Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g025970 Solanum pennellii HOM05D007495 ORTHO05D009552 7.0e-102 374.0 197 100.0
Solyc11g066240.3 Solanum lycopersicum HOM05D007495 ORTHO05D009552 6.8e-97 357.5 198 97.0
PGSC0003DMG400000407 Solanum tuberosum HOM05D007495 ORTHO05D009552 4.4e-96 354.8 197 92.9
Sopen01g017570 Solanum pennellii HOM05D007495 ORTHO05D009552 4.6e-93 344.7 197 89.8
PGSC0003DMG400010906 Solanum tuberosum HOM05D007495 ORTHO05D009552 7.8e-93 344.0 197 93.4
Nitab4.5_0000329g0280 Nicotiana tabacum HOM05D007495 ORTHO05D009552 1.7e-76 289.7 203 76.8
Nitab4.5_0005092g0010 Nicotiana tabacum HOM05D007495 ORTHO05D009552 2.5e-75 285.8 203 75.4
Peaxi162Scf00892g00019 Petunia axillaris HOM05D007495 ORTHO05D009552 1.2e-64 250.4 162 79.6
Solyc01g034070.2 Solanum lycopersicum HOM05D007495 ORTHO05D009552 1.2e-61 240.4 139 87.8
Oeu018477.1 Olea europaea HOM05D007495 ORTHO05D009552 1.4e-57 226.9 191 67.0
Cc01_g10460 Coffea canephora HOM05D007495 ORTHO05D009552 2.4e-57 226.1 197 62.9
MSTRG.17767 Avicennia marina HOM05D007495 ORTHO05D009552 2.6e-56 222.6 187 64.2
SGA_v2.0_scaffold436G51603 Striga asiatica HOM05D007495 ORTHO05D009552 2.1e-53 213.0 192 63.0
Migut.N02567 Erythranthe guttata HOM05D007495 ORTHO05D009552 4.6e-53 211.8 169 65.7
CSS0017583 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 6.7e-52 208.0 191 62.8
Lj2C1012G12 Lonicera japonica HOM05D007495 ORTHO05D009552 6.7e-52 208.0 173 64.7
Dinv34730 Davidia involucrata HOM05D007495 ORTHO05D009552 8.7e-52 207.6 175 67.4
Hma1.2p1_0051F.1_g029310 Hydrangea macrophylla HOM05D007495 ORTHO05D009552 2.5e-51 206.1 175 62.9
GSVIVG01031491001 Vitis vinifera HOM05D007495 ORTHO05D009552 4.3e-51 205.3 170 61.8
SalBow3G3637 Salvia bowleyana HOM05D007495 ORTHO05D009552 1.6e-50 203.4 182 59.9
Rhsim13G0099600 Rhododendron simsii HOM05D007495 ORTHO05D009552 6.2e-50 201.4 161 68.3
SalBow1G5708 Salvia bowleyana HOM05D007495 ORTHO05D009552 3.1e-49 199.1 180 58.9
QL01p015526 Quercus lobata HOM05D007495 ORTHO05D009552 4.0e-49 198.7 172 59.9
Actinidia24137 Actinidia chinensis HOM05D007495 ORTHO05D009552 9.0e-49 197.6 176 63.6
DCAR_018778 Daucus carota HOM05D007495 ORTHO05D009552 2.9e-47 192.6 161 65.2
Manes.04G014200 Manihot esculenta HOM05D007495 ORTHO05D009552 8.4e-47 191.0 175 60.6
Nn6g35262 Nelumbo nucifera HOM05D007495 ORTHO05D009552 7.1e-46 188.0 173 56.6
ClCG02G021490 Citrullus lanatus HOM05D007495 ORTHO05D009552 9.3e-46 187.6 169 61.5
Lsat_1_v5_gn_2_96660 Lactuca sativa HOM05D007495 ORTHO05D009552 2.1e-45 186.4 178 56.7
Ciclev10029419m.g Citrus clementina HOM05D007495 ORTHO05D009552 7.9e-45 184.5 178 56.7
TAR633G0300 Trochodendron aralioides HOM05D007495 ORTHO05D009552 1.0e-44 184.1 173 59.0
Eucgr.B03939 Eucalyptus grandis HOM05D007495 ORTHO05D009552 2.3e-44 183.0 161 59.6
Prupe.6G109500 Prunus persica HOM05D007495 ORTHO05D009552 2.3e-44 183.0 164 59.8
Haze_23728 Corylus avellana HOM05D007495 ORTHO05D009552 5.1e-44 181.8 173 56.6
FAN25G1473 Fragaria x ananassa HOM05D007495 ORTHO05D009552 5.1e-44 181.8 170 57.1
vmacro03264 Vaccinium macrocarpon HOM05D007495 ORTHO05D009552 5.1e-44 181.8 205 52.2
Atru.chr3.3537 Acer truncatum HOM05D007495 ORTHO05D009552 6.7e-44 181.4 172 55.2
CiPaw.13G124600 Carya illinoinensis HOM05D007495 ORTHO05D009552 8.7e-44 181.0 171 55.0
CsaV3_6G014270 Cucumis sativus L. HOM05D007495 ORTHO05D009552 8.7e-44 181.0 167 58.7
Cfa010302 Carpinus fangiana HOM05D007495 ORTHO05D009552 2.5e-43 179.5 173 56.1
HanXRQChr09g0259381 Helianthus annuus HOM05D007495 ORTHO05D009552 4.3e-43 178.7 167 55.1
FAN21G3793 Fragaria x ananassa HOM05D007495 ORTHO05D009552 1.6e-42 176.8 164 55.5
MELO3C026944.2 Cucumis melo HOM05D007495 ORTHO05D009552 3.7e-42 175.6 166 57.8
CAN.G546.21 Capsicum annuum HOM05D007495 ORTHO05D009552 8.2e-42 174.5 115 77.4
RcHm_v2.0_Chr5g0057451 Rosa chinensis HOM05D007495 ORTHO05D009552 8.2e-42 174.5 170 54.7
Ah.01g003160 Amaranthus hybridus HOM05D007495 ORTHO05D009552 1.4e-41 173.7 166 58.4
AUR62029199 Chenopodium quinoa HOM05D007495 ORTHO05D009552 1.4e-41 173.7 167 58.1
Hund08367 Selenicereus undatus HOM05D007495 ORTHO05D009552 1.4e-41 173.7 173 53.8
AUR62014942 Chenopodium quinoa HOM05D007495 ORTHO05D009552 3.1e-41 172.6 167 57.5
Potri.004G215300 Populus trichocarpa HOM05D007495 ORTHO05D009552 5.3e-41 171.8 161 54.7
Sabra04G0146300 Salix brachista HOM05D007495 ORTHO05D009552 6.9e-41 171.4 161 54.7
MD11G1146400 Malus domestica HOM05D007495 ORTHO05D009552 1.2e-40 170.6 167 56.3
arahy.Tifrunner.gnm1.ann1.F5YJ3L Arachis hypogaea HOM05D007495 ORTHO05D009552 3.4e-40 169.1 162 55.6
PGR102G0900 Punica granatum HOM05D007495 ORTHO05D009552 4.5e-40 168.7 164 53.7
arahy.Tifrunner.gnm1.ann1.KUS9HA Arachis hypogaea HOM05D007495 ORTHO05D009552 1.7e-39 166.8 173 52.6
MBI11_g41957_MAGBIO Magnolia biondii HOM05D007495 ORTHO05D009552 1.4e-38 163.7 167 54.5
Thecc.09G349500 Theobroma cacao HOM05D007495 ORTHO05D009552 3.2e-38 162.5 169 51.5
EL10Ac9g22596 Beta vulgaris HOM05D007495 ORTHO05D009552 9.3e-38 161.0 203 47.3
Sed0010722 Sechium edule HOM05D007495 ORTHO05D009552 1.2e-37 160.6 191 50.3
Aqoxy1G01135 Aquilegia oxysepala HOM05D007495 ORTHO05D009552 6.7e-36 154.8 155 52.3
ATR1132G058 Amborella trichopoda HOM05D007495 ORTHO05D009552 2.2e-34 149.8 174 48.9
Glyma.13G322700 Glycine max HOM05D007495 ORTHO05D009552 2.2e-34 149.8 178 44.4
Lalb_Chr24g0394861 Lupinus albus HOM05D007495 ORTHO05D009552 3.7e-34 149.1 175 48.0
Phvul.005G131100 Phaseolus vulgaris HOM05D007495 ORTHO05D009552 4.8e-34 148.7 156 46.8
VMungo1080G0225 Vigna mungo HOM05D007495 ORTHO05D009552 4.8e-34 148.7 156 44.9
PSO210G3489 Papaver somniferum HOM05D007495 ORTHO05D009552 6.3e-34 148.3 168 50.0
Duzib168G1093 Durio zibethinus HOM05D007495 ORTHO05D009552 1.4e-33 147.1 167 49.1
HPP92_026750 Vanilla planifolia HOM05D007495 ORTHO05D009552 1.8e-33 146.7 158 51.3
Duzib147G1262 Durio zibethinus HOM05D007495 ORTHO05D009552 4.1e-33 145.6 162 47.5
PSO210G2188 Papaver somniferum HOM05D007495 ORTHO05D009552 5.3e-33 145.2 168 48.2
THA.LOC104800583 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 2.0e-32 143.3 164 48.2
unitig_27.g25050 Utricularia gibba HOM05D007495 ORTHO05D009552 2.6e-32 142.9 108 65.7
THA.LOC104808393 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 7.7e-32 141.4 161 49.7
BcaB01g03091 Brassica carinata HOM05D007495 ORTHO05D009552 1.0e-31 141.0 159 48.4
A03p26400 Brassica napus HOM05D007495 ORTHO05D009552 2.2e-31 139.8 159 47.8
BraA03t11855Z Brassica rapa HOM05D007495 ORTHO05D009552 2.2e-31 139.8 159 47.8
C03p31690 Brassica napus HOM05D007495 ORTHO05D009552 2.9e-31 139.4 159 47.8
Carub.0004s0888 Capsella rubella HOM05D007495 ORTHO05D009552 2.9e-31 139.4 159 48.4
AT2G28105 Arabidopsis thaliana HOM05D007495 ORTHO05D009552 6.5e-31 138.3 159 48.4
BcaC01g04959 Brassica carinata HOM05D007495 ORTHO05D009552 1.1e-30 137.5 159 47.2
BolC3t15512H Brassica oleracea HOM05D007495 ORTHO05D009552 1.1e-30 137.5 159 47.2
Sp4g10910 Schrenkiella parvula HOM05D007495 ORTHO05D009552 1.9e-30 136.7 154 53.2
AL4G22050 Arabidopsis lyrata HOM05D007495 ORTHO05D009552 3.2e-30 136.0 159 47.2
CARHR120870 Cardamine hirsuta HOM05D007495 ORTHO05D009552 5.5e-30 135.2 159 47.2
CDE08G1192 Ceratophyllum demersum HOM05D007495 ORTHO05D009552 5.5e-30 135.2 152 46.1
FvH4_3g30910 Fragaria vesca HOM05D007495 ORTHO05D009552 1.2e-29 134.0 135 52.6
Thhalv10017338m.g Eutrema salsugineum HOM05D007495 ORTHO05D009552 1.6e-29 133.7 159 47.2
Gohir.A11G006200 Gossypium hirsutum HOM05D007495 ORTHO05D009552 1.6e-29 133.7 154 44.2
Gorai.007G006500 Gossypium raimondii HOM05D007495 ORTHO05D009552 2.3e-28 129.8 154 44.2
Aa31LG5G8040 Aethionema arabicum HOM05D002446 ORTHO05D002941 1.1e-27 127.5 166 43.4
Gohir.D11G005300 Gossypium hirsutum HOM05D007495 ORTHO05D009552 1.5e-27 127.1 154 43.5
CSS0034387 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 2.5e-27 126.3 118 63.6
Pp3c2_14140 Physcomitrium patens HOM05D007495 ORTHO05D009552 2.5e-27 126.3 158 43.7
COL.COLO4_31833 Corchorus olitorius HOM05D000070 ORTHO05D005950 1.8e-20 103.6 97 52.6
SEGI_19183 Sequoiadendron giganteum HOM05D007495 ORTHO05D009552 1.4e-17 94.0 104 44.2
QL01p015485 Quercus lobata HOM05D007495 ORTHO05D000007 5.3e-17 92.0 94 53.2
arahy.Tifrunner.gnm1.ann1.48A6J1 Arachis hypogaea HOM05D007495 ORTHO05D009552 7.0e-17 91.7 112 49.1
AagrBONN_evm.TU.Sc2ySwM_228.3308 Anthoceros agrestis HOM05D007495 ORTHO05D009552 3.5e-16 89.4 136 34.6
Thecc.09G349300 Theobroma cacao HOM05D007495 ORTHO05D009552 6.5e-15 85.1 112 43.8
TAR636G3027 Trochodendron aralioides HOM05D007495 ORTHO05D009552 8.5e-15 84.7 69 60.9
Actinidia07176 Actinidia chinensis HOM05D007495 ORTHO05D009552 2.3e-12 76.6 49 75.5
arahy.Tifrunner.gnm1.ann1.SCS43X Arachis hypogaea HOM05D007495 ORTHO05D009552 5.9e-08 62.0 44 61.4


User provided reference genes

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