Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g066690.2 Solanum lycopersicum HOM05D007233 ORTHO05D009043 1.8e-72 275.8 139 100.0
Sopen11g026420 Solanum pennellii HOM05D007233 ORTHO05D009043 1.8e-72 275.8 139 100.0
PGSC0003DMG400000464 Solanum tuberosum HOM05D007233 ORTHO05D009043 1.0e-70 270.0 139 97.1
CAN.G644.46 Capsicum annuum HOM05D007233 ORTHO05D009043 1.7e-62 242.7 139 87.8
Peaxi162Scf00150g00710 Petunia axillaris HOM05D007233 ORTHO05D009043 2.0e-55 219.2 139 76.3
Nitab4.5_0000442g0180 Nicotiana tabacum HOM05D007233 ORTHO05D009043 3.6e-52 208.4 140 75.7
GSVIVG01031420001 Vitis vinifera HOM05D007233 ORTHO05D009043 4.1e-48 194.9 139 71.2
Migut.N02527 Erythranthe guttata HOM05D007233 ORTHO05D009043 1.0e-46 190.3 141 70.2
CSS0019792 Camellia sinensis var. sinensis HOM05D007233 ORTHO05D009043 3.9e-46 188.3 141 67.4
SalBow3G1176 Salvia bowleyana HOM05D007233 ORTHO05D009043 3.3e-45 185.3 142 66.2
MSTRG.17742 Avicennia marina HOM05D007233 ORTHO05D009043 1.6e-44 183.0 142 66.2
Manes.04G010800 Manihot esculenta HOM05D007233 ORTHO05D009043 2.1e-44 182.6 138 68.1
COL.COLO4_31139 Corchorus olitorius HOM05D007233 ORTHO05D009043 2.8e-44 182.2 138 65.2
Thecc.09G294400 Theobroma cacao HOM05D007233 ORTHO05D009043 4.7e-44 181.4 138 65.9
Gohir.D13G228300 Gossypium hirsutum HOM05D007233 ORTHO05D009043 6.2e-44 181.0 138 64.5
Potri.004G190200 Populus trichocarpa HOM05D007233 ORTHO05D009043 9.8e-42 173.7 138 65.9
Cc01_g10010 Coffea canephora HOM05D007233 ORTHO05D009043 4.9e-41 171.4 141 61.0
SGA_v2.0_scaffold93G28323 Striga asiatica HOM05D007233 ORTHO05D009043 4.9e-41 171.4 146 62.3
Sabra04G0127900 Salix brachista HOM05D007233 ORTHO05D009043 6.4e-41 171.0 138 64.5
TAR369G0714 Trochodendron aralioides HOM05D007233 ORTHO05D009043 6.4e-41 171.0 139 63.3
unitig_699.g19183 Utricularia gibba HOM05D007233 ORTHO05D009043 8.3e-41 170.6 137 62.0
DCAR_015489 Daucus carota HOM05D007233 ORTHO05D009043 3.2e-40 168.7 139 60.4
QL01p014111 Quercus lobata HOM05D007233 ORTHO05D009043 3.2e-40 168.7 134 64.9
THA.LOC104826400 Tarenaya hassleriana HOM05D007233 ORTHO05D009043 4.1e-40 168.3 138 56.5
VMungo1127G1048 Vigna mungo HOM05D007233 ORTHO05D009043 4.1e-40 168.3 138 63.0
Phvul.011G088600 Phaseolus vulgaris HOM05D007233 ORTHO05D009043 5.4e-40 167.9 138 63.0
Lj3g0012043 Lotus japonicus HOM05D007233 ORTHO05D009043 7.0e-40 167.5 138 63.8
EL10Ac9g21047 Beta vulgaris HOM05D007233 ORTHO05D009043 9.2e-40 167.2 143 58.0
Hund07722 Selenicereus undatus HOM05D007233 ORTHO05D009043 2.7e-39 165.6 139 61.2
Gohir.A13G223500 Gossypium hirsutum HOM05D007233 ORTHO05D009043 3.5e-39 165.2 138 61.6
Lsat_1_v5_gn_1_61521 Lactuca sativa HOM05D007233 ORTHO05D009043 4.6e-39 164.9 139 59.0
Ca_10766_v3 Cicer arietinum L. HOM05D007233 ORTHO05D009043 7.8e-39 164.1 138 60.9
Glyma.11G190700 Glycine max HOM05D007233 ORTHO05D009043 1.0e-38 163.7 143 58.7
SHI05395 Sapria himalayana HOM05D007233 ORTHO05D009043 1.0e-38 163.7 138 58.7
vmacro03232 Vaccinium macrocarpon HOM05D007233 ORTHO05D009043 1.7e-38 162.9 134 61.9
BcaB07g34087 Brassica carinata HOM05D007233 ORTHO05D009043 2.3e-38 162.5 138 56.5
C05p06530 Brassica napus HOM05D007233 ORTHO05D009043 2.3e-38 162.5 138 56.5
BolC5t29413H Brassica oleracea HOM05D007233 ORTHO05D009043 2.3e-38 162.5 138 56.5
Rhsim13G0103700 Rhododendron simsii HOM05D007233 ORTHO05D009043 2.3e-38 162.5 134 59.7
A06p05410 Brassica napus HOM05D007233 ORTHO05D009043 3.0e-38 162.2 138 56.5
BraA06t23750Z Brassica rapa HOM05D007233 ORTHO05D009043 3.0e-38 162.2 138 56.5
Aa31LG1G6480 Aethionema arabicum HOM05D007233 ORTHO05D009043 6.6e-38 161.0 140 55.0
Lalb_Chr03g0027851 Lupinus albus HOM05D007233 ORTHO05D009043 1.1e-37 160.2 138 60.9
CARHR008260 Cardamine hirsuta HOM05D007233 ORTHO05D009043 1.5e-37 159.8 140 55.0
PGR119G2223 Punica granatum HOM05D007233 ORTHO05D009043 1.5e-37 159.8 137 59.9
Sp1g07040 Schrenkiella parvula HOM05D007233 ORTHO05D009043 2.5e-37 159.1 138 55.1
Duzib170G0414 Durio zibethinus HOM05D007233 ORTHO05D009043 3.3e-37 158.7 138 60.9
TPR.G32017 Trifolium pratense HOM05D007233 ORTHO05D009043 3.3e-37 158.7 139 60.4
AT1G08390 Arabidopsis thaliana HOM05D007233 ORTHO05D009043 7.3e-37 157.5 138 55.8
AUR62031769 Chenopodium quinoa HOM05D007233 ORTHO05D009043 7.3e-37 157.5 146 58.2
Medtr4g056300 Medicago truncatula HOM05D007233 ORTHO05D009043 7.3e-37 157.5 138 61.6
Aqoxy1G01014 Aquilegia oxysepala HOM05D007233 ORTHO05D009043 9.5e-37 157.1 136 58.1
HanXRQChr11g0345871 Helianthus annuus HOM05D007233 ORTHO05D009043 1.2e-36 156.8 138 56.5
AL1G18800 Arabidopsis lyrata HOM05D007233 ORTHO05D009043 1.6e-36 156.4 138 54.3
Dinv29405 Davidia involucrata HOM05D007233 ORTHO05D009043 1.6e-36 156.4 173 52.0
Carub.0001s0774 Capsella rubella HOM05D007233 ORTHO05D009043 2.1e-36 156.0 138 54.3
Sed0016181 Sechium edule HOM05D007233 ORTHO05D009043 2.1e-36 156.0 138 56.5
ATR0665G357 Amborella trichopoda HOM05D007233 ORTHO05D009043 3.6e-36 155.2 133 59.4
Ciclev10030019m.g Citrus clementina HOM05D007233 ORTHO05D009043 3.6e-36 155.2 139 56.8
Thhalv10009077m.g Eutrema salsugineum HOM05D007233 ORTHO05D009043 3.6e-36 155.2 138 54.3
ClCG01G013980 Citrullus lanatus HOM05D007233 ORTHO05D009043 1.1e-35 153.7 138 56.5
MELO3C004843.2 Cucumis melo HOM05D007233 ORTHO05D009043 1.8e-35 152.9 138 56.5
Haze_23494 Corylus avellana HOM05D007233 ORTHO05D009043 4.0e-35 151.8 141 57.4
arahy.Tifrunner.gnm1.ann1.5NF9YD Arachis hypogaea HOM05D007233 ORTHO05D009043 1.2e-34 150.2 159 54.1
CiPaw.14G104900 Carya illinoinensis HOM05D007233 ORTHO05D009043 1.5e-34 149.8 141 56.7
ECA248G0451 Erigeron canadensis HOM05D007233 ORTHO05D009043 3.4e-34 148.7 139 53.2
CsaV3_1G014310 Cucumis sativus L. HOM05D007233 ORTHO05D009043 9.8e-34 147.1 138 53.6
Eucgr.F03331 Eucalyptus grandis HOM05D007233 ORTHO05D009043 9.8e-34 147.1 146 54.1
CANSAT78G0435 Cannabis sativa HOM05D007233 ORTHO05D009043 4.9e-33 144.8 138 53.6
Prupe.6G116400 Prunus persica HOM05D007233 ORTHO05D009043 4.9e-33 144.8 138 56.5
FvH4_3g30010 Fragaria vesca HOM05D007233 ORTHO05D009043 4.1e-32 141.7 138 53.6
Ah.01g016160 Amaranthus hybridus HOM05D007233 ORTHO05D009043 5.4e-32 141.4 149 52.3
FAN25G1956 Fragaria x ananassa HOM05D007233 ORTHO05D009043 1.6e-31 139.8 138 52.9
FAN21G0394 Fragaria x ananassa HOM05D007233 ORTHO05D009043 2.1e-31 139.4 138 53.6
MD11G1153700 Malus domestica HOM05D007233 ORTHO05D009043 4.6e-31 138.3 137 54.0
MBI04_g22192_MAGBIO Magnolia biondii HOM05D007233 ORTHO05D009043 8.6e-30 134.0 109 61.5
PSO063G0378 Papaver somniferum HOM05D007233 ORTHO05D009043 1.9e-29 132.9 139 51.1
Atru.chr3.3421 Acer truncatum HOM05D007233 ORTHO05D009043 4.3e-29 131.7 97 64.9
PSO339G4613 Papaver somniferum HOM05D007233 ORTHO05D009043 4.3e-29 131.7 139 51.1
RcHm_v2.0_Chr5g0055931 Rosa chinensis HOM05D007233 ORTHO05D009043 7.3e-29 131.0 139 52.5
Pp3c26_4940 Physcomitrium patens HOM05D007233 ORTHO05D009043 3.7e-25 118.6 137 48.9
Pp3c26_4950 Physcomitrium patens HOM05D007233 ORTHO05D009043 3.7e-25 118.6 137 48.9
Os03g0684300 Oryza sativa ssp. japonica HOM05D007233 ORTHO05D009043 2.4e-24 115.9 140 47.1
Gorai.013G259000 Gossypium raimondii HOM05D007233 ORTHO05D009043 4.1e-24 115.2 122 53.3
Nn6g35132 Nelumbo nucifera HOM05D007233 ORTHO05D009043 7.1e-24 114.4 84 60.7
Zm00001eb053200 Zea mays HOM05D007233 ORTHO05D009043 7.8e-23 110.9 146 48.6
TWI31G0123 Tripterygium wilfordii HOM05D007233 ORTHO05D009043 1.5e-21 106.7 124 52.4
Cpa.g.sc47.40 Carica papaya HOM05D007233 ORTHO05D009043 1.9e-21 106.3 104 54.8
Psat0s3169g0040 Pisum sativum HOM05D007233 ORTHO05D009043 4.3e-21 105.1 102 56.9
Cfa010203 Carpinus fangiana HOM05D007233 ORTHO05D009043 1.1e-19 100.5 98 55.1
arahy.Tifrunner.gnm1.ann1.9UEW9D Arachis hypogaea HOM05D007233 ORTHO05D009043 4.0e-19 98.6 126 50.0
ClCG08G000500 Citrullus lanatus HOM05D007233 ORTHO05D009043 6.8e-19 97.8 104 51.0
Cfa020420 Carpinus fangiana HOM05D007233 ORTHO05D009043 8.9e-19 97.4 95 51.6
Mapoly0016s0182 Marchantia polymorpha HOM05D007233 ORTHO05D009043 7.6e-18 94.4 136 41.2
Haze_23472 Corylus avellana HOM05D007233 ORTHO05D009043 9.9e-18 94.0 139 46.0
Haze_23491 Corylus avellana HOM05D007233 ORTHO05D009043 1.7e-17 93.2 148 41.2
Haze_23479 Corylus avellana HOM05D007233 ORTHO05D009043 6.4e-17 91.3 94 51.1
Sc12g0003860 Simmondsia chinensis HOM05D007233 ORTHO05D009043 1.4e-16 90.1 83 57.8
Oeu035529.3 Olea europaea HOM05D007233 ORTHO05D009043 1.2e-15 87.0 84 58.3
CDE02G1642 Ceratophyllum demersum HOM05D007233 ORTHO05D009043 1.0e-14 84.0 86 52.3
AagrBONN_evm.TU.Sc2ySwM_344.3909 Anthoceros agrestis HOM05D007233 ORTHO05D009043 1.9e-13 79.7 110 40.9
Oeu000616.2 Olea europaea HOM05D007233 ORTHO05D009043 2.9e-09 65.9 70 52.9
Haze_23488 Corylus avellana HOM05D007233 ORTHO05D009043 1.4e-08 63.5 81 45.7
arahy.Tifrunner.gnm1.ann1.3ZRX2Z Arachis hypogaea HOM05D007233 ORTHO05D009043 1.0e-06 57.4 59 55.9
Duzib168G0428 Durio zibethinus HOM05D007233 ORTHO05D009043 1.0e-06 57.4 108 38.0


User provided reference genes

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