Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g028140 Solanum pennellii HOM05D005728 ORTHO05D005733 2.9e-73 278.5 142 100.0
Solyc11g069420.2 Solanum lycopersicum HOM05D005728 ORTHO05D005733 7.9e-71 270.4 140 97.1
PGSC0003DMG400008077 Solanum tuberosum HOM05D005728 ORTHO05D005733 5.8e-66 254.2 142 91.5
Nitab4.5_0000650g0250 Nicotiana tabacum HOM05D005728 ORTHO05D005733 2.7e-47 192.2 143 69.2
Nitab4.5_0012712g0010 Nicotiana tabacum HOM05D005728 ORTHO05D005733 1.5e-45 186.4 143 69.9
Peaxi162Scf00270g00082 Petunia axillaris HOM05D005728 ORTHO05D005733 5.9e-42 174.5 137 69.3
Nitab4.5_0000106g0140 Nicotiana tabacum HOM05D005728 ORTHO05D005733 1.1e-27 127.1 145 52.4
Peaxi162Scf00101g00083 Petunia axillaris HOM05D005728 ORTHO05D005733 1.5e-24 116.7 141 50.4
Hma1.2p1_0058F.1_g032530 Hydrangea macrophylla HOM05D005728 ORTHO05D005733 2.6e-21 105.9 137 43.8
Rhsim01G0216600 Rhododendron simsii HOM05D005728 ORTHO05D005733 2.6e-21 105.9 137 44.5
Nitab4.5_0000196g0120 Nicotiana tabacum HOM05D005728 ORTHO05D005733 3.4e-21 105.5 144 46.5
QL01p022229 Quercus lobata HOM05D005728 ORTHO05D005733 4.4e-21 105.1 135 42.2
Phvul.005G135400 Phaseolus vulgaris HOM05D005728 ORTHO05D005733 2.8e-20 102.4 128 45.3
Cc01_g11120 Coffea canephora HOM05D005728 ORTHO05D005733 3.7e-20 102.1 135 43.0
CSS0032457 Camellia sinensis var. sinensis HOM05D005728 ORTHO05D005733 4.8e-20 101.7 130 43.1
CiPaw.13G113100 Carya illinoinensis HOM05D005728 ORTHO05D005733 1.4e-19 100.1 138 42.8
Potri.004G211000 Populus trichocarpa HOM05D005728 ORTHO05D005733 1.4e-19 100.1 128 41.4
Duzib168G0076 Durio zibethinus HOM05D005728 ORTHO05D005733 2.4e-19 99.4 136 40.4
VMungo1080G1182 Vigna mungo HOM05D005728 ORTHO05D005733 2.4e-19 99.4 129 43.4
MD03G1117800 Malus domestica HOM05D005728 ORTHO05D005733 4.1e-19 98.6 130 42.3
Manes.04G021300 Manihot esculenta HOM05D005728 ORTHO05D005733 7.0e-19 97.8 134 39.6
Sed0004216 Sechium edule HOM05D005728 ORTHO05D005733 9.1e-19 97.4 137 42.3
Thecc.09G340800 Theobroma cacao HOM05D005728 ORTHO05D005733 9.1e-19 97.4 138 39.9
Duzib150G0774 Durio zibethinus HOM05D005728 ORTHO05D005733 1.2e-18 97.1 136 39.0
Glyma.12G172600 Glycine max HOM05D005728 ORTHO05D005733 1.2e-18 97.1 128 43.0
HanXRQChr01g0016901 Helianthus annuus HOM05D005728 ORTHO05D005733 1.6e-18 96.7 116 44.0
Aqoxy1G01237 Aquilegia oxysepala HOM05D005728 ORTHO05D005733 2.7e-18 95.9 136 40.4
CANSAT54G0421 Cannabis sativa HOM05D005728 ORTHO05D005733 2.7e-18 95.9 130 42.3
Psat5g279440 Pisum sativum HOM05D005728 ORTHO05D005733 3.5e-18 95.5 114 44.7
MELO3C020692.2 Cucumis melo HOM05D005728 ORTHO05D005733 5.9e-18 94.7 139 41.7
ECA248G1213 Erigeron canadensis HOM05D005728 ORTHO05D005733 5.9e-18 94.7 133 39.8
FAN21G3175 Fragaria x ananassa HOM05D005728 ORTHO05D005733 5.9e-18 94.7 130 43.8
Atru.chr3.3629 Acer truncatum HOM05D005728 ORTHO05D005733 1.3e-17 93.6 125 42.4
arahy.Tifrunner.gnm1.ann1.X5FS8C Arachis hypogaea HOM05D005728 ORTHO05D005733 1.3e-17 93.6 130 40.8
FvH4_3g32270 Fragaria vesca HOM05D005728 ORTHO05D005733 1.3e-17 93.6 130 43.8
FAN11G0683 Fragaria x ananassa HOM05D005728 ORTHO05D005733 1.3e-17 93.6 130 43.8
Glyma.12G067500 Glycine max HOM05D005728 ORTHO05D005733 1.7e-17 93.2 128 38.3
FAN16G2914 Fragaria x ananassa HOM05D005728 ORTHO05D005733 2.9e-17 92.4 130 43.1
PGR102G3095 Punica granatum HOM05D005728 ORTHO05D005733 3.8e-17 92.0 121 39.7
Haze_23825 Corylus avellana HOM05D005728 ORTHO05D005733 5.0e-17 91.7 138 39.1
RcHm_v2.0_Chr5g0059071 Rosa chinensis HOM05D005728 ORTHO05D005733 5.0e-17 91.7 117 44.4
FAN25G2087 Fragaria x ananassa HOM05D005728 ORTHO05D005733 8.6e-17 90.9 130 42.3
TPR.G11537 Trifolium pratense HOM05D005728 ORTHO05D005733 8.6e-17 90.9 124 42.7
Glyma.13G326000 Glycine max HOM05D005728 ORTHO05D005733 1.1e-16 90.5 127 40.9
Eucgr.B02498 Eucalyptus grandis HOM05D005728 ORTHO05D005733 1.5e-16 90.1 138 39.9
Gohir.D05G102800 Gossypium hirsutum HOM05D005728 ORTHO05D005733 1.9e-16 89.7 138 39.1
Gorai.009G107100 Gossypium raimondii HOM05D005728 ORTHO05D005733 1.9e-16 89.7 138 39.1
Medtr2g094210 Medicago truncatula HOM05D005728 ORTHO05D005733 1.9e-16 89.7 124 42.7
Gohir.A05G103100 Gossypium hirsutum HOM05D005728 ORTHO05D005733 2.5e-16 89.4 138 39.1
Phvul.011G079200 Phaseolus vulgaris HOM05D005728 ORTHO05D005733 3.3e-16 89.0 128 36.7
Potri.009G013800 Populus trichocarpa HOM05D005728 ORTHO05D005733 3.3e-16 89.0 136 40.4
Ciclev10029550m.g Citrus clementina HOM05D005728 ORTHO05D005733 5.5e-16 88.2 133 36.1
TAR629G0455 Trochodendron aralioides HOM05D005728 ORTHO05D005733 5.5e-16 88.2 131 39.7
Ca_01413_v3 Cicer arietinum L. HOM05D005728 ORTHO05D005733 7.2e-16 87.8 139 39.6
Glyma.11G146600 Glycine max HOM05D005728 ORTHO05D005733 7.2e-16 87.8 132 38.6
CsaV3_1G033730 Cucumis sativus L. HOM05D005728 ORTHO05D005733 9.5e-16 87.4 139 39.6
Manes.11G145200 Manihot esculenta HOM05D005728 ORTHO05D005733 9.5e-16 87.4 116 44.8
VMungo0403G0001 Vigna mungo HOM05D005728 ORTHO05D005733 9.5e-16 87.4 126 38.1
Nn2g10793 Nelumbo nucifera HOM05D005728 ORTHO05D005733 1.6e-15 86.7 128 38.3
Prupe.6G101500 Prunus persica HOM05D005728 ORTHO05D005733 1.6e-15 86.7 136 36.8
Sed0003209 Sechium edule HOM05D005728 ORTHO05D005733 1.6e-15 86.7 134 38.8
TPR.G15560 Trifolium pratense HOM05D005728 ORTHO05D005733 1.6e-15 86.7 126 39.7
Cfa011317 Carpinus fangiana HOM05D005728 ORTHO05D005733 2.1e-15 86.3 138 39.1
TWI31G0058 Tripterygium wilfordii HOM05D005728 ORTHO05D005733 2.8e-15 85.9 140 35.7
PSO063G1604 Papaver somniferum HOM05D005728 ORTHO05D005733 4.7e-15 85.1 131 41.2
Rhsim01G0216400 Rhododendron simsii HOM05D005728 ORTHO05D005733 4.7e-15 85.1 136 40.4
Lsat_1_v5_gn_1_65300 Lactuca sativa HOM05D005728 ORTHO05D005733 6.1e-15 84.7 123 39.8
Medtr4g059310 Medicago truncatula HOM05D005728 ORTHO05D005733 8.0e-15 84.3 127 39.4
CAN.G1001.28 Capsicum annuum HOM05D003943 ORTHO05D005733 1.0e-14 84.0 130 45.4
Lalb_Chr14g0374671 Lupinus albus HOM05D005728 ORTHO05D005733 1.4e-14 83.6 127 37.8
Oeu059090.1 Olea europaea HOM05D005728 ORTHO05D005733 1.4e-14 83.6 139 38.1
PSO339G2100 Papaver somniferum HOM05D005728 ORTHO05D005733 1.4e-14 83.6 131 40.5
Gohir.D08G215300 Gossypium hirsutum HOM05D005728 ORTHO05D005733 1.8e-14 83.2 133 38.3
Gorai.004G228900 Gossypium raimondii HOM05D005728 ORTHO05D005733 2.3e-14 82.8 133 37.6
RhsimUnG0058600 Rhododendron simsii HOM05D005728 ORTHO05D005733 2.3e-14 82.8 112 44.6
MD11G1136100 Malus domestica HOM05D005728 ORTHO05D005733 5.2e-14 81.6 135 36.3
Gohir.A08G197900 Gossypium hirsutum HOM05D005728 ORTHO05D005733 6.8e-14 81.3 133 36.8
Sabra04G0142500 Salix brachista HOM05D005728 ORTHO05D005733 6.8e-14 81.3 117 37.6
THA.LOC104800607 Tarenaya hassleriana HOM05D005728 ORTHO05D005733 6.8e-14 81.3 132 37.1
Lj3g0009869 Lotus japonicus HOM05D005728 ORTHO05D005733 8.9e-14 80.9 122 36.9
ECA238G1730 Erigeron canadensis HOM05D005728 ORTHO05D005733 1.5e-13 80.1 132 40.2
TWI79G1513 Tripterygium wilfordii HOM05D005728 ORTHO05D005733 1.5e-13 80.1 140 35.7
Lalb_Chr19g0137271 Lupinus albus HOM05D005728 ORTHO05D005733 2.6e-13 79.3 130 40.0
Duzib170G0319 Durio zibethinus HOM05D005728 ORTHO05D005733 4.4e-13 78.6 124 37.9
MSTRG.17803 Avicennia marina HOM05D005728 ORTHO05D005733 7.5e-13 77.8 131 40.5
AUR62024979 Chenopodium quinoa HOM05D005728 ORTHO05D005733 1.7e-12 76.6 137 36.5
DCAR_018811 Daucus carota HOM05D005728 ORTHO05D005733 1.7e-12 76.6 123 37.4
Psat7g225080 Pisum sativum HOM05D005728 ORTHO05D005733 1.7e-12 76.6 127 38.6
Gohir.D03G134400 Gossypium hirsutum HOM05D005728 ORTHO05D005733 2.2e-12 76.3 137 36.5
EL10Ac9g22516 Beta vulgaris HOM05D005728 ORTHO05D005733 2.8e-12 75.9 134 33.6
Sabra09G0007800 Salix brachista HOM05D005728 ORTHO05D005733 2.8e-12 75.9 117 40.2
SalBow3G4069 Salvia bowleyana HOM05D005728 ORTHO05D005733 4.9e-12 75.1 133 39.1
A07p18980 Brassica napus HOM05D005728 ORTHO05D005733 6.3e-12 74.7 117 42.7
BraA07t29603Z Brassica rapa HOM05D005728 ORTHO05D005733 6.3e-12 74.7 117 42.7
Ca_19255_v3 Cicer arietinum L. HOM05D005728 ORTHO05D005733 6.3e-12 74.7 128 33.6
Ah.01g002910 Amaranthus hybridus HOM05D005728 ORTHO05D005733 1.1e-11 73.9 137 33.6
Cpa.g.sc216.7 Carica papaya HOM05D005728 ORTHO05D005733 1.1e-11 73.9 136 35.3
Carub.0004s0935 Capsella rubella HOM05D005728 ORTHO05D005733 1.4e-11 73.6 118 41.5
SGA_v2.0_scaffold2G00890 Striga asiatica HOM05D005728 ORTHO05D005733 1.4e-11 73.6 144 34.7
Gohir.A03G033900 Gossypium hirsutum HOM05D005728 ORTHO05D005733 2.4e-11 72.8 137 35.8
AUR62039639 Chenopodium quinoa HOM05D005728 ORTHO05D005733 9.2e-11 70.9 138 37.0
Hma1.2p1_2468F.1_g322665 Hydrangea macrophylla HOM05D005728 ORTHO05D005733 3.5e-10 68.9 121 42.1
BolC4t23791H Brassica oleracea HOM05D005728 ORTHO05D005733 4.5e-10 68.6 117 40.2
Sc15g0002200 Simmondsia chinensis HOM05D005728 ORTHO05D005733 4.5e-10 68.6 116 36.2
C04p22970 Brassica napus HOM05D005728 ORTHO05D005733 5.9e-10 68.2 117 40.2
Migut.N02604 Erythranthe guttata HOM05D005728 ORTHO05D005733 5.9e-10 68.2 140 35.0
Thhalv10017443m.g Eutrema salsugineum HOM05D005728 ORTHO05D005733 7.8e-10 67.8 119 37.0
BcaB06g28212 Brassica carinata HOM05D005728 ORTHO05D005733 1.3e-09 67.0 117 38.5
Hma1.2p1_0055F.1_g031560 Hydrangea macrophylla HOM05D005728 ORTHO05D005733 1.7e-09 66.6 121 41.3
BcaC02g08173 Brassica carinata HOM05D005728 ORTHO05D005733 2.9e-09 65.9 117 38.5
C04p57650 Brassica napus HOM05D005728 ORTHO05D005733 2.9e-09 65.9 117 38.5
SalBow3G1069 Salvia bowleyana HOM05D005728 ORTHO05D005733 2.9e-09 65.9 105 41.0
BolC4t27283H Brassica oleracea HOM05D005728 ORTHO05D005733 3.8e-09 65.5 117 37.6
MBI07_g19310_MAGBIO Magnolia biondii HOM05D005728 ORTHO05D005733 5.0e-09 65.1 145 33.1
AT2G28410 Arabidopsis thaliana HOM05D005728 ORTHO05D005733 6.6e-09 64.7 117 40.2
CARHR121360 Cardamine hirsuta HOM05D005728 ORTHO05D005733 8.6e-09 64.3 117 37.6
A04p21550 Brassica napus HOM05D005728 ORTHO05D005733 1.1e-08 63.9 114 36.0
BraA04t17719Z Brassica rapa HOM05D005728 ORTHO05D005733 1.1e-08 63.9 114 36.0
Oeu002871.1 Olea europaea HOM05D005728 ORTHO05D005733 2.5e-08 62.8 121 39.7
arahy.Tifrunner.gnm1.ann1.5L1A31 Arachis hypogaea HOM05D005728 ORTHO05D005733 3.3e-08 62.4 130 30.8
Lj3g0014252 Lotus japonicus HOM05D005728 ORTHO05D005733 7.3e-08 61.2 108 38.0
AL4G21610 Arabidopsis lyrata HOM05D005728 ORTHO05D005733 1.2e-07 60.5 114 36.0
Sp4g11230 Schrenkiella parvula HOM05D005728 ORTHO05D005733 2.1e-07 59.7 120 33.3
CiPaw.14G080700 Carya illinoinensis HOM05D005728 ORTHO05D005733 4.7e-07 58.5 113 37.2
MBI10_g13404_MAGBIO Magnolia biondii HOM05D005728 ORTHO05D005733 4.7e-07 58.5 153 33.3
Aa31LG5G7800 Aethionema arabicum HOM05D005728 ORTHO05D005733 8.0e-07 57.8 110 35.5
Ah.01g014340 Amaranthus hybridus HOM05D005728 ORTHO05D005733 4.0e-06 55.5 135 32.6


User provided reference genes

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