Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g029530 Solanum pennellii HOM05D006711 ORTHO05D008104 1.6e-39 165.6 83 100.0
CAN.G742.33 Capsicum annuum HOM05D006711 ORTHO05D008104 1.7e-36 155.6 83 92.8
Peaxi162Scf00429g00118 Petunia axillaris HOM05D006711 ORTHO05D008104 5.3e-35 150.6 83 89.2
Nitab4.5_0004762g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 1.3e-33 146.0 83 88.0
Nitab4.5_0002792g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 6.5e-33 143.7 81 87.7
PGSC0003DMG400003004 Solanum tuberosum HOM05D006711 ORTHO05D008104 2.5e-32 141.7 128 64.1
Actinidia33966 Actinidia chinensis HOM05D006711 ORTHO05D008104 1.1e-27 126.3 78 76.9
CANSAT11G1423 Cannabis sativa HOM05D006711 ORTHO05D008104 1.4e-27 125.9 77 77.9
Migut.N03365 Erythranthe guttata HOM05D006711 ORTHO05D008104 3.1e-27 124.8 78 75.6
Hma1.2p1_0697F.1_g204840 Hydrangea macrophylla HOM05D006711 ORTHO05D008104 2.6e-26 121.7 78 73.1
SalBow6G5258 Salvia bowleyana HOM05D006711 ORTHO05D008104 2.6e-26 121.7 78 74.4
Sp5g13950 Schrenkiella parvula HOM05D006711 ORTHO05D008104 1.7e-25 119.0 77 72.7
Aa31LG11G810 Aethionema arabicum HOM05D006711 ORTHO05D008104 2.9e-25 118.2 77 74.0
Sc04g0001970 Simmondsia chinensis HOM05D006711 ORTHO05D008104 2.9e-25 118.2 80 70.0
BcaB01g00848 Brassica carinata HOM05D006711 ORTHO05D008104 3.8e-25 117.9 77 72.7
Thhalv10010870m.g Eutrema salsugineum HOM05D006711 ORTHO05D008104 3.8e-25 117.9 77 71.4
FvH4_5g05020 Fragaria vesca HOM05D006711 ORTHO05D008104 3.8e-25 117.9 77 71.4
FAN04G0211 Fragaria x ananassa HOM05D006711 ORTHO05D008104 3.8e-25 117.9 77 71.4
FAN08G2471 Fragaria x ananassa HOM05D006711 ORTHO05D008104 3.8e-25 117.9 77 71.4
FAN13G1278 Fragaria x ananassa HOM05D006711 ORTHO05D008104 3.8e-25 117.9 77 71.4
FAN18G1479 Fragaria x ananassa HOM05D006711 ORTHO05D008104 3.8e-25 117.9 77 71.4
FAN18G2156 Fragaria x ananassa HOM05D006711 ORTHO05D008104 3.8e-25 117.9 77 71.4
Sabra12G0055800 Salix brachista HOM05D006711 ORTHO05D008104 3.8e-25 117.9 77 70.1
Aa31LG4G16690 Aethionema arabicum HOM05D006711 ORTHO05D008104 5.0e-25 117.5 77 71.4
AL5G27360 Arabidopsis lyrata HOM05D006711 ORTHO05D008104 5.0e-25 117.5 77 71.4
CARHR156770 Cardamine hirsuta HOM05D006711 ORTHO05D008104 5.0e-25 117.5 77 71.4
Manes.14G068400 Manihot esculenta HOM05D006711 ORTHO05D008104 6.5e-25 117.1 77 71.4
THA.LOC104798980 Tarenaya hassleriana HOM05D000086 ORTHO05D008104 6.5e-25 117.1 77 74.0
THA.LOC104821460 Tarenaya hassleriana HOM05D006711 ORTHO05D008104 6.5e-25 117.1 77 72.7
Eucgr.K02867 Eucalyptus grandis HOM05D006711 ORTHO05D008104 8.5e-25 116.7 77 74.0
Oeu047317.1 Olea europaea HOM05D006711 ORTHO05D008104 8.5e-25 116.7 78 69.2
DCAR_011220 Daucus carota HOM05D006711 ORTHO05D008104 1.1e-24 116.3 78 70.5
PSO478G1559 Papaver somniferum HOM05D006711 ORTHO05D008104 1.1e-24 116.3 80 67.5
Sabra15G0097500 Salix brachista HOM05D006711 ORTHO05D008104 1.1e-24 116.3 77 71.4
Potri.012G078000 Populus trichocarpa HOM05D006711 ORTHO05D008104 1.5e-24 115.9 77 70.1
Potri.015G073300 Populus trichocarpa HOM05D006711 ORTHO05D008104 1.5e-24 115.9 77 70.1
GSVIVG01032507001 Vitis vinifera HOM05D006711 ORTHO05D008104 1.5e-24 115.9 76 72.4
Ah.10g035450 Amaranthus hybridus HOM05D006711 ORTHO05D008104 1.9e-24 115.5 80 68.8
BcaC07g39289 Brassica carinata HOM05D006711 ORTHO05D008104 1.9e-24 115.5 77 71.4
A06p19610 Brassica napus HOM05D006711 ORTHO05D008104 1.9e-24 115.5 77 71.4
C08p22960 Brassica napus HOM05D006711 ORTHO05D008104 1.9e-24 115.5 77 71.4
BolC8t49933H Brassica oleracea HOM05D006711 ORTHO05D008104 1.9e-24 115.5 77 71.4
BraA06t25041Z Brassica rapa HOM05D006711 ORTHO05D008104 1.9e-24 115.5 77 71.4
AUR62031000 Chenopodium quinoa HOM05D006711 ORTHO05D008104 1.9e-24 115.5 80 68.8
CsaV3_1G008300 Cucumis sativus L. HOM05D006711 ORTHO05D008104 1.9e-24 115.5 77 74.0
Oeu059193.1 Olea europaea HOM05D006711 ORTHO05D008104 1.9e-24 115.5 78 69.2
vmacro05808 Vaccinium macrocarpon HOM05D006711 ORTHO05D008104 2.5e-24 115.2 76 72.4
Cc07_g02450 Coffea canephora HOM05D006711 ORTHO05D008104 3.2e-24 114.8 76 72.4
PSO063G1690 Papaver somniferum HOM05D006711 ORTHO05D008104 3.2e-24 114.8 77 66.2
PSO832G1815 Papaver somniferum HOM05D006711 ORTHO05D008104 3.2e-24 114.8 77 66.2
Cfa019085 Carpinus fangiana HOM05D006711 ORTHO05D008104 5.5e-24 114.0 77 71.4
MD06G1177900 Malus domestica HOM05D006711 ORTHO05D008104 5.5e-24 114.0 77 71.4
MD14G1184500 Malus domestica HOM05D006711 ORTHO05D008104 5.5e-24 114.0 77 71.4
PSO017G6527 Papaver somniferum HOM05D006711 ORTHO05D008104 5.5e-24 114.0 80 67.5
Hund09419 Selenicereus undatus HOM05D006711 ORTHO05D008104 9.4e-24 113.2 80 66.2
ClCG01G014050 Citrullus lanatus HOM05D006711 ORTHO05D008104 1.2e-23 112.8 77 70.1
MELO3C002246.2 Cucumis melo HOM05D006711 ORTHO05D008104 1.2e-23 112.8 77 72.7
Gohir.D12G276600 Gossypium hirsutum HOM05D006711 ORTHO05D008104 1.2e-23 112.8 77 68.8
Medtr4g106700 Medicago truncatula HOM05D006711 ORTHO05D008104 1.2e-23 112.8 77 70.1
Thecc.03G007500 Theobroma cacao HOM05D006711 ORTHO05D008104 1.2e-23 112.8 77 68.8
EL10Ac5g10797 Beta vulgaris HOM05D006711 ORTHO05D008104 1.6e-23 112.5 80 65.0
Gohir.A12G275900 Gossypium hirsutum HOM05D006711 ORTHO05D008104 1.6e-23 112.5 77 68.8
Gorai.008G297100 Gossypium raimondii HOM05D006711 ORTHO05D008104 1.6e-23 112.5 77 68.8
Psat4g057240 Pisum sativum HOM05D006711 ORTHO05D008104 1.6e-23 112.5 77 70.1
PGR044G2080 Punica granatum HOM05D006711 ORTHO05D008104 1.6e-23 112.5 77 68.8
Ca_21901_v3 Cicer arietinum L. HOM05D006711 ORTHO05D008104 2.1e-23 112.1 77 67.5
Duzib084G0075 Durio zibethinus HOM05D006711 ORTHO05D008104 2.1e-23 112.1 77 67.5
Lj4g0001750 Lotus japonicus HOM05D006711 ORTHO05D008104 2.1e-23 112.1 77 68.8
Sed0004980 Sechium edule HOM05D006711 ORTHO05D008104 2.7e-23 111.7 77 71.4
TPR.G37552 Trifolium pratense HOM05D006711 ORTHO05D008104 3.6e-23 111.3 78 70.5
Cpa.g.sc134.10 Carica papaya HOM05D006711 ORTHO05D008104 4.7e-23 110.9 77 67.5
Aqoxy3G00948 Aquilegia oxysepala HOM05D006711 ORTHO05D008104 6.1e-23 110.5 77 70.1
arahy.Tifrunner.gnm1.ann1.5NY27E Arachis hypogaea HOM05D006711 ORTHO05D008104 6.1e-23 110.5 77 68.8
Duzib068G0631 Durio zibethinus HOM05D006711 ORTHO05D008104 6.1e-23 110.5 77 66.2
TWI15G0492 Tripterygium wilfordii HOM05D006711 ORTHO05D008104 6.1e-23 110.5 70 75.7
Atru.chr9.2428 Acer truncatum HOM05D006711 ORTHO05D008104 8.0e-23 110.2 76 69.7
COL.COLO4_24770 Corchorus olitorius HOM05D006711 ORTHO05D008104 8.0e-23 110.2 77 67.5
HPP92_010905 Vanilla planifolia HOM05D006711 ORTHO05D008104 8.0e-23 110.2 79 68.4
HPP92_010907 Vanilla planifolia HOM05D006711 ORTHO05D008104 8.0e-23 110.2 79 68.4
HanXRQChr09g0265981 Helianthus annuus HOM05D006711 ORTHO05D008104 1.0e-22 109.8 72 75.0
MBI15_g24174_MAGBIO Magnolia biondii HOM05D006711 ORTHO05D008104 1.0e-22 109.8 71 73.2
Prupe.5G177100 Prunus persica HOM05D006711 ORTHO05D008104 1.0e-22 109.8 77 67.5
Lsat_1_v5_gn_4_181601 Lactuca sativa HOM05D006711 ORTHO05D008104 2.3e-22 108.6 72 73.6
CDE10G0118 Ceratophyllum demersum HOM05D001322 ORTHO05D001301 4.0e-22 107.8 75 72.0
CiPaw.12G024900 Carya illinoinensis HOM05D006711 ORTHO05D008104 1.5e-21 105.9 89 59.6
Phvul.003G198200 Phaseolus vulgaris HOM05D006711 ORTHO05D008104 2.0e-21 105.5 69 73.9
ATR1149G012 Amborella trichopoda HOM05D006711 ORTHO05D008104 2.6e-21 105.1 71 74.6
Ciclev10023110m.g Citrus clementina HOM05D006711 ORTHO05D008104 3.3e-21 104.8 76 67.1
Glyma.05G035600 Glycine max HOM05D006711 ORTHO05D008104 4.4e-21 104.4 69 72.5
CDE10G0426 Ceratophyllum demersum HOM05D006711 ORTHO05D008104 1.3e-20 102.8 66 74.2
Oeu006591.3 Olea europaea HOM05D006711 ORTHO05D008104 1.3e-20 102.8 101 53.5
HanXRQChr12g0385511 Helianthus annuus HOM05D006711 ORTHO05D008104 2.2e-20 102.1 76 65.8
unitig_46.g17997 Utricularia gibba HOM05D006711 ORTHO05D008104 2.8e-20 101.7 98 55.1
Lalb_Chr12g0201501 Lupinus albus HOM05D006711 ORTHO05D008104 6.3e-20 100.5 67 73.1
GSVIVG01007800001 Vitis vinifera HOM05D006711 ORTHO05D008104 6.3e-20 100.5 69 66.7
AUR62008246 Chenopodium quinoa HOM05D001451 ORTHO05D008104 1.1e-19 99.8 68 72.1
Carub.0005s1414 Capsella rubella HOM05D000086 ORTHO05D008104 1.4e-19 99.4 68 67.6
Zm00001eb311470 Zea mays HOM05D006711 ORTHO05D008104 1.4e-19 99.4 71 69.0
Eucgr.J02179 Eucalyptus grandis HOM05D006711 ORTHO05D008104 5.3e-19 97.4 75 65.3
Os09g0375900 Oryza sativa ssp. japonica HOM05D006711 ORTHO05D008104 5.3e-19 97.4 67 70.1
CiPaw.11G029900 Carya illinoinensis HOM05D006711 ORTHO05D008104 7.0e-19 97.1 67 71.6
SEGI_30617 Sequoiadendron giganteum HOM05D006711 ORTHO05D008104 7.0e-19 97.1 78 62.8
Sed0016611 Sechium edule HOM05D006711 ORTHO05D008104 1.0e-17 93.2 77 63.6
CSS0024346 Camellia sinensis var. sinensis HOM05D006711 ORTHO05D008104 2.2e-17 92.0 58 75.9
RcHm_v2.0_Chr7g0194021 Rosa chinensis HOM05D006711 ORTHO05D008104 3.8e-17 91.3 52 84.6
TAR622G0690 Trochodendron aralioides HOM05D001464 ORTHO05D002836 6.5e-17 90.5 82 57.3
Haze_07479 Corylus avellana HOM05D006711 ORTHO05D008104 1.1e-16 89.7 52 82.7
Nn4g22854 Nelumbo nucifera HOM05D006711 ORTHO05D008104 4.2e-16 87.8 60 68.3
QL10p013547 Quercus lobata HOM05D006711 ORTHO05D008104 7.2e-16 87.0 52 78.8
Rhsim10G0024700 Rhododendron simsii HOM05D006711 ORTHO05D008104 1.2e-15 86.3 52 78.8
Rhsim10G0024900 Rhododendron simsii HOM05D006711 ORTHO05D008104 1.2e-15 86.3 55 78.2
Rhsim08G0056600 Rhododendron simsii HOM05D000086 ORTHO05D000983 8.0e-15 83.6 60 66.7
Mapoly0124s0028 Marchantia polymorpha HOM05D006711 ORTHO05D008104 1.7e-12 75.9 73 53.4
CBR_g49624 Chara braunii HOM05D006711 ORTHO05D008104 2.2e-12 75.5 65 58.5
AagrBONN_evm.TU.Sc2ySwM_368.1224 Anthoceros agrestis HOM05D006711 ORTHO05D008104 1.4e-11 72.8 57 66.7
ATR0820G148 Amborella trichopoda HOM05D006711 ORTHO05D008104 2.4e-11 72.0 73 56.2
Pp3c14_16830 Physcomitrium patens HOM05D006711 ORTHO05D008104 3.1e-11 71.6 69 50.7
ATR0661G003 Amborella trichopoda HOM05D006711 ORTHO05D008104 1.2e-10 69.7 68 58.8
PRCOL_00004863 Prasinoderma coloniale HOM05D006711 ORTHO05D008104 4.5e-10 67.8 71 47.9
Pp3c3_16770 Physcomitrium patens HOM05D006711 ORTHO05D008104 1.0e-09 66.6 64 56.2
HPP92_016979 Vanilla planifolia HOM05D006711 ORTHO05D008104 4.2e-08 61.2 38 76.3
Dinv35040 Davidia involucrata HOM05D006711 ORTHO05D008104 9.4e-08 60.1 39 74.4
Solyc11g071860.2 Solanum lycopersicum HOM05D006711 ORTHO05D008104 4.7e-07 57.8 26 100.0
Nn3g16941 Nelumbo nucifera HOM05D006711 ORTHO05D008104 2.3e-06 55.5 51 52.9
SHI34267 Sapria himalayana HOM05D006711 ORTHO05D008104 4.0e-06 54.7 34 79.4


User provided reference genes

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