268.5 185 65.4
CiPaw.03G097900 Carya illinoinensis HOM05D006795 ORTHO05D008573 5.2e-70 268.1 189 66.7
Prupe.2G283700 Prunus persica HOM05D006795 ORTHO05D008573 5.2e-70 268.1 189 67.2
Hund04657 Selenicereus undatus HOM05D006795 ORTHO05D008573 5.2e-70 268.1 196 63.3
BcaB08g35519 Brassica carinata HOM05D006795 ORTHO05D008573 6.8e-70 267.7 185 64.9
arahy.Tifrunner.gnm1.ann1.939HGU Arachis hypogaea HOM05D006795 ORTHO05D008573 8.9e-70 267.3 189 65.6
RcHm_v2.0_Chr1g0375271 Rosa chinensis HOM05D006795 ORTHO05D008573 8.9e-70 267.3 190 64.7
arahy.Tifrunner.gnm1.ann1.ATT3CU Arachis hypogaea HOM05D006795 ORTHO05D008573 1.5e-69 266.5 194 66.0
FAN10G2418 Fragaria x ananassa HOM05D006795 ORTHO05D008573 1.5e-69 266.5 187 62.6
Potri.015G132300 Populus trichocarpa HOM05D006795 ORTHO05D008573 1.5e-69 266.5 189 64.6
Sc13g0008130 Simmondsia chinensis HOM05D006795 ORTHO05D008573 2.0e-69 266.2 189 67.2
FAN03G1859 Fragaria x ananassa HOM05D001585 ORTHO05D001677 3.4e-69 265.4 187 64.2
Sabra15G0145100 Salix brachista HOM05D006795 ORTHO05D008573 3.4e-69 265.4 191 64.9
Aqoxy7G00570 Aquilegia oxysepala HOM05D006795 ORTHO05D008573 5.8e-69 264.6 190 64.7
CsaV3_2G010830 Cucumis sativus L. HOM05D006795 ORTHO05D008573 9.8e-69 263.8 187 65.8
FAN03G1183 Fragaria x ananassa HOM05D001585 ORTHO05D001677 9.8e-69 263.8 187 63.6
AT5G51700 Arabidopsis thaliana HOM05D006795 ORTHO05D008573 1.7e-68 263.1 186 64.5
Glyma.10G242200 Glycine max HOM05D006795 ORTHO05D008573 1.7e-68 263.1 191 65.4
SGA_v2.0_scaffold2G01112 Striga asiatica HOM05D006795 ORTHO05D008573 2.2e-68 262.7 192 65.1
Carub.0008s1172 Capsella rubella HOM05D006795 ORTHO05D008573 3.7e-68 261.9 186 62.9
Sp6g13920 Schrenkiella parvula HOM05D006795 ORTHO05D008573 3.7e-68 261.9 187 63.1
MSTRG.119 Avicennia marina HOM05D006795 ORTHO05D008573 4.9e-68 261.5 186 63.4
BcaB05g23990 Brassica carinata HOM05D006795 ORTHO05D008573 4.9e-68 261.5 186 64.0
Os02g0535400 Oryza sativa ssp. japonica HOM05D006795 ORTHO05D008573 4.9e-68 261.5 185 63.2
THA.LOC104825075 Tarenaya hassleriana HOM05D006795 ORTHO05D008573 4.9e-68 261.5 189 64.6
AL8G25950 Arabidopsis lyrata HOM05D006795 ORTHO05D008573 8.3e-68 260.8 186 64.5
TPR.G26107 Trifolium pratense HOM05D006795 ORTHO05D008573 8.3e-68 260.8 194 63.4
Psat6g202120 Pisum sativum HOM05D006795 ORTHO05D008573 1.1e-67 260.4 193 64.8
Psat6g202920 Pisum sativum HOM05D006795 ORTHO05D008573 1.1e-67 260.4 193 64.8
Glyma.20G151900 Glycine max HOM05D006795 ORTHO05D008573 1.4e-67 260.0 191 63.9
Migut.F00416 Erythranthe guttata HOM05D006795 ORTHO05D008573 1.9e-67 259.6 186 62.4
Eucgr.A02872 Eucalyptus grandis HOM05D006795 ORTHO05D008573 5.4e-67 258.1 190 63.7
PSO782G4689 Papaver somniferum HOM05D006795 ORTHO05D008573 5.4e-67 258.1 190 63.7
A10p09570 Brassica napus HOM05D006795 ORTHO05D008573 9.2e-67 257.3 185 63.2
BraA10t43032Z Brassica rapa HOM05D006795 ORTHO05D008573 9.2e-67 257.3 185 63.2
CDE06G1038 Ceratophyllum demersum HOM05D006795 ORTHO05D008573 9.2e-67 257.3 186 64.0
Lsat_1_v5_gn_2_129741 Lactuca sativa HOM05D006795 ORTHO05D008573 9.2e-67 257.3 193 62.7
PSO478G2429 Papaver somniferum HOM05D006795 ORTHO05D008573 1.2e-66 256.9 190 63.2
CARHR264540 Cardamine hirsuta HOM05D006795 ORTHO05D008573 1.6e-66 256.5 184 64.1
Sed0014900 Sechium edule HOM05D006795 ORTHO05D008573 3.5e-66 255.4 186 63.4
Gohir.A09G178600 Gossypium hirsutum HOM05D006795 ORTHO05D008573 7.8e-66 254.2 189 63.0
Gohir.D09G174200 Gossypium hirsutum HOM05D006795 ORTHO05D008573 7.8e-66 254.2 189 63.0
Gorai.006G196200 Gossypium raimondii HOM05D006795 ORTHO05D008573 7.8e-66 254.2 189 63.0
Lalb_Chr02g0140771 Lupinus albus HOM05D006795 ORTHO05D008573 2.3e-65 252.7 189 64.0
EL10Ac3g05773 Beta vulgaris HOM05D006795 ORTHO05D008573 3.0e-65 252.3 189 63.0
unitig_0.g1164 Utricularia gibba HOM05D006795 ORTHO05D008573 3.9e-65 251.9 185 62.2
Atru.chr1.614 Acer truncatum HOM05D006795 ORTHO05D008573 1.1e-64 250.4 193 61.7
Zm00001eb242890 Zea mays HOM05D006795 ORTHO05D008573 1.9e-64 249.6 185 59.5
CSS0028605 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 3.6e-63 245.4 164 67.7
HPP92_005470 Vanilla planifolia HOM05D006795 ORTHO05D008573 6.2e-63 244.6 189 60.8
Oeu042417.2 Olea europaea HOM05D006795 ORTHO05D008573 2.3e-62 242.7 174 64.9
FAN01G1007 Fragaria x ananassa HOM05D006795 ORTHO05D008573 8.9e-62 240.7 187 59.4
SEGI_28069 Sequoiadendron giganteum HOM05D006795 ORTHO05D008573 4.1e-59 231.9 186 57.5
ATR1145G092 Amborella trichopoda HOM05D006795 ORTHO05D008573 5.4e-59 231.5 195 54.9
Mapoly0020s0061 Marchantia polymorpha HOM05D006795 ORTHO05D008573 7.0e-59 231.1 185 58.4
Pp3c14_10540 Physcomitrium patens HOM05D006795 ORTHO05D008573 7.8e-58 227.6 189 56.1
SalBow4G0392 Salvia bowleyana HOM05D006795 ORTHO05D008573 1.0e-57 227.3 165 61.8
SalBow4G1076 Salvia bowleyana HOM05D006795 ORTHO05D008573 1.0e-57 227.3 165 61.8
Ca_10834_v3 Cicer arietinum L. HOM05D006795 ORTHO05D008573 6.8e-54 214.5 161 63.4
CBR_g32001 Chara braunii HOM05D006795 ORTHO05D008573 7.5e-53 211.1 192 52.6
SMO146G0237 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 6.4e-52 208.0 183 54.6
VMungo0720G2517 Vigna mungo HOM05D006795 ORTHO05D008573 7.1e-51 204.5 165 60.0
Phvul.007G063300 Phaseolus vulgaris HOM05D006795 ORTHO05D008573 6.0e-50 201.4 145 62.8
TAR629G1442 Trochodendron aralioides HOM05D006795 ORTHO05D008573 1.4e-46 190.3 164 58.5
MCO02G265 Micromonas commoda HOM05D006795 ORTHO05D008573 1.2e-42 177.2 185 44.9
Zm00001eb181460 Zea mays HOM05D006795 ORTHO05D008573 5.4e-35 151.8 90 68.9
MELO3C008527.2 Cucumis melo HOM05D006795 ORTHO05D008573 9.3e-35 151.0 75 76.0
SMO146G0045 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 3.3e-08 62.8 162 30.2
PRCOL_00002330 Prasinoderma coloniale HOM05D006795 ORTHO05D008573 1.4e-06 57.4 61 36.1


User provided reference genes

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