Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g027390 Solanum pennellii HOM05D004765 ORTHO05D005900 0.0e+00 1094.0 565 100.0
Solyc11g068670.2 Solanum lycopersicum HOM05D004765 ORTHO05D005900 0.0e+00 1088.9 565 99.6
CAN.G745.10 Capsicum annuum HOM05D004765 ORTHO05D005900 1.3e-286 989.2 565 89.7
Nitab4.5_0008177g0070 Nicotiana tabacum HOM05D004765 ORTHO05D005900 2.1e-284 981.9 621 84.5
Nitab4.5_0000731g0090 Nicotiana tabacum HOM05D004765 ORTHO05D005900 2.6e-282 974.9 556 91.4
Peaxi162Scf00224g00217 Petunia axillaris HOM05D004765 ORTHO05D005900 4.1e-280 967.6 564 89.0
Peaxi162Scf00345g01023 Petunia axillaris HOM05D004765 ORTHO05D005900 1.7e-270 935.6 570 84.0
Nitab4.5_0000227g0370 Nicotiana tabacum HOM05D004765 ORTHO05D005900 1.9e-269 932.2 566 84.5
Solyc01g009380.3 Solanum lycopersicum HOM05D004765 ORTHO05D005900 1.6e-268 929.1 566 83.9
Nitab4.5_0003068g0090 Nicotiana tabacum HOM05D004765 ORTHO05D005900 5.8e-266 920.6 553 85.7
Dinv08934 Davidia involucrata HOM05D004765 ORTHO05D005900 5.1e-246 854.4 568 77.3
Dinv22819 Davidia involucrata HOM05D004765 ORTHO05D005900 1.1e-245 853.2 552 79.2
Cc01_g08830 Coffea canephora HOM05D004765 ORTHO05D005900 3.3e-245 851.7 585 74.9
Migut.N02474 Erythranthe guttata HOM05D004765 ORTHO05D005900 5.6e-245 850.9 564 77.8
MSTRG.18770 Avicennia marina HOM05D004765 ORTHO05D005900 2.4e-243 845.5 564 76.4
Cfa009988 Carpinus fangiana HOM05D004765 ORTHO05D005900 3.4e-242 841.6 551 78.2
CSS0015967 Camellia sinensis var. sinensis HOM05D004765 ORTHO05D005900 5.8e-242 840.9 551 77.9
CSS0013873 Camellia sinensis var. sinensis HOM05D004765 ORTHO05D005900 1.3e-241 839.7 551 77.9
CSS0028820 Camellia sinensis var. sinensis HOM05D004765 ORTHO05D005900 2.2e-241 839.0 551 77.9
CSS0022046 Camellia sinensis var. sinensis HOM05D004765 ORTHO05D005900 4.9e-241 837.8 551 77.5
Actinidia07259 Actinidia chinensis HOM05D004765 ORTHO05D005900 8.4e-241 837.0 551 77.3
Actinidia24229 Actinidia chinensis HOM05D004765 ORTHO05D005900 8.4e-241 837.0 551 76.6
vmacro14340 Vaccinium macrocarpon HOM05D004765 ORTHO05D005900 1.2e-239 833.2 550 76.9
Potri.009G160400 Populus trichocarpa HOM05D004765 ORTHO05D005900 1.6e-239 832.8 568 75.0
GSVIVG01036081001 Vitis vinifera HOM05D004765 ORTHO05D005900 3.5e-239 831.6 567 75.0
Prupe.6G135800 Prunus persica HOM05D004765 ORTHO05D005900 7.9e-239 830.5 552 77.5
Manes.11G164300 Manihot esculenta HOM05D004765 ORTHO05D005900 2.3e-238 828.9 562 74.2
RcHm_v2.0_Chr5g0045881 Rosa chinensis HOM05D004765 ORTHO05D005900 3.6e-236 821.6 552 76.6
CiPaw.14G098100 Carya illinoinensis HOM05D004765 ORTHO05D005900 4.8e-236 821.2 553 75.6
MD03G1149800 Malus domestica HOM05D004765 ORTHO05D005900 9.0e-235 817.0 574 74.9
Thecc.09G278900 Theobroma cacao HOM05D004765 ORTHO05D005900 9.0e-235 817.0 550 75.6
DCAR_006171 Daucus carota HOM05D004765 ORTHO05D005900 1.5e-234 816.2 551 75.7
Haze_23347 Corylus avellana HOM05D004765 ORTHO05D005900 5.8e-234 814.3 619 69.6
PGR119G0504 Punica granatum HOM05D004765 ORTHO05D005900 5.8e-234 814.3 552 75.5
QL01p011857 Quercus lobata HOM05D004765 ORTHO05D005900 7.6e-234 813.9 547 75.7
Ciclev10028115m.g Citrus clementina HOM05D004765 ORTHO05D005900 1.3e-233 813.1 566 73.5
Cpa.g.sc195.23 Carica papaya HOM05D004765 ORTHO05D005900 4.9e-233 811.2 557 74.3
Rhsim01G0203800 Rhododendron simsii HOM05D004765 ORTHO05D005900 1.9e-232 809.3 603 70.6
Gohir.D05G082500 Gossypium hirsutum HOM05D004765 ORTHO05D005900 2.4e-232 808.9 550 74.7
CARHR104550 Cardamine hirsuta HOM05D004765 ORTHO05D005900 3.2e-232 808.5 559 73.5
TWI31G1403 Tripterygium wilfordii HOM05D004765 ORTHO05D005900 3.2e-232 808.5 552 73.9
TPR.G17196 Trifolium pratense HOM05D004765 ORTHO05D005900 5.5e-232 807.7 568 72.5
Gorai.009G084100 Gossypium raimondii HOM05D004765 ORTHO05D005900 9.3e-232 807.0 550 74.5
Sabra04G0134200 Salix brachista HOM05D004765 ORTHO05D005900 1.2e-231 806.6 567 72.1
Ca_19442_v3 Cicer arietinum L. HOM05D004765 ORTHO05D005900 1.6e-231 806.2 568 72.2
ECA248G3663 Erigeron canadensis HOM05D004765 ORTHO05D005900 2.7e-231 805.4 552 74.3
Sabra09G0125600 Salix brachista HOM05D004765 ORTHO05D005900 3.5e-231 805.1 571 72.3
Glyma.11G181400 Glycine max HOM05D004765 ORTHO05D005900 6.0e-231 804.3 562 72.4
Gohir.A05G079600 Gossypium hirsutum HOM05D004765 ORTHO05D005900 6.0e-231 804.3 550 74.5
COL.COLO4_34006 Corchorus olitorius HOM05D004765 ORTHO05D005900 7.9e-231 803.9 550 74.4
FAN11G2377 Fragaria x ananassa HOM05D004765 ORTHO05D005900 1.3e-230 803.1 552 75.2
Lalb_Chr01g0004931 Lupinus albus HOM05D004765 ORTHO05D005900 1.3e-230 803.1 565 71.9
SGA_v2.0_scaffold177G39433 Striga asiatica HOM05D004765 ORTHO05D005900 1.8e-230 802.7 570 72.3
MD11G1168600 Malus domestica HOM05D004765 ORTHO05D005900 2.3e-230 802.4 552 75.4
Carub.0005s1005 Capsella rubella HOM05D004765 ORTHO05D005900 3.0e-230 802.0 560 72.5
Hund20934 Selenicereus undatus HOM05D004765 ORTHO05D005900 3.0e-230 802.0 552 74.1
Potri.004G198200 Populus trichocarpa HOM05D004765 ORTHO05D005900 3.9e-230 801.6 568 72.2
FAN16G1441 Fragaria x ananassa HOM05D004765 ORTHO05D005900 5.1e-230 801.2 552 74.8
HanXRQChr11g0343661 Helianthus annuus HOM05D004765 ORTHO05D005900 5.1e-230 801.2 553 73.6
Phvul.011G096100 Phaseolus vulgaris HOM05D004765 ORTHO05D005900 6.7e-230 800.8 565 71.7
Lj3g0002417 Lotus japonicus HOM05D004765 ORTHO05D005900 1.1e-229 800.0 567 71.4
Lsat_1_v5_gn_1_77581 Lactuca sativa HOM05D004765 ORTHO05D005900 1.5e-229 799.7 553 74.0
Glyma.12G091700 Glycine max HOM05D004765 ORTHO05D005900 1.9e-229 799.3 562 72.1
Gorai.006G113500 Gossypium raimondii HOM05D004765 ORTHO05D005900 2.5e-229 798.9 569 72.1
AL5G22480 Arabidopsis lyrata HOM05D004765 ORTHO05D005900 3.3e-229 798.5 560 72.9
Sp5g16890 Schrenkiella parvula HOM05D004765 ORTHO05D005900 3.3e-229 798.5 562 72.6
Gohir.A09G097000 Gossypium hirsutum HOM05D004765 ORTHO05D005900 5.6e-229 797.7 568 72.0
AT3G44330 Arabidopsis thaliana HOM05D004765 ORTHO05D005900 7.4e-229 797.3 560 72.5
Gohir.D09G096800 Gossypium hirsutum HOM05D004765 ORTHO05D005900 7.4e-229 797.3 569 72.1
Lalb_Chr03g0028231 Lupinus albus HOM05D004765 ORTHO05D005900 2.8e-228 795.4 568 72.0
Medtr4g052530 Medicago truncatula HOM05D004765 ORTHO05D005900 2.8e-228 795.4 587 69.3
THA.LOC104814781 Tarenaya hassleriana HOM05D004765 ORTHO05D005900 2.8e-228 795.4 549 73.2
TWI79G1303 Tripterygium wilfordii HOM05D004765 ORTHO05D005900 2.8e-228 795.4 552 73.0
Thhalv10010249m.g Eutrema salsugineum HOM05D004765 ORTHO05D005900 3.7e-228 795.0 562 72.2
CANSAT54G2137 Cannabis sativa HOM05D004765 ORTHO05D005900 6.2e-228 794.3 555 73.5
SalBow6G2851 Salvia bowleyana HOM05D004765 ORTHO05D005900 1.4e-227 793.1 606 69.1
HanXRQChr01g0024031 Helianthus annuus HOM05D004765 ORTHO05D005900 3.1e-227 792.0 551 72.8
Oeu051604.1 Olea europaea HOM05D004765 ORTHO05D005900 3.1e-227 792.0 571 73.0
FAN25G0471 Fragaria x ananassa HOM05D004765 ORTHO05D005900 9.0e-227 790.4 575 72.5
FAN21G2648 Fragaria x ananassa HOM05D004765 ORTHO05D005900 2.6e-226 788.9 567 73.0
arahy.Tifrunner.gnm1.ann1.HXUJ4C Arachis hypogaea HOM05D004765 ORTHO05D005900 2.2e-225 785.8 550 73.1
arahy.Tifrunner.gnm1.ann1.E8Y1JT Arachis hypogaea HOM05D004765 ORTHO05D005900 4.9e-225 784.6 550 73.1
BraA06t25294Z Brassica rapa HOM05D004765 ORTHO05D005900 4.9e-225 784.6 547 73.1
BcaC01g02231 Brassica carinata HOM05D004765 ORTHO05D005900 8.4e-225 783.9 565 71.7
A06p26850 Brassica napus HOM05D004765 ORTHO05D005900 1.4e-224 783.1 563 72.1
Sc12g0004610 Simmondsia chinensis HOM05D004765 ORTHO05D005900 1.9e-224 782.7 552 72.3
ATR0081G060 Amborella trichopoda HOM05D004765 ORTHO05D005900 2.5e-224 782.3 550 71.1
Sed0019641 Sechium edule HOM05D004765 ORTHO05D005900 1.2e-223 780.0 567 71.1
A06p22050 Brassica napus HOM05D004765 ORTHO05D005900 1.6e-223 779.6 550 72.5
BcaB01g01169 Brassica carinata HOM05D004765 ORTHO05D005900 2.1e-223 779.2 547 71.7
Atru.chr3.3169 Acer truncatum HOM05D004765 ORTHO05D005900 3.5e-223 778.5 548 73.9
BcaB02g10755 Brassica carinata HOM05D004765 ORTHO05D005900 6.0e-223 777.7 562 71.5
ClCG01G011820 Citrullus lanatus HOM05D004765 ORTHO05D005900 6.0e-223 777.7 562 71.4
PSO801G0028 Papaver somniferum HOM05D004765 ORTHO05D005900 1.8e-222 776.2 565 71.3
PSO339G1244 Papaver somniferum HOM05D004765 ORTHO05D005900 5.1e-222 774.6 565 70.8
MELO3C025589.2 Cucumis melo HOM05D004765 ORTHO05D005900 1.9e-221 772.7 561 71.1
C03p69330 Brassica napus HOM05D004765 ORTHO05D005900 3.3e-221 771.9 547 72.0
BolC3t19191H Brassica oleracea HOM05D004765 ORTHO05D005900 3.3e-221 771.9 547 72.0
SGA_v2.0_scaffold295G47508 Striga asiatica HOM05D004765 ORTHO05D005900 9.6e-221 770.4 557 70.0
CsaV3_1G015080 Cucumis sativus L. HOM05D004765 ORTHO05D005900 1.6e-220 769.6 561 70.6
BcaC01g02031 Brassica carinata HOM05D004765 ORTHO05D005900 2.1e-220 769.2 547 71.7
Eucgr.J00522 Eucalyptus grandis HOM05D004765 ORTHO05D005900 1.1e-219 766.9 529 73.2
CDE08G1681 Ceratophyllum demersum HOM05D004765 ORTHO05D005900 5.0e-217 758.1 532 71.4
Nn6g34806 Nelumbo nucifera HOM05D004765 ORTHO05D005900 4.2e-216 755.0 564 70.2
Aa31LG4G13830 Aethionema arabicum HOM05D004765 ORTHO05D005900 4.6e-215 751.5 540 70.6
AUR62020257 Chenopodium quinoa HOM05D004765 ORTHO05D005900 4.6e-215 751.5 540 71.3
Duzib170G0619 Durio zibethinus HOM05D004765 ORTHO05D005900 4.3e-213 745.0 550 69.6
Aqoxy2G01052 Aquilegia oxysepala HOM05D004765 ORTHO05D005900 4.8e-212 741.5 565 67.6
Psat7g187280 Pisum sativum HOM05D004765 ORTHO05D005900 4.1e-211 738.4 522 71.3
Aqoxy4G02718 Aquilegia oxysepala HOM05D004765 ORTHO05D005900 1.6e-207 726.5 602 63.6
EL10Ac7g16329 Beta vulgaris HOM05D004765 ORTHO05D005900 7.9e-207 724.2 628 61.8
HPP92_006357 Vanilla planifolia HOM05D004765 ORTHO05D005900 9.7e-205 717.2 549 66.1
unitig_0.g1473 Utricularia gibba HOM05D004765 ORTHO05D005900 3.7e-204 715.3 578 65.7
Os08g0102100 Oryza sativa ssp. japonica HOM05D004765 ORTHO05D005900 4.8e-204 714.9 547 64.9
Migut.D02363 Erythranthe guttata HOM05D004765 ORTHO05D005900 8.2e-204 714.1 476 74.6
Lj1A257T30 Lonicera japonica HOM05D004765 ORTHO05D005900 5.0e-201 704.9 435 81.4
CDE02G4012 Ceratophyllum demersum HOM05D004765 ORTHO05D005900 6.7e-198 694.5 553 66.0
Zm00001eb259900 Zea mays HOM05D004765 ORTHO05D005900 2.0e-197 693.0 549 63.4
Duzib168G0312 Durio zibethinus HOM05D004765 ORTHO05D005900 1.6e-194 683.3 550 66.2
FvH4_3g25670 Fragaria vesca HOM05D004765 ORTHO05D005900 1.6e-191 673.3 467 73.4
Mapoly0185s0020 Marchantia polymorpha HOM05D004765 ORTHO05D005900 4.5e-186 655.2 546 60.6
Pp3c12_11630 Physcomitrium patens HOM05D004765 ORTHO05D005900 8.8e-182 641.0 548 60.0
Sc12g0004660 Simmondsia chinensis HOM05D004765 ORTHO05D005900 2.0e-181 639.8 479 69.1
Zm00001eb198750 Zea mays HOM05D004765 ORTHO05D005900 1.2e-178 630.6 496 62.1
SMO141G0161 Selaginella moellendorffii HOM05D004765 ORTHO05D005900 2.3e-174 616.3 558 57.9
AUR62001526 Chenopodium quinoa HOM05D004765 ORTHO05D005900 2.9e-164 582.8 420 70.2
Oeu014468.1 Olea europaea HOM05D004765 ORTHO05D005900 8.0e-159 564.7 359 80.5
BraA06t25618Z Brassica rapa HOM05D004765 ORTHO05D005900 5.2e-158 562.0 402 70.6
C03p67600 Brassica napus HOM05D004765 ORTHO05D005900 1.5e-157 560.5 404 69.8
BolSC21t60262H Brassica oleracea HOM05D004765 ORTHO05D005900 1.7e-156 557.0 404 69.6
Sopen01g004890 Solanum pennellii HOM05D004765 ORTHO05D005900 4.9e-156 555.4 341 81.8
TAR633G2468 Trochodendron aralioides HOM05D004765 ORTHO05D005900 4.7e-151 538.9 369 73.7
CBR_g17963 Chara braunii HOM05D004765 ORTHO05D005900 3.2e-147 526.2 564 50.0
AagrBONN_evm.TU.Sc2ySwM_368.2350 Anthoceros agrestis HOM05D004765 ORTHO05D005900 9.9e-133 478.0 534 47.0
CAN.G226.4 Capsicum annuum HOM05D004765 ORTHO05D005900 8.4e-132 474.9 336 73.2
VMungo1127G1239 Vigna mungo HOM05D004765 ORTHO05D005900 6.2e-111 405.6 272 75.7
SEGI_38882 Sequoiadendron giganteum HOM05D004765 ORTHO05D005900 8.2e-95 352.1 220 77.7
CAN.G30.1 Capsicum annuum HOM05D004765 ORTHO05D005900 1.2e-90 338.2 195 83.1
Migut.D02428 Erythranthe guttata HOM05D004765 ORTHO05D005900 4.8e-79 299.7 200 79.5
Psat4g157520 Pisum sativum HOM05D004765 ORTHO05D005900 8.0e-66 255.8 174 72.4
CAN.G198.33 Capsicum annuum HOM05D004765 ORTHO05D005900 5.9e-53 213.0 152 71.1
CAN.G1211.3 Capsicum annuum HOM05D004765 ORTHO05D005900 5.2e-49 199.9 147 70.7
CAN.G79.7 Capsicum annuum HOM05D004765 ORTHO05D005900 4.4e-48 196.8 117 82.9
SEGI_20304 Sequoiadendron giganteum HOM05D004765 ORTHO05D005900 4.9e-47 193.4 173 60.1
CAN.G79.6 Capsicum annuum HOM05D004765 ORTHO05D005900 2.0e-45 188.0 189 59.3
TAR633G0557 Trochodendron aralioides HOM05D004765 ORTHO05D005900 2.3e-28 131.3 127 60.6
Lj1C257T9 Lonicera japonica HOM05D004765 ORTHO05D030006 4.6e-21 107.1 78 67.9
SEGI_19690 Sequoiadendron giganteum HOM05D004765 ORTHO05D005900 2.3e-20 104.8 72 62.5
Sc12g0004650 Simmondsia chinensis HOM05D004765 ORTHO05D030006 1.1e-17 95.9 76 64.5
VMungo0251G2550 Vigna mungo HOM05D000107 ORTHO05D000001 1.8e-17 95.1 109 48.6
QL04p027443 Quercus lobata HOM05D004765 ORTHO05D030006 3.4e-16 90.9 78 59.0
SEGI_24377 Sequoiadendron giganteum HOM05D004765 ORTHO05D030006 4.4e-16 90.5 81 54.3
Os12g0509400 Oryza sativa ssp. japonica HOM05D004765 ORTHO05D296799 3.8e-07 60.8 49 59.2
Pp3c10_16910 Physcomitrium patens HOM05D004765 ORTHO05D315325 1.9e-06 58.5 112 33.9


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