Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g026080 Solanum pennellii HOM05D006101 ORTHO05D007422 1.2e-266 922.5 464 100.0
Solyc11g066340.2 Solanum lycopersicum HOM05D006101 ORTHO05D007422 1.4e-262 909.1 464 98.3
PGSC0003DMG400000413 Solanum tuberosum HOM05D006101 ORTHO05D007422 5.4e-246 854.0 461 93.5
CAN.G546.34 Capsicum annuum HOM05D006101 ORTHO05D007422 1.1e-222 776.5 462 84.2
Nitab4.5_0000329g0130 Nicotiana tabacum HOM05D006101 ORTHO05D007422 4.8e-210 734.6 449 81.3
Peaxi162Scf00086g01114 Petunia axillaris HOM05D006101 ORTHO05D007422 9.8e-195 683.7 446 78.9
TAR636G3121 Trochodendron aralioides HOM05D006101 ORTHO05D007422 2.9e-154 549.3 468 57.3
Dinv16214 Davidia involucrata HOM05D006101 ORTHO05D007422 4.1e-153 545.4 461 58.8
CSS0020443 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 2.4e-148 529.6 459 58.2
GSVIVG01031479001 Vitis vinifera HOM05D006101 ORTHO05D007422 5.8e-147 525.0 460 57.4
Nitab4.5_0003880g0040 Nicotiana tabacum HOM05D006101 ORTHO05D007422 4.9e-146 521.9 466 63.1
Cc01_g10370 Coffea canephora HOM05D006101 ORTHO05D007422 6.0e-144 515.0 469 56.3
Hma1.2p1_0051F.1_g029390 Hydrangea macrophylla HOM05D006101 ORTHO05D007422 1.7e-143 513.5 437 59.5
QL01p015279 Quercus lobata HOM05D006101 ORTHO05D007422 1.7e-143 513.5 463 55.3
CiPaw.13G123600 Carya illinoinensis HOM05D006101 ORTHO05D007422 3.0e-143 512.7 461 55.3
Cfa010291 Carpinus fangiana HOM05D006101 ORTHO05D007422 3.6e-141 505.8 464 55.4
Haze_23705 Corylus avellana HOM05D006101 ORTHO05D007422 1.5e-139 500.4 462 55.4
CSS0026133 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 1.3e-138 497.3 411 59.6
Manes.04G013700 Manihot esculenta HOM05D006101 ORTHO05D007422 1.4e-137 493.8 464 52.6
Atru.chr3.3528 Acer truncatum HOM05D006101 ORTHO05D007422 1.2e-136 490.7 455 53.8
Potri.009G006200 Populus trichocarpa HOM05D006101 ORTHO05D007422 4.6e-136 488.8 461 51.8
Oeu007313.2 Olea europaea HOM05D006101 ORTHO05D007422 7.9e-136 488.0 500 52.2
Lsat_1_v5_gn_6_44300 Lactuca sativa HOM05D006101 ORTHO05D007422 2.3e-135 486.5 454 53.3
Migut.D02287 Erythranthe guttata HOM05D006101 ORTHO05D007422 8.7e-135 484.6 467 53.7
Lj2C1009G5 Lonicera japonica HOM05D006101 ORTHO05D007422 1.9e-134 483.4 496 51.2
MSTRG.21091 Avicennia marina HOM05D006101 ORTHO05D007422 3.3e-134 482.6 465 52.9
Thecc.09G350300 Theobroma cacao HOM05D006101 ORTHO05D007422 6.2e-133 478.4 460 52.6
MD11G1147300 Malus domestica HOM05D006101 ORTHO05D007422 9.0e-132 474.6 458 51.5
ClCG03G002470 Citrullus lanatus HOM05D006101 ORTHO05D007422 2.0e-131 473.4 458 49.8
Actinidia03696 Actinidia chinensis HOM05D006101 ORTHO05D007422 9.9e-131 471.1 459 54.0
TWI75G1238 Tripterygium wilfordii HOM05D006101 ORTHO05D007422 3.8e-130 469.2 456 51.3
HanXRQChr13g0396251 Helianthus annuus HOM05D006101 ORTHO05D007422 4.9e-130 468.8 455 51.2
Prupe.6G111800 Prunus persica HOM05D006101 ORTHO05D007422 4.9e-130 468.8 462 52.2
CsaV3_1G013150 Cucumis sativus L. HOM05D006101 ORTHO05D007422 1.1e-129 467.6 458 49.3
Lalb_Chr19g0136961 Lupinus albus HOM05D006101 ORTHO05D007422 9.3e-129 464.5 457 49.7
Carub.0004s0893 Capsella rubella HOM05D006101 ORTHO05D007422 2.1e-128 463.4 458 51.5
Sed0008610 Sechium edule HOM05D006101 ORTHO05D007422 2.7e-128 463.0 456 50.4
Duzib150G0708 Durio zibethinus HOM05D006101 ORTHO05D007422 1.8e-127 460.3 462 50.6
AT2G28130 Arabidopsis thaliana HOM05D006101 ORTHO05D007422 8.7e-127 458.0 457 50.5
Aqoxy1G01111 Aquilegia oxysepala HOM05D006101 ORTHO05D007422 2.5e-126 456.4 467 51.0
RcHm_v2.0_Chr5g0056961 Rosa chinensis HOM05D006101 ORTHO05D007422 3.3e-126 456.1 467 50.5
COL.COLO4_11107 Corchorus olitorius HOM05D006101 ORTHO05D007422 7.4e-126 454.9 456 51.5
THA.LOC104800579 Tarenaya hassleriana HOM05D006101 ORTHO05D007422 2.1e-125 453.4 459 48.8
Gohir.A03G029500 Gossypium hirsutum HOM05D006101 ORTHO05D007422 2.8e-125 453.0 462 50.6
PGR102G2892 Punica granatum HOM05D006101 ORTHO05D007422 8.1e-125 451.4 454 50.2
Gohir.D03G139000 Gossypium hirsutum HOM05D006101 ORTHO05D007422 3.1e-124 449.5 462 50.4
SalBow4G3219 Salvia bowleyana HOM05D006101 ORTHO05D007422 5.8e-123 445.3 461 50.1
Ciclev10028403m.g Citrus clementina HOM05D006101 ORTHO05D007422 7.6e-123 444.9 459 49.9
Phvul.011G085500 Phaseolus vulgaris HOM05D006101 ORTHO05D007422 1.7e-122 443.7 457 47.7
Gorai.003G145800 Gossypium raimondii HOM05D006101 ORTHO05D007422 2.2e-122 443.4 462 50.2
BcaB02g10150 Brassica carinata HOM05D006101 ORTHO05D007422 3.8e-122 442.6 456 49.6
BcaC02g10947 Brassica carinata HOM05D006101 ORTHO05D007422 1.4e-121 440.7 457 49.5
Sp4g10940 Schrenkiella parvula HOM05D006101 ORTHO05D007422 1.4e-121 440.7 457 49.0
Aa31LG5G8010 Aethionema arabicum HOM05D006101 ORTHO05D007422 2.5e-121 439.9 457 49.7
FvH4_3g30770 Fragaria vesca HOM05D006101 ORTHO05D007422 3.5e-120 436.0 466 49.1
SGA_v2.0_scaffold27G11561 Striga asiatica HOM05D006101 ORTHO05D007422 3.5e-120 436.0 468 48.9
Rhsim01G0211100 Rhododendron simsii HOM05D006101 ORTHO05D007422 5.1e-119 432.2 464 51.1
PSO063G0796 Papaver somniferum HOM05D006101 ORTHO05D007422 1.1e-118 431.0 472 48.1
PSO339G3309 Papaver somniferum HOM05D006101 ORTHO05D007422 1.1e-118 431.0 473 48.2
AL4G22020 Arabidopsis lyrata HOM05D006101 ORTHO05D007422 7.4e-118 428.3 457 49.2
VMungo1127G1509 Vigna mungo HOM05D006101 ORTHO05D007422 1.3e-117 427.6 460 47.2
MELO3C004994.2 Cucumis melo HOM05D006101 ORTHO05D007422 1.6e-117 427.2 502 44.4
C04p23380 Brassica napus HOM05D006101 ORTHO05D007422 2.1e-117 426.8 457 48.8
Glyma.11G193400 Glycine max HOM05D006101 ORTHO05D007422 8.2e-117 424.9 457 47.3
Lj3g0002990 Lotus japonicus HOM05D006101 ORTHO05D007422 8.2e-117 424.9 460 45.7
BolC4t23840H Brassica oleracea HOM05D006101 ORTHO05D007422 1.1e-116 424.5 457 48.8
FAN11G1700 Fragaria x ananassa HOM05D002446 ORTHO05D007422 1.8e-116 423.7 470 48.5
Eucgr.B03934 Eucalyptus grandis HOM05D006101 ORTHO05D007422 4.1e-116 422.5 463 49.0
CARHR120970 Cardamine hirsuta HOM05D006101 ORTHO05D007422 6.9e-116 421.8 458 47.2
CANSAT56G2622 Cannabis sativa HOM05D006101 ORTHO05D007422 9.0e-116 421.4 449 48.3
Medtr4g057493 Medicago truncatula HOM05D006101 ORTHO05D007422 5.9e-115 418.7 457 45.7
Sc06g0010850 Simmondsia chinensis HOM05D006101 ORTHO05D007422 2.9e-114 416.4 460 47.8
Ca_30122_v3 Cicer arietinum L. HOM05D006101 ORTHO05D007422 1.4e-113 414.1 456 46.5
FAN21G1086 Fragaria x ananassa HOM05D006101 ORTHO05D007422 7.2e-113 411.8 466 48.5
FAN25G1259 Fragaria x ananassa HOM05D006101 ORTHO05D007422 1.2e-112 411.0 468 47.2
FAN16G0923 Fragaria x ananassa HOM05D006101 ORTHO05D007422 3.5e-112 409.5 466 47.2
Psat0s1387g0080 Pisum sativum HOM05D006101 ORTHO05D007422 3.5e-112 409.5 458 45.6
BraA07t29579Z Brassica rapa HOM05D006101 ORTHO05D007422 7.9e-112 408.3 458 47.2
Nn2g13844 Nelumbo nucifera HOM05D006101 ORTHO05D007422 1.0e-111 407.9 402 51.2
A07p18660 Brassica napus HOM05D006101 ORTHO05D007422 3.9e-111 406.0 469 46.9
vmacro14396 Vaccinium macrocarpon HOM05D006101 ORTHO05D007422 5.7e-110 402.1 448 48.2
ATR0088G017 Amborella trichopoda HOM05D006101 ORTHO05D007422 2.2e-109 400.2 438 45.2
Sabra09G0003500 Salix brachista HOM05D006101 ORTHO05D007422 2.2e-109 400.2 384 49.2
Ca_02469_v3 Cicer arietinum L. HOM05D006101 ORTHO05D007422 3.7e-109 399.4 456 46.5
ECA233G2185 Erigeron canadensis HOM05D006101 ORTHO05D007422 1.4e-108 397.5 462 45.2
Thhalv10016576m.g Eutrema salsugineum HOM05D006101 ORTHO05D007422 6.9e-108 395.2 473 45.7
MBI13_g39328_MAGBIO Magnolia biondii HOM05D006101 ORTHO05D007422 1.5e-99 367.5 558 38.5
Os01g0241100 Oryza sativa ssp. japonica HOM05D006101 ORTHO05D007422 1.5e-99 367.5 464 44.6
CDE09G0605 Ceratophyllum demersum HOM05D006101 ORTHO05D007422 4.5e-99 365.9 462 43.5
EL10Ac9g22610 Beta vulgaris HOM05D006101 ORTHO05D007422 1.0e-98 364.8 468 42.7
Dinv29372 Davidia involucrata HOM05D006101 ORTHO05D007422 2.7e-96 356.7 340 52.9
AUR62029180 Chenopodium quinoa HOM05D006101 ORTHO05D007422 5.1e-95 352.4 472 42.2
DCAR_018770 Daucus carota HOM05D006101 ORTHO05D007422 6.7e-87 325.5 372 44.9
HPP92_020176 Vanilla planifolia HOM05D006101 ORTHO05D007422 8.5e-82 308.5 462 39.2
unitig_747.g21973 Utricularia gibba HOM05D006101 ORTHO05D007422 2.7e-80 303.5 358 43.3
arahy.Tifrunner.gnm1.ann1.P58SHS Arachis hypogaea HOM05D006101 ORTHO05D007422 1.7e-77 294.3 473 36.6
arahy.Tifrunner.gnm1.ann1.V5BWPF Arachis hypogaea HOM05D006101 ORTHO05D007422 1.6e-75 287.7 465 36.3
arahy.Tifrunner.gnm1.ann1.66BK9V Arachis hypogaea HOM05D006101 ORTHO05D007422 2.0e-75 287.3 459 36.6
Ah.01g014140 Amaranthus hybridus HOM05D006101 ORTHO05D007422 1.9e-73 280.8 483 36.4
Glyma.12G080600 Glycine max HOM05D006101 ORTHO05D007422 2.7e-72 276.9 374 38.2
Hma1.2p1_0051F.1_g029400 Hydrangea macrophylla HOM05D006101 ORTHO05D007422 4.0e-71 273.1 236 59.3
Hund08365 Selenicereus undatus HOM05D006101 ORTHO05D007422 2.6e-70 270.4 458 36.9
AUR62014957 Chenopodium quinoa HOM05D006101 ORTHO05D007422 1.9e-65 254.2 372 38.4
Zm00001eb118850 Zea mays HOM05D006101 ORTHO05D007422 8.3e-61 238.8 349 39.8
HanXRQChr04g0111151 Helianthus annuus HOM05D006101 ORTHO05D007422 1.5e-57 228.0 292 41.4
VMungo1215G2511 Vigna mungo HOM05D006101 ORTHO05D007422 3.2e-44 183.7 321 34.0
SHI06228 Sapria himalayana HOM05D006101 ORTHO05D007422 4.6e-43 179.9 195 45.6
arahy.Tifrunner.gnm1.ann1.KM9ELV Arachis hypogaea HOM05D006101 ORTHO05D007422 1.6e-35 154.8 274 34.3
Pp3c4_7040 Physcomitrium patens HOM05D006101 ORTHO05D007422 1.9e-33 147.9 454 26.2
SEGI_30921 Sequoiadendron giganteum HOM05D006101 ORTHO05D007422 1.8e-31 141.4 219 35.6
Mapoly0094s0062 Marchantia polymorpha HOM05D006101 ORTHO05D007422 3.2e-28 130.6 327 26.9
Actinidia20431 Actinidia chinensis HOM05D006101 ORTHO05D007422 2.3e-26 124.4 115 51.3
SEGI_35146 Sequoiadendron giganteum HOM05D006101 ORTHO05D007422 6.2e-24 116.3 129 46.5
arahy.Tifrunner.gnm1.ann1.PH2QKZ Arachis hypogaea HOM05D006101 ORTHO05D007422 7.6e-22 109.4 232 29.3
TPR.G36765 Trifolium pratense HOM05D006101 ORTHO05D007422 7.9e-19 99.4 85 58.8
SHI06230 Sapria himalayana HOM05D006101 ORTHO05D007422 3.9e-18 97.1 136 39.0
arahy.Tifrunner.gnm1.ann1.EU9JMW Arachis hypogaea HOM05D006101 ORTHO05D007422 1.9e-17 94.7 179 34.1
SMO351G0356 Selaginella moellendorffii HOM05D006101 ORTHO05D007422 7.4e-17 92.8 318 23.9
arahy.Tifrunner.gnm1.ann1.88XJ4T Arachis hypogaea HOM05D006101 ORTHO05D007422 5.8e-14 83.2 115 41.7


User provided reference genes

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