Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g029380 Solanum pennellii HOM05D007375 ORTHO05D009293 5.2e-79 297.7 159 100.0
Solyc11g071710.2 Solanum lycopersicum HOM05D007375 ORTHO05D009293 1.7e-77 292.7 159 98.7
PGSC0003DMG401003010 Solanum tuberosum HOM05D007375 ORTHO05D009293 7.5e-70 267.3 167 90.4
Nitab4.5_0007815g0030 Nicotiana tabacum HOM05D007375 ORTHO05D009293 5.4e-60 234.6 169 80.5
CAN.G742.2 Capsicum annuum HOM05D007375 ORTHO05D009293 5.9e-59 231.1 161 85.1
Nitab4.5_0002498g0050 Nicotiana tabacum HOM05D007375 ORTHO05D009293 2.5e-57 225.7 170 78.2
Peaxi162Scf00259g00119 Petunia axillaris HOM05D007375 ORTHO05D009293 7.2e-57 224.2 160 80.6
Cc01_g08020 Coffea canephora HOM05D007375 ORTHO05D009293 1.5e-41 173.3 170 64.7
Actinidia22459 Actinidia chinensis HOM05D007375 ORTHO05D009293 1.5e-38 163.3 161 67.1
GSVIVG01037526001 Vitis vinifera HOM05D007375 ORTHO05D009293 4.1e-36 155.2 158 67.1
CiPaw.13G125500 Carya illinoinensis HOM05D007375 ORTHO05D009293 4.6e-35 151.8 162 64.8
Rhsim01G0198300 Rhododendron simsii HOM05D007375 ORTHO05D009293 3.0e-34 149.1 155 61.3
PSO339G5659 Papaver somniferum HOM05D007375 ORTHO05D009293 5.1e-34 148.3 168 58.9
PSO384G3190 Papaver somniferum HOM05D007375 ORTHO05D009293 5.1e-34 148.3 168 58.9
vmacro14306 Vaccinium macrocarpon HOM05D007375 ORTHO05D009293 5.1e-34 148.3 150 60.7
Manes.04G063400 Manihot esculenta HOM05D007375 ORTHO05D009293 8.6e-34 147.5 166 60.2
Migut.N02430 Erythranthe guttata HOM05D007375 ORTHO05D009293 1.5e-33 146.7 130 67.7
Duzib170G0509 Durio zibethinus HOM05D007375 ORTHO05D009293 1.9e-33 146.4 123 70.7
Gohir.A07G113900 Gossypium hirsutum HOM05D007375 ORTHO05D009293 1.9e-33 146.4 160 65.6
Atru.chr3.3047 Acer truncatum HOM05D007375 ORTHO05D009293 2.5e-33 146.0 164 61.0
Atru.chr3.3056 Acer truncatum HOM05D007375 ORTHO05D009293 2.5e-33 146.0 164 61.0
Lj2E833T0 Lonicera japonica HOM05D007375 ORTHO05D009293 2.5e-33 146.0 172 54.7
MD11G1177000 Malus domestica HOM05D007375 ORTHO05D009293 4.3e-33 145.2 95 88.4
CSS0023504 Camellia sinensis var. sinensis HOM05D007375 ORTHO05D009293 5.6e-33 144.8 171 58.5
MSTRG.18802 Avicennia marina HOM05D007375 ORTHO05D009293 7.3e-33 144.4 151 62.3
Gohir.D07G117600 Gossypium hirsutum HOM05D007375 ORTHO05D009293 7.3e-33 144.4 160 65.0
Gorai.001G126500 Gossypium raimondii HOM05D007375 ORTHO05D009293 7.3e-33 144.4 160 65.0
TAR623G0701 Trochodendron aralioides HOM05D007375 ORTHO05D009293 7.3e-33 144.4 163 60.7
Duzib168G1424 Durio zibethinus HOM05D007375 ORTHO05D009293 1.2e-32 143.7 160 65.0
Hma1.2p1_1811F.1_g303540 Hydrangea macrophylla HOM05D007375 ORTHO05D009293 1.6e-32 143.3 102 73.5
Thecc.09G269700 Theobroma cacao HOM05D007375 ORTHO05D009293 1.6e-32 143.3 163 62.6
MD03G1161000 Malus domestica HOM05D007375 ORTHO05D009293 3.6e-32 142.1 95 86.3
FAN21G2595 Fragaria x ananassa HOM05D007375 ORTHO05D009293 6.2e-32 141.4 130 67.7
ECA233G1923 Erigeron canadensis HOM05D000870 ORTHO05D000715 8.1e-32 141.0 124 64.5
FvH4_3g26920 Fragaria vesca HOM05D007375 ORTHO05D009293 1.8e-31 139.8 130 67.7
Psat2g023920 Pisum sativum HOM05D007375 ORTHO05D009293 3.1e-31 139.0 170 61.2
HanXRQChr13g0404191 Helianthus annuus HOM05D007375 ORTHO05D009293 4.0e-31 138.7 143 57.3
Nn6g33246 Nelumbo nucifera HOM05D007375 ORTHO05D009293 5.2e-31 138.3 96 80.2
Lsat_1_v5_gn_6_49101 Lactuca sativa HOM05D007375 ORTHO05D009293 8.9e-31 137.5 160 59.4
Cfa010224 Carpinus fangiana HOM05D007375 ORTHO05D009293 1.2e-30 137.1 75 86.7
FAN16G0622 Fragaria x ananassa HOM05D007375 ORTHO05D009293 2.0e-30 136.3 142 57.7
QL01p018876 Quercus lobata HOM05D007375 ORTHO05D009293 2.0e-30 136.3 99 80.8
CANSAT54G0888 Cannabis sativa HOM05D007375 ORTHO05D009293 2.6e-30 136.0 95 82.1
Sabra09G0122000 Salix brachista HOM05D007375 ORTHO05D009293 3.4e-30 135.6 164 54.9
Potri.009G155700 Populus trichocarpa HOM05D007375 ORTHO05D009293 4.4e-30 135.2 164 53.7
RcHm_v2.0_Chr5g0049271 Rosa chinensis HOM05D007375 ORTHO05D009293 4.4e-30 135.2 162 59.9
CsaV3_1G004520 Cucumis sativus L. HOM05D007375 ORTHO05D009293 1.3e-29 133.7 96 77.1
ClCG06G014160 Citrullus lanatus HOM05D007375 ORTHO05D009293 1.7e-29 133.3 96 78.1
MELO3C017379.2 Cucumis melo HOM05D007375 ORTHO05D009293 1.7e-29 133.3 96 77.1
EL10Ac7g16260 Beta vulgaris HOM05D007375 ORTHO05D009293 2.2e-29 132.9 95 77.9
FAN11G1199 Fragaria x ananassa HOM05D007375 ORTHO05D009293 2.2e-29 132.9 109 65.1
Medtr5g086670 Medicago truncatula HOM05D007375 ORTHO05D009293 1.9e-28 129.8 169 57.4
FAN25G3479 Fragaria x ananassa HOM05D000507 ORTHO05D000416 3.2e-28 129.0 143 56.6
AUR62020198 Chenopodium quinoa HOM05D007375 ORTHO05D009293 4.1e-28 128.6 86 79.1
Phvul.008G210600 Phaseolus vulgaris HOM05D007375 ORTHO05D009293 4.1e-28 128.6 151 58.9
Sc21g0006670 Simmondsia chinensis HOM05D007375 ORTHO05D009293 4.1e-28 128.6 156 51.3
LjContig00564g0003226 Lotus japonicus HOM05D007375 ORTHO05D009293 2.7e-27 125.9 177 54.2
Lalb_Chr10g0105741 Lupinus albus HOM05D007375 ORTHO05D009293 2.7e-27 125.9 136 62.5
Sed0019994 Sechium edule HOM05D007375 ORTHO05D009293 6.0e-27 124.8 161 52.2
ATR0697G291 Amborella trichopoda HOM05D007375 ORTHO05D009293 1.0e-26 124.0 93 76.3
Glyma.02G271400 Glycine max HOM05D007375 ORTHO05D009293 1.7e-26 123.2 159 56.0
CARHR152710 Cardamine hirsuta HOM05D007375 ORTHO05D009293 2.3e-26 122.9 99 75.8
CDE07G1152 Ceratophyllum demersum HOM05D007375 ORTHO05D009293 2.3e-26 122.9 163 54.6
Aa31LG2G17160 Aethionema arabicum HOM05D007375 ORTHO05D009293 3.3e-25 119.0 98 71.4
Ciclev10029424m.g Citrus clementina HOM05D007375 ORTHO05D009293 3.3e-25 119.0 140 54.3
BcaC01g02084 Brassica carinata HOM05D007375 ORTHO05D009293 4.3e-25 118.6 98 72.4
A06p22290 Brassica napus HOM05D007375 ORTHO05D009293 4.3e-25 118.6 98 72.4
C03p68750 Brassica napus HOM05D007375 ORTHO05D009293 4.3e-25 118.6 98 72.4
BolC3t19129H Brassica oleracea HOM05D007375 ORTHO05D009293 4.3e-25 118.6 98 72.4
BraA06t25313Z Brassica rapa HOM05D007375 ORTHO05D009293 4.3e-25 118.6 98 72.4
VMungo0647G0066 Vigna mungo HOM05D007375 ORTHO05D009293 5.6e-25 118.2 149 55.0
AL5G22060 Arabidopsis lyrata HOM05D007375 ORTHO05D009293 9.6e-25 117.5 100 70.0
AT3G44020 Arabidopsis thaliana HOM05D007375 ORTHO05D009293 1.2e-24 117.1 100 71.0
Thhalv10021645m.g Eutrema salsugineum HOM05D007375 ORTHO05D009293 1.2e-24 117.1 99 68.7
Sp5g17280 Schrenkiella parvula HOM05D007375 ORTHO05D009293 1.6e-24 116.7 98 70.4
BcaB01g01208 Brassica carinata HOM05D007375 ORTHO05D009293 2.1e-24 116.3 98 71.4
arahy.Tifrunner.gnm1.ann1.MUTN5S Arachis hypogaea HOM05D007375 ORTHO05D009293 3.6e-24 115.5 96 76.0
arahy.Tifrunner.gnm1.ann1.R1KXAM Arachis hypogaea HOM05D007375 ORTHO05D009293 3.6e-24 115.5 96 76.0
Os01g0930000 Oryza sativa ssp. japonica HOM05D007375 ORTHO05D009293 8.1e-24 114.4 84 61.9
HPP92_000979 Vanilla planifolia HOM05D007375 ORTHO05D009293 8.9e-23 110.9 83 73.5
Zm00001eb370040 Zea mays HOM05D007375 ORTHO05D009293 8.9e-23 110.9 148 46.6
SEGI_05685 Sequoiadendron giganteum HOM05D007375 ORTHO05D009293 3.4e-22 109.0 93 62.4
Carub.0005s0977 Capsella rubella HOM05D007375 ORTHO05D009293 1.3e-21 107.1 157 52.9
Hund18815 Selenicereus undatus HOM05D007375 ORTHO05D009293 1.3e-21 107.1 168 40.5
Mapoly0036s0048 Marchantia polymorpha HOM05D007375 ORTHO05D009293 6.4e-21 104.8 96 66.7
Actinidia06350 Actinidia chinensis HOM05D007375 ORTHO05D009293 1.6e-19 100.1 117 56.4
AagrBONN_evm.TU.Sc2ySwM_362.1659 Anthoceros agrestis HOM05D007375 ORTHO05D009293 2.7e-19 99.4 87 56.3
unitig_22.g6168 Utricularia gibba HOM05D007375 ORTHO05D009293 6.6e-18 94.7 163 50.3
Pp3c7_23060 Physcomitrium patens HOM05D007375 ORTHO05D009293 8.7e-18 94.4 95 61.1
Pp3c11_5080 Physcomitrium patens HOM05D007375 ORTHO05D009293 1.1e-17 94.0 95 61.1
SGA_v2.0_scaffold7G04014 Striga asiatica HOM05D007375 ORTHO05D009293 4.3e-17 92.0 133 47.4
Haze_23611 Corylus avellana HOM05D007375 ORTHO05D009293 2.8e-16 89.4 107 56.1
Oeu048815.1 Olea europaea HOM05D007375 ORTHO05D009293 2.8e-16 89.4 114 50.9
Eucgr.J00596 Eucalyptus grandis HOM05D007375 ORTHO05D009293 3.4e-14 82.4 38 86.8
DCAR_012259 Daucus carota HOM05D007375 ORTHO05D009293 7.1e-12 74.7 106 49.1
Glyma.14G019800 Glycine max HOM05D007375 ORTHO05D009293 4.6e-11 72.0 50 70.0
Aa31LG4G13610 Aethionema arabicum HOM05D007375 ORTHO05D009293 6.6e-10 68.2 113 44.2
Dinv18872 Davidia involucrata HOM05D007375 ORTHO05D009293 5.6e-09 65.1 36 86.1
Prupe.6G149200 Prunus persica HOM05D007375 ORTHO05D009293 2.1e-08 63.2 105 53.3


User provided reference genes

Program Settings