Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g026160 Solanum pennellii HOM05D006252 ORTHO05D007909 6.0e-98 360.9 193 100.0
Solyc11g066410.2 Solanum lycopersicum HOM05D006252 ORTHO05D007909 6.7e-97 357.5 193 98.4
PGSC0003DMG400000456 Solanum tuberosum HOM05D006252 ORTHO05D007909 5.6e-96 354.4 193 97.4
Nitab4.5_0005665g0020 Nicotiana tabacum HOM05D006252 ORTHO05D007909 1.5e-80 303.1 193 83.4
Peaxi162Scf00983g00015 Petunia axillaris HOM05D006252 ORTHO05D007909 7.4e-80 300.8 188 84.6
Migut.D02295 Erythranthe guttata HOM05D006252 ORTHO05D007909 2.0e-77 292.7 192 80.7
Nitab4.5_0000173g0140 Nicotiana tabacum HOM05D006252 ORTHO05D007909 1.3e-76 290.0 185 83.2
Cc01_g10250 Coffea canephora HOM05D006252 ORTHO05D007909 1.6e-74 283.1 191 78.5
Cc08_g04460 Coffea canephora HOM05D006252 ORTHO05D007909 2.1e-74 282.7 191 78.0
Hma1.2p1_0051F.1_g029510 Hydrangea macrophylla HOM05D006252 ORTHO05D007909 4.6e-74 281.6 191 77.0
Cpa.g.sc47.1 Carica papaya HOM05D006252 ORTHO05D007909 1.4e-73 280.0 190 76.8
SalBow6G6884 Salvia bowleyana HOM05D006252 ORTHO05D007909 8.8e-73 277.3 207 72.0
MSTRG.18705 Avicennia marina HOM05D006252 ORTHO05D007909 9.7e-72 273.9 191 73.3
Ciclev10029219m.g Citrus clementina HOM05D006252 ORTHO05D007909 9.7e-72 273.9 191 75.9
CiPaw.13G122300 Carya illinoinensis HOM05D006252 ORTHO05D007909 1.3e-71 273.5 191 75.9
Nn6g35212 Nelumbo nucifera HOM05D006252 ORTHO05D007909 1.3e-71 273.5 191 77.0
CSS0004051 Camellia sinensis var. sinensis HOM05D006252 ORTHO05D007909 1.7e-71 273.1 191 75.9
CSS0044427 Camellia sinensis var. sinensis HOM05D006252 ORTHO05D007909 1.7e-71 273.1 191 75.9
Thecc.09G298300 Theobroma cacao HOM05D006252 ORTHO05D007909 1.7e-71 273.1 186 76.3
TAR633G0073 Trochodendron aralioides HOM05D006252 ORTHO05D007909 2.8e-71 272.3 191 75.4
QL01p014977 Quercus lobata HOM05D006252 ORTHO05D007909 1.1e-70 270.4 190 75.3
Atru.chr3.3505 Acer truncatum HOM05D006252 ORTHO05D007909 1.8e-70 269.6 191 75.9
Gorai.009G090100 Gossypium raimondii HOM05D006252 ORTHO05D007909 1.8e-70 269.6 186 75.8
Thhalv10002672m.g Eutrema salsugineum HOM05D006252 ORTHO05D007909 4.1e-70 268.5 191 73.8
BcaB05g23061 Brassica carinata HOM05D006252 ORTHO05D007909 5.3e-70 268.1 192 73.4
BcaC09g49661 Brassica carinata HOM05D006252 ORTHO05D007909 5.3e-70 268.1 192 73.4
C01p34110 Brassica napus HOM05D006252 ORTHO05D007909 5.3e-70 268.1 192 73.4
BolC1t03381H Brassica oleracea HOM05D006252 ORTHO05D007909 5.3e-70 268.1 192 73.4
Gohir.D05G088000 Gossypium hirsutum HOM05D006252 ORTHO05D007909 5.3e-70 268.1 186 75.3
SGA_v2.0_scaffold277G46698 Striga asiatica HOM05D006252 ORTHO05D007909 5.3e-70 268.1 192 70.8
THA.LOC104810882 Tarenaya hassleriana HOM05D006252 ORTHO05D007909 5.3e-70 268.1 191 72.8
Manes.11G152500 Manihot esculenta HOM05D006252 ORTHO05D007909 6.9e-70 267.7 191 74.3
AL5G23350 Arabidopsis lyrata HOM05D006252 ORTHO05D007909 9.1e-70 267.3 191 72.8
Sp5g16320 Schrenkiella parvula HOM05D006252 ORTHO05D007909 1.2e-69 266.9 191 73.3
Gohir.A05G086700 Gossypium hirsutum HOM05D006252 ORTHO05D007909 1.5e-69 266.5 173 78.0
Sed0008981 Sechium edule HOM05D006252 ORTHO05D007909 1.5e-69 266.5 191 72.8
A01p26720 Brassica napus HOM05D006252 ORTHO05D007909 2.6e-69 265.8 192 72.9
BraA01t02602Z Brassica rapa HOM05D006252 ORTHO05D007909 2.6e-69 265.8 192 72.9
CDE08G0788 Ceratophyllum demersum HOM05D006252 ORTHO05D007909 3.4e-69 265.4 191 73.8
Glyma.12G081500 Glycine max HOM05D006252 ORTHO05D007909 5.9e-69 264.6 188 72.3
Aqoxy1G01090 Aquilegia oxysepala HOM05D006252 ORTHO05D007909 7.7e-69 264.2 191 74.9
Lj2A1006G34 Lonicera japonica HOM05D006252 ORTHO05D007909 7.7e-69 264.2 193 74.6
AUR62014977 Chenopodium quinoa HOM05D006252 ORTHO05D007909 1.0e-68 263.8 197 73.6
HanXRQChr02g0055341 Helianthus annuus HOM05D006252 ORTHO05D007909 1.0e-68 263.8 191 71.7
Actinidia07187 Actinidia chinensis HOM05D006252 ORTHO05D007909 1.7e-68 263.1 191 72.3
PSO063G5667 Papaver somniferum HOM05D006252 ORTHO05D007909 1.7e-68 263.1 192 72.4
arahy.Tifrunner.gnm1.ann1.Q498P0 Arachis hypogaea HOM05D006252 ORTHO05D007909 2.2e-68 262.7 188 74.5
Aa31LG4G14200 Aethionema arabicum HOM05D006252 ORTHO05D007909 2.9e-68 262.3 192 71.4
CARHR151120 Cardamine hirsuta HOM05D006252 ORTHO05D007909 2.9e-68 262.3 192 71.9
CDE02G0854 Ceratophyllum demersum HOM05D006252 ORTHO05D007909 2.9e-68 262.3 191 73.3
AUR62029150 Chenopodium quinoa HOM05D006252 ORTHO05D007909 2.9e-68 262.3 197 72.6
Cfa010288 Carpinus fangiana HOM05D006252 ORTHO05D007909 3.8e-68 261.9 191 75.9
Potri.004G217000 Populus trichocarpa HOM05D006252 ORTHO05D007909 3.8e-68 261.9 175 76.6
COL.COLO4_19198 Corchorus olitorius HOM05D006252 ORTHO05D007909 5.0e-68 261.5 186 73.1
Glyma.11G192500 Glycine max HOM05D006252 ORTHO05D007909 5.0e-68 261.5 189 73.0
PSO339G3106 Papaver somniferum HOM05D006252 ORTHO05D007909 8.5e-68 260.8 192 71.4
EL10Ac9g22626 Beta vulgaris HOM05D006252 ORTHO05D007909 1.1e-67 260.4 162 83.3
AT3G44890 Arabidopsis thaliana HOM05D006252 ORTHO05D007909 1.9e-67 259.6 192 70.3
unitig_746.g26615 Utricularia gibba HOM05D006252 ORTHO05D007909 1.9e-67 259.6 188 71.8
ClCG03G002460 Citrullus lanatus HOM05D006252 ORTHO05D007909 4.2e-67 258.5 191 70.7
Lsat_1_v5_gn_6_43381 Lactuca sativa HOM05D006252 ORTHO05D007909 5.5e-67 258.1 185 73.0
arahy.Tifrunner.gnm1.ann1.4A8W5C Arachis hypogaea HOM05D006252 ORTHO05D007909 7.2e-67 257.7 188 73.4
Carub.0005s1063 Capsella rubella HOM05D006252 ORTHO05D007909 7.2e-67 257.7 191 69.6
Sabra04G0147700 Salix brachista HOM05D006252 ORTHO05D007909 7.2e-67 257.7 191 71.7
CsaV3_1G013140 Cucumis sativus L. HOM05D006252 ORTHO05D007909 9.4e-67 257.3 191 69.6
MD03G1128600 Malus domestica HOM05D006252 ORTHO05D007909 9.4e-67 257.3 191 72.3
GSVIVG01031460001 Vitis vinifera HOM05D006252 ORTHO05D007909 9.4e-67 257.3 162 79.6
VMungo1127G0830 Vigna mungo HOM05D006252 ORTHO05D007909 1.2e-66 256.9 188 72.9
MELO3C004995.2 Cucumis melo HOM05D006252 ORTHO05D007909 2.1e-66 256.1 191 70.2
Prupe.6G113200 Prunus persica HOM05D006252 ORTHO05D007909 2.1e-66 256.1 191 72.3
MD11G1148800 Malus domestica HOM05D006252 ORTHO05D007909 2.7e-66 255.8 191 72.3
Sabra09G0002100 Salix brachista HOM05D006252 ORTHO05D007909 2.7e-66 255.8 191 70.7
PGR102G1698 Punica granatum HOM05D006252 ORTHO05D007909 1.4e-65 253.4 192 70.8
Medtr4g057210 Medicago truncatula HOM05D006252 ORTHO05D007909 1.8e-65 253.1 194 72.2
vmacro14388 Vaccinium macrocarpon HOM05D006252 ORTHO05D007909 3.9e-65 251.9 191 69.1
FAN16G0084 Fragaria x ananassa HOM05D006252 ORTHO05D007909 5.1e-65 251.5 191 68.6
RcHm_v2.0_Chr5g0056671 Rosa chinensis HOM05D006252 ORTHO05D007909 5.1e-65 251.5 191 68.6
FvH4_3g30600 Fragaria vesca HOM05D006252 ORTHO05D007909 6.7e-65 251.1 191 68.6
FAN11G0619 Fragaria x ananassa HOM05D006252 ORTHO05D007909 6.7e-65 251.1 191 68.6
MBI02_g05768_MAGBIO Magnolia biondii HOM05D006252 ORTHO05D007909 6.7e-65 251.1 150 85.3
Phvul.011G086500 Phaseolus vulgaris HOM05D006252 ORTHO05D007909 6.7e-65 251.1 170 75.3
ATR0043G002 Amborella trichopoda HOM05D006252 ORTHO05D007909 8.8e-65 250.8 162 79.0
FAN21G1285 Fragaria x ananassa HOM05D006252 ORTHO05D007909 8.8e-65 250.8 191 68.1
HPP92_003365 Vanilla planifolia HOM05D006252 ORTHO05D007909 8.8e-65 250.8 188 68.6
FAN25G2218 Fragaria x ananassa HOM05D006252 ORTHO05D007909 1.1e-64 250.4 191 68.1
TWI79G1340 Tripterygium wilfordii HOM05D006252 ORTHO05D007909 2.0e-64 249.6 172 73.3
Lj3g0021853 Lotus japonicus HOM05D006252 ORTHO05D007909 2.6e-64 249.2 188 70.7
TWI75G0936 Tripterygium wilfordii HOM05D006252 ORTHO05D007909 2.6e-64 249.2 172 74.4
Ca_19323_v3 Cicer arietinum L. HOM05D006252 ORTHO05D007909 5.7e-64 248.1 194 68.6
ECA233G2302 Erigeron canadensis HOM05D006252 ORTHO05D007909 7.4e-64 247.7 198 69.7
Rhsim01G0210400 Rhododendron simsii HOM05D006252 ORTHO05D007909 7.4e-64 247.7 191 67.5
TPR.G36832 Trifolium pratense HOM05D006252 ORTHO05D007909 2.8e-63 245.7 187 70.6
Lalb_Chr19g0136901 Lupinus albus HOM05D006252 ORTHO05D007909 3.7e-63 245.4 193 67.4
Hund01525 Selenicereus undatus HOM05D006252 ORTHO05D007909 8.2e-63 244.2 185 69.7
Psat7g223760 Pisum sativum HOM05D006252 ORTHO05D007909 2.4e-62 242.7 194 68.0
Lalb_Chr03g0027721 Lupinus albus HOM05D006252 ORTHO05D007909 3.1e-62 242.3 193 65.8
Zm00001eb258190 Zea mays HOM05D006252 ORTHO05D007909 5.5e-59 231.5 167 69.5
Dinv16227 Davidia involucrata HOM05D006252 ORTHO05D007909 5.2e-57 224.9 148 77.7
Mapoly0005s0034 Marchantia polymorpha HOM05D006252 ORTHO05D007909 3.4e-48 195.7 166 59.0
AagrBONN_evm.TU.Sc2ySwM_362.2261 Anthoceros agrestis HOM05D006252 ORTHO05D007909 2.4e-46 189.5 173 55.5
CBR_g36656 Chara braunii HOM05D006252 ORTHO05D007909 2.1e-42 176.4 156 57.1
Haze_24363 Corylus avellana HOM05D006252 ORTHO05D007909 5.2e-41 171.8 105 83.8
Sc21g0000330 Simmondsia chinensis HOM05D006252 ORTHO05D007909 2.6e-40 169.5 136 67.6
Pp3c1_5300 Physcomitrium patens HOM05D006252 ORTHO05D007909 2.4e-38 162.9 183 46.4
Pp3c1_5320 Physcomitrium patens HOM05D006252 ORTHO05D007909 2.4e-38 162.9 183 46.4
SMO118G0111 Selaginella moellendorffii HOM05D006252 ORTHO05D007909 7.0e-38 161.4 161 49.7
arahy.Tifrunner.gnm1.ann1.151HRH Arachis hypogaea HOM05D006252 ORTHO05D007909 9.1e-38 161.0 103 81.6
Thhalv10023194m.g Eutrema salsugineum HOM05D006252 ORTHO05D007909 1.2e-37 160.6 102 82.4
Pp3c2_34110 Physcomitrium patens HOM05D006252 ORTHO05D007909 1.6e-37 160.2 183 45.9
Pp3c2_34120 Physcomitrium patens HOM05D006252 ORTHO05D007909 1.6e-37 160.2 183 45.9
Oeu007732.1 Olea europaea HOM05D006252 ORTHO05D007909 5.9e-37 158.3 94 86.2
arahy.Tifrunner.gnm1.ann1.RBN82M Arachis hypogaea HOM05D006252 ORTHO05D007909 1.0e-33 147.5 103 74.8
Actinidia24149 Actinidia chinensis HOM05D006252 ORTHO05D007909 1.4e-30 137.1 114 66.7
arahy.Tifrunner.gnm1.ann1.EI3IVH Arachis hypogaea HOM05D006252 ORTHO05D007909 2.9e-28 129.4 90 75.6
SEGI_37172 Sequoiadendron giganteum HOM05D006252 ORTHO05D007909 1.2e-24 117.5 86 66.3
Oeu007731.1 Olea europaea HOM05D006252 ORTHO05D007909 3.7e-23 112.5 87 65.5
arahy.Tifrunner.gnm1.ann1.8D185T Arachis hypogaea HOM05D006252 ORTHO05D005826 1.4e-22 110.5 71 80.3
Cre12.g556050 Chlamydomonas reinhardtii HOM05D006252 ORTHO05D007909 2.0e-21 106.7 166 35.5
MCO03G269 Micromonas commoda HOM05D006252 ORTHO05D007909 4.6e-21 105.5 161 36.0
Haze_24362 Corylus avellana HOM05D006252 ORTHO05D007909 1.4e-17 94.0 87 64.4
PRCOL_00001763 Prasinoderma coloniale HOM05D006252 ORTHO05D007909 5.2e-17 92.0 164 31.7
arahy.Tifrunner.gnm1.ann1.KIT0HG Arachis hypogaea HOM05D006252 ORTHO05D007909 6.8e-17 91.7 88 58.0
Ca_29226_v3 Cicer arietinum L. HOM05D006252 ORTHO05D008725 6.0e-13 78.6 156 32.7
SEGI_26717 Sequoiadendron giganteum HOM05D006252 ORTHO05D007909 7.8e-13 78.2 101 45.5
arahy.Tifrunner.gnm1.ann1.TR51Z4 Arachis hypogaea HOM05D006252 ORTHO05D007909 6.2e-10 68.6 44 70.5
MELO3C029084.2 Cucumis melo HOM05D006252 ORTHO05D007909 3.1e-09 66.2 59 55.9
Zm00001eb258210 Zea mays HOM05D000274 ORTHO05D006772 3.1e-09 66.2 64 53.1


User provided reference genes

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