Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g027410 Solanum pennellii HOM05D007535 ORTHO05D008520 1.6e-193 679.9 518 100.0
Solyc11g068690.2 Solanum lycopersicum HOM05D007535 ORTHO05D008520 9.2e-186 654.1 518 97.5
PGSC0003DMG400026347 Solanum tuberosum HOM05D007535 ORTHO05D008520 4.5e-172 608.6 518 93.6
CAN.G745.17 Capsicum annuum HOM05D007535 ORTHO05D008520 3.6e-121 439.5 519 79.0
Peaxi162Scf00224g00216 Petunia axillaris HOM05D007535 ORTHO05D008520 1.6e-113 414.1 521 76.6
Nitab4.5_0000731g0020 Nicotiana tabacum HOM05D007535 ORTHO05D008520 3.5e-100 369.8 525 73.5
Nitab4.5_0008177g0030 Nicotiana tabacum HOM05D007535 ORTHO05D008520 2.3e-96 357.1 525 70.1
Thecc.09G278200 Theobroma cacao HOM05D007535 ORTHO05D008520 8.2e-41 172.6 526 46.2
Prupe.6G137100 Prunus persica HOM05D007535 ORTHO05D008520 7.6e-39 166.0 521 53.4
Actinidia07260 Actinidia chinensis HOM05D007535 ORTHO05D008520 2.2e-38 164.5 526 51.0
Psat5g257880 Pisum sativum HOM05D007535 ORTHO05D008520 4.2e-37 160.2 523 49.7
Medtr2g086950 Medicago truncatula HOM05D007535 ORTHO05D008520 1.3e-35 155.2 525 53.3
Hund18777 Selenicereus undatus HOM05D007535 ORTHO05D008520 3.9e-35 153.7 521 43.8
vmacro03328 Vaccinium macrocarpon HOM05D007535 ORTHO05D008520 5.1e-35 153.3 535 37.8
SGA_v2.0_scaffold177G39436 Striga asiatica HOM05D007535 ORTHO05D008520 8.7e-35 152.5 530 45.7
Nn6g34805 Nelumbo nucifera HOM05D007535 ORTHO05D008520 1.5e-34 151.8 492 52.2
Rhsim13G0113500 Rhododendron simsii HOM05D000001 ORTHO05D000003 4.3e-34 150.2 554 35.4
CSS0035480 Camellia sinensis var. sinensis HOM05D007535 ORTHO05D008520 3.7e-33 147.1 330 39.1
RcHm_v2.0_Chr5g0046091 Rosa chinensis HOM05D007535 ORTHO05D008520 3.7e-33 147.1 516 53.5
Gorai.004G011300 Gossypium raimondii HOM05D007535 ORTHO05D008520 1.8e-32 144.8 518 48.6
PSO384G1635 Papaver somniferum HOM05D007535 ORTHO05D008520 1.8e-32 144.8 518 46.9
Hma1.2p1_2164F.1_g315730 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 6.9e-32 142.9 326 36.5
Hma1.2p1_2164F.1_g315740 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 9.0e-32 142.5 325 36.3
DCAR_024892 Daucus carota HOM05D007535 ORTHO05D008520 2.0e-31 141.4 529 41.6
Gohir.A08G006800 Gossypium hirsutum HOM05D007535 ORTHO05D008520 1.0e-30 139.0 520 46.5
Nitab4.5_0001640g0010 Nicotiana tabacum HOM05D007535 ORTHO05D008520 1.0e-30 139.0 316 39.2
Migut.N02473 Erythranthe guttata HOM05D007535 ORTHO05D008520 2.9e-30 137.5 518 51.9
Lj2A969T70 Lonicera japonica HOM05D007535 ORTHO05D008520 2.9e-30 137.5 562 37.7
Gohir.D08G017000 Gossypium hirsutum HOM05D007535 ORTHO05D008520 5.0e-30 136.7 524 47.7
GSVIVG01036079001 Vitis vinifera HOM05D007535 ORTHO05D008520 5.0e-30 136.7 519 51.3
Cc00_g20950 Coffea canephora HOM05D007535 ORTHO05D008520 1.1e-29 135.6 525 51.0
Lsat_1_v5_gn_2_34620 Lactuca sativa HOM05D007535 ORTHO05D008520 1.1e-29 135.6 374 58.6
unitig_27.g25117 Utricularia gibba HOM05D007535 ORTHO05D008520 4.2e-29 133.7 527 48.4
EL10Ac7g16124 Beta vulgaris HOM05D007535 ORTHO05D008520 3.6e-28 130.6 523 41.1
ECA238G4833 Erigeron canadensis HOM05D007535 ORTHO05D008520 4.6e-28 130.2 347 53.3
MD03G1150100 Malus domestica HOM05D007535 ORTHO05D008520 6.1e-28 129.8 515 51.5
TAR633G1755 Trochodendron aralioides HOM05D007535 ORTHO05D008520 6.1e-28 129.8 520 51.3
Sed0017293 Sechium edule HOM05D007535 ORTHO05D008520 1.8e-27 128.3 520 50.6
MSTRG.12377 Avicennia marina HOM05D007535 ORTHO05D008520 2.3e-27 127.9 527 51.0
HanXRQChr14g0433121 Helianthus annuus HOM05D007535 ORTHO05D008520 2.3e-27 127.9 364 65.1
PSO339G0294 Papaver somniferum HOM05D007535 ORTHO05D008520 6.7e-27 126.3 516 43.0
Cpa.g.sc195.29 Carica papaya HOM05D007535 ORTHO05D008520 1.1e-26 125.6 320 35.0
Manes.04G001100 Manihot esculenta HOM05D007535 ORTHO05D008520 1.9e-26 124.8 526 47.3
ClCG01G011770 Citrullus lanatus HOM05D007535 ORTHO05D008520 7.4e-26 122.9 525 49.5
Dinv08923 Davidia involucrata HOM05D007535 ORTHO05D008520 7.4e-26 122.9 521 35.9
FvH4_3g25730 Fragaria vesca HOM05D007535 ORTHO05D008520 7.4e-26 122.9 514 51.0
Ca_01647_v3 Cicer arietinum L. HOM05D002184 ORTHO05D002379 1.7e-25 121.7 525 52.0
FAN21G0330 Fragaria x ananassa HOM05D007535 ORTHO05D008520 1.7e-25 121.7 518 42.5
FAN25G3072 Fragaria x ananassa HOM05D007535 ORTHO05D008520 2.8e-25 120.9 513 50.9
FAN11G3206 Fragaria x ananassa HOM05D007535 ORTHO05D008520 8.2e-25 119.4 514 50.4
Sc12g0004670 Simmondsia chinensis HOM05D007535 ORTHO05D008520 8.2e-25 119.4 517 40.2
Glyma.12G186700 Glycine max HOM05D007535 ORTHO05D008520 1.1e-24 119.0 523 50.1
AUR62001527 Chenopodium quinoa HOM05D007535 ORTHO05D008520 3.1e-24 117.5 521 41.5
VMungo1080G1542 Vigna mungo HOM05D007535 ORTHO05D008520 3.4e-23 114.0 523 47.4
SalBow3G0383 Salvia bowleyana HOM05D007535 ORTHO05D008520 7.7e-23 112.8 517 50.1
Aqoxy4G02717 Aquilegia oxysepala HOM05D007535 ORTHO05D008520 1.3e-22 112.1 518 35.3
Ciclev10028368m.g Citrus clementina HOM05D007535 ORTHO05D008520 2.2e-22 111.3 523 51.6
Eucgr.J00525 Eucalyptus grandis HOM05D007535 ORTHO05D008520 2.2e-22 111.3 522 48.7
Sc12g0004620 Simmondsia chinensis HOM05D007535 ORTHO05D008520 6.5e-22 109.8 517 36.9
TWI79G0866 Tripterygium wilfordii HOM05D007535 ORTHO05D008520 8.5e-22 109.4 523 49.5
Lj3g0000707 Lotus japonicus HOM05D007535 ORTHO05D008520 1.1e-21 109.0 526 43.5
Cfa009985 Carpinus fangiana HOM05D007535 ORTHO05D008520 1.2e-20 105.5 369 61.0
THA.LOC104810927 Tarenaya hassleriana HOM05D007535 ORTHO05D008520 2.7e-20 104.4 293 71.7
Oeu024409.1 Olea europaea HOM05D007535 ORTHO05D008520 3.6e-20 104.0 63 81.0
CsaV3_1G015090 Cucumis sativus L. HOM05D007535 ORTHO05D008520 1.0e-19 102.4 523 48.0
QL01p011831 Quercus lobata HOM05D007535 ORTHO05D008520 1.0e-19 102.4 558 45.9
Glyma.13G314800 Glycine max HOM05D007535 ORTHO05D008520 3.9e-19 100.5 368 61.7
Atru.chr3.3166 Acer truncatum HOM05D007535 ORTHO05D008520 8.8e-19 99.4 270 74.4
arahy.Tifrunner.gnm1.ann1.TGP3GH Arachis hypogaea HOM05D007535 ORTHO05D008520 1.1e-18 99.0 538 40.1
CDE02G4009 Ceratophyllum demersum HOM05D007535 ORTHO05D008520 1.1e-18 99.0 518 44.6
Ciclev10029981m.g Citrus clementina HOM05D007535 ORTHO05D008520 1.1e-18 99.0 523 41.5
Duzib150G0908 Durio zibethinus HOM05D007535 ORTHO05D008520 1.1e-18 99.0 164 42.1
MBI17_g01489_MAGBIO Magnolia biondii HOM05D007535 ORTHO05D008520 1.5e-18 98.6 314 30.6
TPR.G4567 Trifolium pratense HOM05D007535 ORTHO05D008520 1.5e-18 98.6 516 47.1
arahy.Tifrunner.gnm1.ann1.ETK20Z Arachis hypogaea HOM05D007535 ORTHO05D008520 3.3e-18 97.4 520 49.0
Haze_23344 Corylus avellana HOM05D007535 ORTHO05D008520 1.7e-17 95.1 120 50.8
Potri.004G199200 Populus trichocarpa HOM05D007535 ORTHO05D008520 2.8e-17 94.4 517 48.9
Hma1.2p1_2164F.1_g315720 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 1.4e-16 92.0 61 73.8
Zm00001eb140080 Zea mays HOM05D007535 ORTHO05D008520 7.0e-16 89.7 525 47.6
Actinidia24230 Actinidia chinensis HOM05D007535 ORTHO05D008520 1.5e-15 88.6 73 63.0
FAN25G1573 Fragaria x ananassa HOM05D007535 ORTHO05D008520 1.5e-15 88.6 355 62.0
CiPaw.14G097800 Carya illinoinensis HOM05D007535 ORTHO05D008520 2.0e-15 88.2 458 52.8
PGR119G1786 Punica granatum HOM05D007535 ORTHO05D008520 2.0e-15 88.2 526 48.1
MELO3C025588.2 Cucumis melo HOM05D007535 ORTHO05D008520 2.6e-15 87.8 319 30.1
Lalb_Chr24g0393491 Lupinus albus HOM05D007535 ORTHO05D008520 2.6e-15 87.8 239 34.3
Sabra04G0134300 Salix brachista HOM05D001716 ORTHO05D004234 1.1e-13 82.4 518 38.6
CANSAT54G2250 Cannabis sativa HOM05D007535 ORTHO05D008520 1.9e-13 81.6 519 48.7
Os01g0966400 Oryza sativa ssp. japonica HOM05D007535 ORTHO05D008520 1.6e-12 78.6 315 31.4
HPP92_011495 Vanilla planifolia HOM05D007535 ORTHO05D008520 2.7e-12 77.8 316 28.5
AUR62020256 Chenopodium quinoa HOM05D007535 ORTHO05D008520 3.6e-12 77.4 273 52.0
Carub.0006s2006 Capsella rubella HOM05D012474 ORTHO05D008520 2.6e-10 71.2 306 62.7
Ciclev10028316m.g Citrus clementina HOM05D007535 ORTHO05D008520 2.6e-10 71.2 521 47.2
AL6G33340 Arabidopsis lyrata HOM05D012474 ORTHO05D008520 3.3e-10 70.9 281 66.9
ATR0081G029 Amborella trichopoda HOM05D007535 ORTHO05D008520 1.8e-08 65.1 164 33.5
C09p54250 Brassica napus HOM05D012474 ORTHO05D008520 2.4e-08 64.7 78 46.2
C09p54330 Brassica napus HOM05D012474 ORTHO05D008520 2.4e-08 64.7 78 46.2
BolC9t58300H Brassica oleracea HOM05D012474 ORTHO05D008520 2.4e-08 64.7 78 46.2
BcaC04g19565 Brassica carinata HOM05D012474 ORTHO05D008520 5.3e-08 63.5 78 46.2
FAN16G1906 Fragaria x ananassa HOM05D007535 ORTHO05D008520 1.2e-07 62.4 314 25.2
CSS0011293 Camellia sinensis var. sinensis HOM05D007535 ORTHO05D008520 2.0e-07 61.6 42 73.8
CARHR191220 Cardamine hirsuta HOM05D012474 ORTHO05D008520 2.0e-07 61.6 303 62.7
Actinidia24231 Actinidia chinensis HOM05D007535 ORTHO05D008520 1.0e-06 59.3 165 35.8
A10p18500 Brassica napus HOM05D012474 ORTHO05D008520 1.0e-06 59.3 75 45.3
BraA10t43930Z Brassica rapa HOM05D012474 ORTHO05D008520 1.0e-06 59.3 75 45.3
Thhalv10013516m.g Eutrema salsugineum HOM05D012474 ORTHO05D008520 5.0e-06 57.0 95 38.9
Sp6g22920 Schrenkiella parvula HOM05D012474 ORTHO05D008520 5.0e-06 57.0 75 42.7
CSS0011895 Camellia sinensis var. sinensis HOM05D007535 ORTHO05D008520 6.5e-06 56.6 39 74.4


User provided reference genes

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