Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g027190 Solanum pennellii HOM05D006639 ORTHO05D008339 7.7e-76 287.3 176 100.0
Solyc11g068480.2 Solanum lycopersicum HOM05D006639 ORTHO05D008339 4.2e-74 281.6 176 96.0
PGSC0003DMG400026357 Solanum tuberosum HOM05D006639 ORTHO05D008339 7.0e-69 264.2 176 94.3
CAN.G1524.3 Capsicum annuum HOM05D006639 ORTHO05D008339 4.3e-58 228.4 179 81.6
Nitab4.5_0010969g0010 Nicotiana tabacum HOM05D006639 ORTHO05D008339 2.9e-54 215.7 163 83.4
Peaxi162Scf00040g00018 Petunia axillaris HOM05D006639 ORTHO05D008339 1.2e-52 210.3 167 76.0
Nitab4.5_0000755g0110 Nicotiana tabacum HOM05D006639 ORTHO05D008339 1.9e-50 203.0 156 76.9
Oeu022427.1 Olea europaea HOM05D006639 ORTHO05D008339 1.7e-38 163.3 172 59.3
MSTRG.18760 Avicennia marina HOM05D006639 ORTHO05D008339 8.3e-38 161.0 165 61.2
HanXRQChr14g0438101 Helianthus annuus HOM05D006639 ORTHO05D008339 5.4e-37 158.3 118 77.1
Oeu031474.1 Olea europaea HOM05D006639 ORTHO05D008339 9.2e-37 157.5 129 67.4
SGA_v2.0_scaffold22G09859 Striga asiatica HOM05D006639 ORTHO05D008339 1.6e-36 156.8 131 69.5
CSS0034800 Camellia sinensis var. sinensis HOM05D006639 ORTHO05D008339 2.1e-36 156.4 162 61.1
unitig_37.g12892 Utricularia gibba HOM05D006639 ORTHO05D008339 1.0e-35 154.1 128 70.3
CsaV3_6G038390 Cucumis sativus L. HOM05D006639 ORTHO05D008339 1.3e-35 153.7 113 72.6
Migut.D02442 Erythranthe guttata HOM05D006639 ORTHO05D008339 1.3e-35 153.7 168 57.7
MELO3C014503.2 Cucumis melo HOM05D006639 ORTHO05D008339 2.5e-34 149.4 113 71.7
Rhsim13G0112100 Rhododendron simsii HOM05D006639 ORTHO05D008339 3.3e-34 149.1 165 58.2
PGR119G2179 Punica granatum HOM05D006639 ORTHO05D008339 4.3e-34 148.7 128 66.4
Ciclev10029525m.g Citrus clementina HOM05D006639 ORTHO05D008339 5.6e-34 148.3 128 64.8
Cc01_g09080 Coffea canephora HOM05D006639 ORTHO05D008339 7.3e-34 147.9 152 56.6
Lsat_1_v5_gn_2_59441 Lactuca sativa HOM05D006639 ORTHO05D008339 1.2e-33 147.1 116 73.3
Ca_19409_v3 Cicer arietinum L. HOM05D006639 ORTHO05D008339 2.1e-33 146.4 117 70.1
arahy.Tifrunner.gnm1.ann1.I7PXCJ Arachis hypogaea HOM05D006639 ORTHO05D008339 2.8e-33 146.0 114 67.5
Lj3g0014332 Lotus japonicus HOM05D006639 ORTHO05D008339 3.6e-33 145.6 114 68.4
arahy.Tifrunner.gnm1.ann1.UG6V14 Arachis hypogaea HOM05D006639 ORTHO05D008339 4.7e-33 145.2 114 66.7
Lalb_Chr19g0136451 Lupinus albus HOM05D006639 ORTHO05D008339 6.2e-33 144.8 115 68.7
Aqoxy4G02766 Aquilegia oxysepala HOM05D006639 ORTHO05D008339 8.1e-33 144.4 164 53.7
TAR636G3315 Trochodendron aralioides HOM05D006639 ORTHO05D008339 8.1e-33 144.4 153 54.9
Nn6g34885 Nelumbo nucifera HOM05D006639 ORTHO05D008339 1.1e-32 144.1 153 56.9
Eucgr.J00499 Eucalyptus grandis HOM05D006639 ORTHO05D008339 1.4e-32 143.7 123 66.7
Thecc.09G282700 Theobroma cacao HOM05D006639 ORTHO05D008339 1.4e-32 143.7 115 67.0
Gorai.009G085200 Gossypium raimondii HOM05D006639 ORTHO05D008339 1.8e-32 143.3 126 64.3
Hund18759 Selenicereus undatus HOM05D006639 ORTHO05D008339 1.8e-32 143.3 127 63.8
CANSAT56G0593 Cannabis sativa HOM05D006639 ORTHO05D008339 2.4e-32 142.9 160 52.5
CANSAT56G1587 Cannabis sativa HOM05D006639 ORTHO05D008339 2.4e-32 142.9 160 52.5
ClCG02G022260 Citrullus lanatus HOM05D006639 ORTHO05D008339 2.4e-32 142.9 152 56.6
Duzib168G1184 Durio zibethinus HOM05D006639 ORTHO05D008339 2.4e-32 142.9 119 67.2
Psat7g187880 Pisum sativum HOM05D006639 ORTHO05D008339 2.4e-32 142.9 117 70.1
PSO339G4282 Papaver somniferum HOM05D006639 ORTHO05D008339 3.1e-32 142.5 113 67.3
TPR.G17231 Trifolium pratense HOM05D006639 ORTHO05D008339 3.1e-32 142.5 121 66.9
Glyma.11G183100 Glycine max HOM05D006639 ORTHO05D008339 4.0e-32 142.1 117 67.5
Gohir.D05G083500 Gossypium hirsutum HOM05D006639 ORTHO05D008339 5.2e-32 141.7 126 64.3
GSVIVG01036120001 Vitis vinifera HOM05D006639 ORTHO05D008339 6.8e-32 141.4 157 53.5
FAN21G1301 Fragaria x ananassa HOM05D006639 ORTHO05D008339 1.2e-31 140.6 117 67.5
Gohir.A05G080500 Gossypium hirsutum HOM05D006639 ORTHO05D008339 1.2e-31 140.6 118 66.9
FAN25G3607 Fragaria x ananassa HOM05D006639 ORTHO05D008339 1.5e-31 140.2 124 63.7
FAN16G2085 Fragaria x ananassa HOM05D006639 ORTHO05D008339 2.0e-31 139.8 118 66.9
Lj2A946T24 Lonicera japonica HOM05D006639 ORTHO05D008339 2.0e-31 139.8 98 74.5
Potri.009G163500 Populus trichocarpa HOM05D006639 ORTHO05D008339 2.0e-31 139.8 128 64.1
FvH4_3g24950 Fragaria vesca HOM05D006639 ORTHO05D008339 3.4e-31 139.0 116 68.1
Sed0014981 Sechium edule HOM05D006639 ORTHO05D008339 3.4e-31 139.0 91 78.0
vmacro03320 Vaccinium macrocarpon HOM05D006639 ORTHO05D008339 3.4e-31 139.0 128 64.8
PSO384G2857 Papaver somniferum HOM05D006639 ORTHO05D008339 4.4e-31 138.7 113 65.5
Lj2A964T5 Lonicera japonica HOM05D006639 ORTHO05D008339 5.8e-31 138.3 98 73.5
THA.LOC104826426 Tarenaya hassleriana HOM05D006639 ORTHO05D008339 5.8e-31 138.3 114 64.0
ECA238G3612 Erigeron canadensis HOM05D006639 ORTHO05D008339 7.6e-31 137.9 111 71.2
Glyma.12G089400 Glycine max HOM05D006639 ORTHO05D008339 7.6e-31 137.9 114 65.8
Manes.11G162100 Manihot esculenta HOM05D006639 ORTHO05D008339 7.6e-31 137.9 122 63.1
Sc12g0004540 Simmondsia chinensis HOM05D006639 ORTHO05D008339 9.9e-31 137.5 113 64.6
Ah.15g095860 Amaranthus hybridus HOM05D006639 ORTHO05D008339 1.7e-30 136.7 125 62.4
Phvul.011G094600 Phaseolus vulgaris HOM05D006639 ORTHO05D008339 1.7e-30 136.7 117 65.8
MBI17_g08336_MAGBIO Magnolia biondii HOM05D006639 ORTHO05D008339 2.2e-30 136.3 151 56.3
VMungo1127G0544 Vigna mungo HOM05D006639 ORTHO05D008339 2.2e-30 136.3 117 64.1
Sabra09G0127600 Salix brachista HOM05D006639 ORTHO05D008339 2.9e-30 136.0 128 63.3
RcHm_v2.0_Chr5g0044741 Rosa chinensis HOM05D006639 ORTHO05D008339 3.8e-30 135.6 101 71.3
EL10Ac7g15828 Beta vulgaris HOM05D006639 ORTHO05D008339 6.4e-30 134.8 161 51.6
DCAR_010346 Daucus carota HOM05D006639 ORTHO05D008339 6.4e-30 134.8 115 67.0
A07p18230 Brassica napus HOM05D006639 ORTHO05D008339 8.4e-30 134.4 99 68.7
TWI31G0153 Tripterygium wilfordii HOM05D006639 ORTHO05D008339 8.4e-30 134.4 112 67.0
BraA07t29539Z Brassica rapa HOM05D006639 ORTHO05D008339 1.9e-29 133.3 99 67.7
Aa31LG5G8810 Aethionema arabicum HOM05D006639 ORTHO05D008339 2.4e-29 132.9 134 57.5
DCAR_006164 Daucus carota HOM05D006639 ORTHO05D008339 3.2e-29 132.5 97 74.2
Medtr4g052950 Medicago truncatula HOM05D006639 ORTHO05D008339 3.2e-29 132.5 153 54.9
CDE08G1389 Ceratophyllum demersum HOM05D006639 ORTHO05D008339 4.1e-29 132.1 154 52.6
HPP92_003216 Vanilla planifolia HOM05D006639 ORTHO05D008339 4.1e-29 132.1 139 56.1
BcaB02g10091 Brassica carinata HOM05D006639 ORTHO05D008339 5.4e-29 131.7 93 71.0
CiPaw.14G099800 Carya illinoinensis HOM05D006639 ORTHO05D008339 7.1e-29 131.3 111 65.8
BcaC02g10878 Brassica carinata HOM05D006639 ORTHO05D008339 1.2e-28 130.6 93 69.9
C04p24130 Brassica napus HOM05D006639 ORTHO05D008339 1.2e-28 130.6 93 69.9
BolC4t23910H Brassica oleracea HOM05D006639 ORTHO05D008339 1.2e-28 130.6 93 69.9
ATR0776G083 Amborella trichopoda HOM05D006639 ORTHO05D008339 1.6e-28 130.2 120 61.7
Sp4g10260 Schrenkiella parvula HOM05D006639 ORTHO05D008339 1.6e-28 130.2 110 62.7
Cfa010012 Carpinus fangiana HOM05D006639 ORTHO05D008339 3.5e-28 129.0 101 69.3
Os09g0568200 Oryza sativa ssp. japonica HOM05D006639 ORTHO05D008339 3.5e-28 129.0 116 60.3
Haze_23370 Corylus avellana HOM05D006639 ORTHO05D008339 4.6e-28 128.6 115 64.3
QL01p012190 Quercus lobata HOM05D006639 ORTHO05D008339 6.0e-28 128.3 118 62.7
Carub.0004s0810 Capsella rubella HOM05D006639 ORTHO05D008339 7.8e-28 127.9 114 59.6
AT2G27470 Arabidopsis thaliana HOM05D006639 ORTHO05D008339 1.0e-27 127.5 114 59.6
Prupe.6G130500 Prunus persica HOM05D006639 ORTHO05D008339 2.3e-27 126.3 136 60.3
Atru.BG.107.p Acer truncatum HOM05D006639 ORTHO05D008339 6.6e-27 124.8 85 74.1
AL4G21460 Arabidopsis lyrata HOM05D006639 ORTHO05D008339 6.6e-27 124.8 114 57.9
CARHR120120 Cardamine hirsuta HOM05D006639 ORTHO05D008339 6.6e-27 124.8 104 61.5
SEGI_32267 Sequoiadendron giganteum HOM05D006639 ORTHO05D008339 8.7e-27 124.4 109 60.6
Thhalv10017865m.g Eutrema salsugineum HOM05D006639 ORTHO05D008339 1.5e-26 123.6 104 63.5
Atru.chr3.3238 Acer truncatum HOM05D006639 ORTHO05D008339 7.3e-26 121.3 94 69.1
FAN11G3713 Fragaria x ananassa HOM05D006639 ORTHO05D008339 3.6e-25 119.0 120 60.0
Zm00001eb308280 Zea mays HOM05D006639 ORTHO05D008339 3.6e-25 119.0 124 53.2
BolC3t15529H Brassica oleracea HOM05D006639 ORTHO05D008339 6.2e-25 118.2 114 56.1
Mapoly0105s0006 Marchantia polymorpha HOM05D006639 ORTHO05D008339 8.1e-25 117.9 143 46.9
AagrBONN_evm.TU.Sc2ySwM_362.1778 Anthoceros agrestis HOM05D006639 ORTHO05D008339 1.8e-24 116.7 126 53.2
C03p31860 Brassica napus HOM05D006639 ORTHO05D008339 4.0e-24 115.5 114 55.3
BcaC01g04942 Brassica carinata HOM05D006639 ORTHO05D008339 5.2e-24 115.2 114 55.3
MD11G1164600 Malus domestica HOM05D006639 ORTHO05D008339 9.0e-24 114.4 98 65.3
Pp3c26_8280 Physcomitrium patens HOM05D006639 ORTHO05D008339 1.2e-23 114.0 123 52.0
BcaB01g03073 Brassica carinata HOM05D006639 ORTHO05D008339 1.5e-23 113.6 103 60.2
SMO340G0007 Selaginella moellendorffii HOM05D006639 ORTHO05D008339 9.9e-23 110.9 111 53.2
ECA238G0189 Erigeron canadensis HOM05D006639 ORTHO05D008339 7.1e-21 104.8 105 58.1
PRCOL_00006285 Prasinoderma coloniale HOM05D006639 ORTHO05D008339 1.9e-18 96.7 115 46.1
MCO15G204 Micromonas commoda HOM05D006639 ORTHO05D008339 1.8e-16 90.1 112 45.5
Cre07.g341800 Chlamydomonas reinhardtii HOM05D006639 ORTHO05D008339 4.0e-16 89.0 97 44.3
HanXRQChr16g0505691 Helianthus annuus HOM05D003169 ORTHO05D003700 1.8e-08 63.5 44 75.0
COL.COLO4_19857 Corchorus olitorius HOM05D006639 ORTHO05D008339 2.0e-07 60.1 52 61.5
Nn1g05220 Nelumbo nucifera HOM05D006639 ORTHO05D008339 5.8e-07 58.5 54 53.7
AUR62009752 Chenopodium quinoa HOM05D006639 ORTHO05D008339 3.8e-06 55.8 38 68.4
Nn1g05039 Nelumbo nucifera HOM05D006639 ORTHO05D008339 3.8e-06 55.8 51 54.9


User provided reference genes

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