Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g026660 Solanum pennellii HOM05D007994 ORTHO05D010092 1.9e-52 208.8 98 100.0
Solyc11g066940.2 Solanum lycopersicum HOM05D007994 ORTHO05D010092 2.1e-51 205.3 98 98.0
PGSC0003DMG400026538 Solanum tuberosum HOM05D007994 ORTHO05D010092 5.1e-45 184.1 116 80.2
Peaxi162Scf00002g05422 Petunia axillaris HOM05D007994 ORTHO05D010092 1.7e-27 125.9 79 70.9
Cc01_g09740 Coffea canephora HOM05D007994 ORTHO05D010092 6.1e-22 107.5 93 51.6
MSTRG.12356 Avicennia marina HOM05D007994 ORTHO05D010092 5.7e-20 100.9 92 52.2
TAR623G0693 Trochodendron aralioides HOM05D007994 ORTHO05D010092 5.7e-20 100.9 92 55.4
CsaV3_1G014550 Cucumis sativus L. HOM05D007994 ORTHO05D010092 1.7e-19 99.4 92 53.3
ClCG01G012620 Citrullus lanatus HOM05D007994 ORTHO05D010092 3.7e-19 98.2 92 53.3
Dinv12515 Davidia involucrata HOM05D007994 ORTHO05D010092 3.7e-19 98.2 95 52.6
CiPaw.13G140400 Carya illinoinensis HOM05D007994 ORTHO05D010092 1.1e-18 96.7 93 50.5
MELO3C004786.2 Cucumis melo HOM05D007994 ORTHO05D010092 1.1e-18 96.7 92 52.2
Nn2g14036 Nelumbo nucifera HOM05D007994 ORTHO05D010092 3.1e-18 95.1 89 51.7
QL01p013577 Quercus lobata HOM05D007994 ORTHO05D010092 4.1e-18 94.7 96 47.9
Thecc.09G290600 Theobroma cacao HOM05D007994 ORTHO05D010092 4.1e-18 94.7 93 51.6
Cfa010076 Carpinus fangiana HOM05D007994 ORTHO05D010092 1.2e-17 93.2 97 47.4
Duzib168G2077 Durio zibethinus HOM05D007994 ORTHO05D010092 1.2e-17 93.2 96 49.0
Manes.11G158100 Manihot esculenta HOM05D007994 ORTHO05D010092 2.0e-17 92.4 94 50.0
PSO339G3278 Papaver somniferum HOM05D007994 ORTHO05D010092 2.6e-17 92.0 92 48.9
Duzib170G0069 Durio zibethinus HOM05D007994 ORTHO05D010092 3.5e-17 91.7 94 50.0
COL.COLO4_19306 Corchorus olitorius HOM05D007994 ORTHO05D010092 4.5e-17 91.3 94 47.9
GSVIVG01031390001 Vitis vinifera HOM05D007994 ORTHO05D010092 4.5e-17 91.3 97 47.4
Gohir.A09G093700 Gossypium hirsutum HOM05D007994 ORTHO05D010092 5.9e-17 90.9 94 47.9
Gohir.D09G093400 Gossypium hirsutum HOM05D007994 ORTHO05D010092 7.7e-17 90.5 94 46.8
Aqoxy4G02880 Aquilegia oxysepala HOM05D007994 ORTHO05D010092 1.3e-16 89.7 99 48.5
Haze_23442 Corylus avellana HOM05D007994 ORTHO05D010092 2.2e-16 89.0 68 55.9
Sed0020093 Sechium edule HOM05D007994 ORTHO05D010092 3.8e-16 88.2 89 49.4
vmacro14359 Vaccinium macrocarpon HOM05D007994 ORTHO05D010092 5.0e-16 87.8 94 50.0
MD03G1135900 Malus domestica HOM05D007994 ORTHO05D010092 1.9e-15 85.9 91 49.5
Atru.chr3.3364 Acer truncatum HOM05D007994 ORTHO05D010092 2.5e-15 85.5 87 46.0
THA.LOC104814803 Tarenaya hassleriana HOM05D007994 ORTHO05D010092 4.2e-15 84.7 89 48.3
Gorai.006G110000 Gossypium raimondii HOM05D007994 ORTHO05D010092 5.5e-15 84.3 69 52.2
PSO384G4503 Papaver somniferum HOM05D007994 ORTHO05D010092 5.5e-15 84.3 64 57.8
TWI75G1300 Tripterygium wilfordii HOM05D007994 ORTHO05D010092 5.5e-15 84.3 90 45.6
Actinidia35451 Actinidia chinensis HOM05D000078 ORTHO05D010092 7.2e-15 84.0 67 56.7
Sabra09G0116600 Salix brachista HOM05D007994 ORTHO05D010092 1.2e-14 83.2 93 45.2
Rhsim01G0207500 Rhododendron simsii HOM05D007994 ORTHO05D010092 2.1e-14 82.4 66 54.5
Potri.009G148200 Populus trichocarpa HOM05D007994 ORTHO05D010092 3.6e-14 81.6 93 44.1
Migut.N02511 Erythranthe guttata HOM05D007994 ORTHO05D010092 1.4e-13 79.7 77 50.6
VMungo1127G0625 Vigna mungo HOM05D007994 ORTHO05D010092 1.8e-13 79.3 87 42.5
CANSAT54G1189 Cannabis sativa HOM05D007994 ORTHO05D010092 3.0e-13 78.6 66 51.5
Phvul.011G091200 Phaseolus vulgaris HOM05D007994 ORTHO05D010092 5.2e-13 77.8 88 40.9
Prupe.6G120200 Prunus persica HOM05D007994 ORTHO05D010092 5.2e-13 77.8 93 44.1
Ciclev10029500m.g Citrus clementina HOM05D007994 ORTHO05D010092 1.2e-12 76.6 101 38.6
Oeu058281.1 Olea europaea HOM05D007994 ORTHO05D010092 1.2e-12 76.6 60 56.7
Eucgr.J00433 Eucalyptus grandis HOM05D007994 ORTHO05D010092 1.5e-12 76.3 79 48.1
Glyma.11G188500 Glycine max HOM05D007994 ORTHO05D010092 1.5e-12 76.3 88 42.0
PGR119G1356 Punica granatum HOM05D007994 ORTHO05D010092 2.0e-12 75.9 82 45.1
SalBow3G1236 Salvia bowleyana HOM05D007994 ORTHO05D010092 1.3e-11 73.2 62 51.6
RcHm_v2.0_Chr5g0054991 Rosa chinensis HOM05D007994 ORTHO05D010092 2.2e-11 72.4 92 42.4
Lalb_Chr19g0136731 Lupinus albus HOM05D007994 ORTHO05D010092 1.8e-10 69.3 86 36.0
Rhsim12G0093900 Rhododendron simsii HOM05D007994 ORTHO05D010092 2.4e-10 68.9 59 52.5
ATR0820G083 Amborella trichopoda HOM05D007994 ORTHO05D010092 7.0e-10 67.4 54 51.9
Phvul.005G126500 Phaseolus vulgaris HOM05D007994 ORTHO05D010092 7.0e-10 67.4 89 42.7
VMungo1080G0008 Vigna mungo HOM05D007994 ORTHO05D010092 9.1e-10 67.0 65 49.2
FAN16G1405 Fragaria x ananassa HOM05D007994 ORTHO05D010092 4.5e-09 64.7 90 40.0
TPR.G15591 Trifolium pratense HOM05D007994 ORTHO05D010092 5.9e-09 64.3 56 57.1
BcaC01g02012 Brassica carinata HOM05D007994 ORTHO05D010092 2.9e-08 62.0 82 45.1
C03p69540 Brassica napus HOM05D007994 ORTHO05D010092 2.9e-08 62.0 82 45.1
BolC3t19209H Brassica oleracea HOM05D007994 ORTHO05D010092 2.9e-08 62.0 82 45.1
BcaB01g01144 Brassica carinata HOM05D007994 ORTHO05D010092 3.8e-08 61.6 70 47.1
Carub.0015s0006 Capsella rubella HOM05D007994 ORTHO05D010092 8.5e-08 60.5 58 44.8
AT3G44716 Arabidopsis thaliana HOM05D007994 ORTHO05D010092 1.5e-07 59.7 71 42.3
A06p21760 Brassica napus HOM05D007994 ORTHO05D010092 1.5e-07 59.7 85 43.5
BraA06t25263Z Brassica rapa HOM05D007994 ORTHO05D010092 1.5e-07 59.7 85 43.5
Carub.0005s1038 Capsella rubella HOM05D007994 ORTHO05D010092 1.5e-07 59.7 58 44.8
Lj3g0008283 Lotus japonicus HOM05D007994 ORTHO05D010092 1.5e-07 59.7 87 39.1
AL5G22890 Arabidopsis lyrata HOM05D007994 ORTHO05D010092 1.9e-07 59.3 76 40.8
SEGI_15329 Sequoiadendron giganteum HOM05D007994 ORTHO05D010092 3.2e-07 58.5 86 38.4
Medtr4g055130 Medicago truncatula HOM05D007994 ORTHO05D010092 7.2e-07 57.4 55 50.9
Sp5g16480 Schrenkiella parvula HOM05D007994 ORTHO05D010092 9.4e-07 57.0 69 44.9


User provided reference genes

Program Settings