Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g068810.2 Solanum lycopersicum HOM05D003975 ORTHO05D009899 4.7e-41 170.6 78 100.0
Sopen11g027530 Solanum pennellii HOM05D003975 ORTHO05D009899 4.7e-41 170.6 78 100.0
PGSC0003DMG400019630 Solanum tuberosum HOM05D003975 ORTHO05D009899 3.9e-40 167.5 78 98.7
CAN.G745.37 Capsicum annuum HOM05D003975 ORTHO05D009899 8.2e-38 159.8 78 92.3
CAN.G745.38 Capsicum annuum HOM05D003975 ORTHO05D009899 3.1e-37 157.9 78 91.0
Nitab4.5_0000893g0020 Nicotiana tabacum HOM05D003975 ORTHO05D009899 1.6e-36 155.6 78 89.7
Nitab4.5_0001135g0190 Nicotiana tabacum HOM05D003975 ORTHO05D009899 1.3e-35 152.5 78 87.2
Hma1.2p1_0793F.1_g218650 Hydrangea macrophylla HOM05D003975 ORTHO05D009899 1.7e-35 152.1 78 84.6
Peaxi162Scf00224g00092 Petunia axillaris HOM05D003975 ORTHO05D009899 2.2e-35 151.8 73 94.5
GSVIVG01036058001 Vitis vinifera HOM05D003975 ORTHO05D009899 2.2e-35 151.8 78 83.3
CSS0027551 Camellia sinensis var. sinensis HOM05D003975 ORTHO05D009899 2.9e-35 151.4 78 84.6
Thecc.09G275700 Theobroma cacao HOM05D003975 ORTHO05D009899 2.9e-35 151.4 79 86.1
FAN21G0333 Fragaria x ananassa HOM05D004708 ORTHO05D005573 3.8e-35 151.0 78 84.6
FAN11G2897 Fragaria x ananassa HOM05D004708 ORTHO05D009899 5.0e-35 150.6 78 84.6
RcHm_v2.0_Chr5g0047291 Rosa chinensis HOM05D003975 ORTHO05D009899 6.5e-35 150.2 78 83.3
Eucgr.J00540 Eucalyptus grandis HOM05D003975 ORTHO05D009899 1.1e-34 149.4 78 83.3
Thecc.09G155000 Theobroma cacao HOM05D003975 ORTHO05D009899 1.1e-34 149.4 79 84.8
ClCG02G022390 Citrullus lanatus HOM05D003975 ORTHO05D009899 1.5e-34 149.1 81 82.7
Sed0002680 Sechium edule HOM05D003975 ORTHO05D009899 1.5e-34 149.1 80 83.8
Gorai.001G124000 Gossypium raimondii HOM05D003975 ORTHO05D009899 1.9e-34 148.7 79 84.8
Atru.chr3.3141 Acer truncatum HOM05D003975 ORTHO05D009899 3.2e-34 147.9 78 83.3
Gohir.D07G115700 Gossypium hirsutum HOM05D003975 ORTHO05D009899 5.5e-34 147.1 79 83.5
Cfa009967 Carpinus fangiana HOM05D003975 ORTHO05D009899 1.6e-33 145.6 79 81.0
MD03G1152900 Malus domestica HOM05D003975 ORTHO05D009899 1.6e-33 145.6 78 82.1
MELO3C014515.2 Cucumis melo HOM05D003975 ORTHO05D009899 2.7e-33 144.8 78 83.3
Dinv08130 Davidia involucrata HOM05D003975 ORTHO05D009899 3.6e-33 144.4 78 79.5
Duzib150G1666 Durio zibethinus HOM05D003975 ORTHO05D009899 3.6e-33 144.4 79 82.3
Gohir.A07G112200 Gossypium hirsutum HOM05D003975 ORTHO05D009899 6.1e-33 143.7 79 82.3
Haze_23328 Corylus avellana HOM05D003975 ORTHO05D009899 8.0e-33 143.3 79 79.7
CANSAT54G1521 Cannabis sativa HOM05D003975 ORTHO05D009899 1.4e-32 142.5 76 80.3
QL01p011344 Quercus lobata HOM05D003975 ORTHO05D009899 1.4e-32 142.5 78 78.2
SalBow6G3564 Salvia bowleyana HOM05D003975 ORTHO05D009899 1.4e-32 142.5 79 77.2
Cc01_g08600 Coffea canephora HOM05D003975 ORTHO05D009899 2.3e-32 141.7 81 77.8
Prupe.6G140000 Prunus persica HOM05D003975 ORTHO05D009899 8.8e-32 139.8 78 76.9
Nn6g34748 Nelumbo nucifera HOM05D003975 ORTHO05D009899 4.4e-31 137.5 81 72.8
TWI31G0968 Tripterygium wilfordii HOM05D003975 ORTHO05D009899 4.4e-31 137.5 78 80.8
COL.COLO4_22656 Corchorus olitorius HOM05D003975 ORTHO05D009899 5.7e-31 137.1 86 73.3
CsaV3_6G038520 Cucumis sativus L. HOM05D003975 ORTHO05D009899 5.7e-31 137.1 73 80.8
MBI01_g04527_MAGBIO Magnolia biondii HOM05D003975 ORTHO05D009899 5.7e-31 137.1 78 69.2
Sabra04G0136000 Salix brachista HOM05D003975 ORTHO05D009762 5.7e-31 137.1 85 72.9
DCAR_013070 Daucus carota HOM05D003975 ORTHO05D009899 9.8e-31 136.3 80 75.0
Migut.D02414 Erythranthe guttata HOM05D003975 ORTHO05D009899 9.8e-31 136.3 79 75.9
TAR633G2299 Trochodendron aralioides HOM05D003975 ORTHO05D009899 9.8e-31 136.3 72 80.6
PSO339G0200 Papaver somniferum HOM05D003975 ORTHO05D009899 1.3e-30 136.0 81 71.6
PSO384G0061 Papaver somniferum HOM05D003975 ORTHO05D009899 1.3e-30 136.0 81 71.6
Potri.009G162200 Populus trichocarpa HOM05D003975 ORTHO05D009899 2.2e-30 135.2 85 71.8
Potri.004G201000 Populus trichocarpa HOM05D003975 ORTHO05D009899 2.8e-30 134.8 85 72.9
Sabra15G0053200 Salix brachista HOM05D003975 ORTHO05D009899 1.4e-29 132.5 87 67.8
Sabra15G0046300 Salix brachista HOM05D003975 ORTHO05D009899 2.4e-29 131.7 86 68.6
Sabra15G0052000 Salix brachista HOM05D003975 ORTHO05D009899 2.4e-29 131.7 86 68.6
Sabra15G0053900 Salix brachista HOM05D003975 ORTHO05D009899 2.4e-29 131.7 86 68.6
Sabra09G0126700 Salix brachista HOM05D003975 ORTHO05D009762 5.4e-29 130.6 85 68.2
Sabra15G0031600 Salix brachista HOM05D003975 ORTHO05D009899 5.4e-29 130.6 85 68.2
Sabra15G0048400 Salix brachista HOM05D003975 ORTHO05D009899 5.4e-29 130.6 85 68.2
Sabra15G0060100 Salix brachista HOM05D003975 ORTHO05D009899 5.4e-29 130.6 85 68.2
ECA238G1997 Erigeron canadensis HOM05D003975 ORTHO05D009899 1.6e-28 129.0 78 71.8
HanXRQChr09g0248811 Helianthus annuus HOM05D003975 ORTHO05D009899 2.0e-28 128.6 75 69.3
Ciclev10029713m.g Citrus clementina HOM05D003975 ORTHO05D009899 3.5e-28 127.9 83 71.1
ATR0772G086 Amborella trichopoda HOM05D003975 ORTHO05D009899 5.9e-28 127.1 83 65.1
Aqoxy4G02677 Aquilegia oxysepala HOM05D003975 ORTHO05D009899 1.0e-27 126.3 85 64.7
Lsat_1_v5_gn_2_56181 Lactuca sativa HOM05D000240 ORTHO05D001153 1.7e-27 125.6 81 67.9
AUR62011465 Chenopodium quinoa HOM05D003975 ORTHO05D009899 2.9e-27 124.8 78 64.1
Lalb_Chr09g0335081 Lupinus albus HOM05D003975 ORTHO05D009899 3.8e-27 124.4 79 72.2
unitig_0.g1469 Utricularia gibba HOM05D003975 ORTHO05D009899 5.0e-27 124.0 79 69.6
Glyma.08G290000 Glycine max HOM05D003975 ORTHO05D009899 6.5e-27 123.6 78 69.2
THA.LOC104799562 Tarenaya hassleriana HOM05D003975 ORTHO05D009899 1.5e-26 122.5 80 68.8
arahy.Tifrunner.gnm1.ann1.QQFJ2J Arachis hypogaea HOM05D003975 ORTHO05D009899 7.2e-26 120.2 79 67.1
arahy.Tifrunner.gnm1.ann1.V52YDZ Arachis hypogaea HOM05D003975 ORTHO05D009899 7.2e-26 120.2 79 67.1
Sc03g0003650 Simmondsia chinensis HOM05D003975 ORTHO05D009899 7.2e-26 120.2 78 65.4
Phvul.003G054000 Phaseolus vulgaris HOM05D003975 ORTHO05D009899 1.2e-25 119.4 78 66.7
AUR62016590 Chenopodium quinoa HOM05D003975 ORTHO05D009899 2.1e-25 118.6 78 61.5
Glyma.18G134500 Glycine max HOM05D003975 ORTHO05D009899 2.1e-25 118.6 78 65.4
A10p18580 Brassica napus HOM05D003975 ORTHO05D009899 6.1e-25 117.1 81 65.4
Ah.01g020290 Amaranthus hybridus HOM05D003975 ORTHO05D009899 8.0e-25 116.7 80 63.8
BcaC04g19558 Brassica carinata HOM05D003975 ORTHO05D009899 8.0e-25 116.7 81 64.2
C09p54430 Brassica napus HOM05D003975 ORTHO05D009899 8.0e-25 116.7 81 64.2
BolC9t58312H Brassica oleracea HOM05D003975 ORTHO05D009899 8.0e-25 116.7 81 64.2
CARHR191340 Cardamine hirsuta HOM05D003975 ORTHO05D009899 8.0e-25 116.7 81 67.9
Sp6g23020 Schrenkiella parvula HOM05D003975 ORTHO05D009899 8.0e-25 116.7 81 67.9
AT5G22210 Arabidopsis thaliana HOM05D003975 ORTHO05D009899 1.8e-24 115.5 81 66.7
BraA10t43938Z Brassica rapa HOM05D003975 ORTHO05D009899 5.2e-24 114.0 81 64.2
HPP92_009773 Vanilla planifolia HOM05D000917 ORTHO05D009899 8.8e-24 113.2 80 58.8
EL10Ac9g21860 Beta vulgaris HOM05D003975 ORTHO05D009899 1.2e-23 112.8 79 62.0
Carub.0006s1995 Capsella rubella HOM05D003975 ORTHO05D009899 1.5e-23 112.5 81 64.2
AL6G33210 Arabidopsis lyrata HOM05D003975 ORTHO05D009899 2.0e-23 112.1 81 65.4
BcaB08g36448 Brassica carinata HOM05D003975 ORTHO05D009899 3.4e-23 111.3 81 63.0
HPP92_009742 Vanilla planifolia HOM05D000917 ORTHO05D000764 5.7e-23 110.5 81 58.0
TAR268G0001 Trochodendron aralioides HOM05D001423 ORTHO05D001412 8.3e-22 106.7 71 66.2
MBI04_g20761_MAGBIO Magnolia biondii HOM05D003975 ORTHO05D009899 1.0e-08 63.2 47 51.1
SEGI_31848 Sequoiadendron giganteum HOM05D003975 ORTHO05D009899 9.8e-07 56.6 42 54.8
MBI18_g28520_MAGBIO Magnolia biondii HOM05D003975 ORTHO05D009899 2.2e-06 55.5 36 58.3


User provided reference genes

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