Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g027840 Solanum pennellii HOM05D023935 ORTHO05D009725 7.5e-46 186.8 93 100.0
Solyc11g069115.1 Solanum lycopersicum HOM05D023935 ORTHO05D009725 2.7e-43 178.3 93 95.7
Solyc11g069110.2 Solanum lycopersicum HOM05D023935 ORTHO05D009725 4.6e-43 177.6 93 95.7
PGSC0003DMG400008069 Solanum tuberosum HOM05D023935 ORTHO05D009725 1.0e-42 176.4 93 93.5
Peaxi162Scf00351g00317 Petunia axillaris HOM05D023935 ORTHO05D009725 4.4e-22 107.8 93 66.7
CSS0010599 Camellia sinensis var. sinensis HOM05D007887 ORTHO05D009725 1.3e-13 79.7 95 52.6
CSS0013187 Camellia sinensis var. sinensis HOM05D007887 ORTHO05D009725 1.3e-13 79.7 95 52.6
Actinidia24082 Actinidia chinensis HOM05D007887 ORTHO05D009725 1.7e-10 69.3 95 52.6
Glyma.11G153796 Glycine max HOM05D007887 ORTHO05D009725 1.3e-08 63.2 102 45.1
Thecc.09G259300 Theobroma cacao HOM05D007887 ORTHO05D009725 3.6e-08 61.6 97 40.2
CiPaw.13G108000 Carya illinoinensis HOM05D007887 ORTHO05D009725 4.8e-08 61.2 99 40.4
MD03G1112500 Malus domestica HOM05D007887 ORTHO05D009725 6.2e-08 60.8 97 45.4
Glyma.12G071500 Glycine max HOM05D007887 ORTHO05D009725 1.8e-07 59.3 93 46.2
Prupe.6G095800 Prunus persica HOM05D007887 ORTHO05D009725 4.0e-07 58.2 99 46.5
TAR633G0435 Trochodendron aralioides HOM05D007887 ORTHO05D009725 4.0e-07 58.2 91 41.8
Manes.04G024800 Manihot esculenta HOM05D007887 ORTHO05D009725 5.3e-07 57.8 98 46.9
Hma1.2p1_0071F.1_g038090 Hydrangea macrophylla HOM05D007887 ORTHO05D009725 9.0e-07 57.0 87 40.2
Lalb_Chr19g0137421 Lupinus albus HOM05D007887 ORTHO05D009725 1.2e-06 56.6 93 40.9
MD11G1131400 Malus domestica HOM05D007887 ORTHO05D009725 1.5e-06 56.2 99 44.4
Cc01_g11470 Coffea canephora HOM05D007887 ORTHO05D009725 2.0e-06 55.8 112 41.1
Eucgr.J00947 Eucalyptus grandis HOM05D007887 ORTHO05D009725 2.6e-06 55.5 44 54.5
arahy.Tifrunner.gnm1.ann1.VU6S4B Arachis hypogaea HOM05D007887 ORTHO05D009725 3.4e-06 55.1 71 40.8
Aa31LG1G12450 Aethionema arabicum HOM05D007887 ORTHO05D009725 4.4e-06 54.7 88 50.0
arahy.Tifrunner.gnm1.ann1.5EA918 Arachis hypogaea HOM05D007887 ORTHO05D009725 4.4e-06 54.7 60 46.7
arahy.Tifrunner.gnm1.ann1.ZKT7Q5 Arachis hypogaea HOM05D007887 ORTHO05D009725 4.4e-06 54.7 60 48.3
FvH4_3g33040 Fragaria vesca HOM05D007887 ORTHO05D009725 4.4e-06 54.7 98 44.9
FAN11G2401 Fragaria x ananassa HOM05D007887 ORTHO05D009725 4.4e-06 54.7 98 44.9
TPR.G36408 Trifolium pratense HOM05D007887 ORTHO05D009725 4.4e-06 54.7 88 39.8
FAN16G3357 Fragaria x ananassa HOM05D007887 ORTHO05D009725 5.8e-06 54.3 98 44.9
FAN25G1511 Fragaria x ananassa HOM05D007887 ORTHO05D009725 5.8e-06 54.3 99 44.4
Manes.11G141900 Manihot esculenta HOM05D007887 ORTHO05D009725 5.8e-06 54.3 95 42.1
Psat7g222640 Pisum sativum HOM05D007887 ORTHO05D009725 5.8e-06 54.3 40 60.0
DCAR_017079 Daucus carota HOM05D007887 ORTHO05D009725 9.9e-06 53.5 47 53.2


User provided reference genes

Program Settings