Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g025420 Solanum pennellii HOM05D007890 ORTHO05D009945 9.0e-84 313.5 158 100.0
Solyc11g065680.1 Solanum lycopersicum HOM05D007890 ORTHO05D009945 3.8e-82 308.1 158 98.1
PGSC0003DMG400033336 Solanum tuberosum HOM05D007890 ORTHO05D009945 2.4e-76 288.9 158 93.7
Peaxi162Scf00004g02526 Petunia axillaris HOM05D007890 ORTHO05D009945 2.2e-50 202.6 153 68.6
Nitab4.5_0002741g0090 Nicotiana tabacum HOM05D007890 ORTHO05D009945 5.0e-50 201.4 156 69.2
Oeu025872.1 Olea europaea HOM05D007890 ORTHO05D009945 1.2e-30 137.1 100 69.0
MSTRG.17595 Avicennia marina HOM05D007890 ORTHO05D009945 1.1e-28 130.6 104 64.4
Dinv36254 Davidia involucrata HOM05D007890 ORTHO05D009945 1.6e-27 126.7 152 49.3
QL01p004625 Quercus lobata HOM05D007890 ORTHO05D009945 4.6e-27 125.2 147 51.7
vmacro04152 Vaccinium macrocarpon HOM05D007890 ORTHO05D009945 8.6e-26 120.9 99 62.6
Actinidia06910 Actinidia chinensis HOM05D007890 ORTHO05D009945 3.3e-25 119.0 149 47.0
Rhsim13G0220700 Rhododendron simsii HOM05D007890 ORTHO05D009945 3.3e-25 119.0 98 62.2
Thecc.09G234600 Theobroma cacao HOM05D007890 ORTHO05D009945 5.6e-25 118.2 152 46.1
SalBow5G2971 Salvia bowleyana HOM05D007890 ORTHO05D009945 9.5e-25 117.5 103 59.2
Duzib170G0138 Durio zibethinus HOM05D007890 ORTHO05D009945 6.2e-24 114.8 148 47.3
Gohir.A05G069600 Gossypium hirsutum HOM05D007890 ORTHO05D009945 1.4e-23 113.6 97 59.8
Gohir.D05G072500 Gossypium hirsutum HOM05D007890 ORTHO05D009945 1.4e-23 113.6 97 59.8
Gorai.009G073500 Gossypium raimondii HOM05D007890 ORTHO05D009945 1.4e-23 113.6 97 59.8
Hma1.2p1_0606F.1_g188050 Hydrangea macrophylla HOM05D007890 ORTHO05D009945 6.8e-23 111.3 155 47.1
Manes.13G093240 Manihot esculenta HOM05D007890 ORTHO05D009945 9.8e-22 107.5 149 46.3
TWI32G0791 Tripterygium wilfordii HOM05D007890 ORTHO05D009945 9.8e-22 107.5 161 44.7
EL10Ac4g10243 Beta vulgaris HOM05D007890 ORTHO05D009945 1.7e-21 106.7 151 41.1
Migut.N02322 Erythranthe guttata HOM05D007890 ORTHO05D009945 2.9e-21 105.9 107 57.0
Potri.001G257400 Populus trichocarpa HOM05D007890 ORTHO05D009945 3.7e-21 105.5 95 60.0
Eucgr.B03690 Eucalyptus grandis HOM05D007890 ORTHO05D009945 4.9e-21 105.1 105 55.2
HanXRQChr08g0209341 Helianthus annuus HOM05D007890 ORTHO05D009945 6.4e-21 104.8 90 61.1
Lj1P329T66 Lonicera japonica HOM05D007890 ORTHO05D009945 6.4e-21 104.8 94 58.5
GSVIVG01025250001 Vitis vinifera HOM05D007890 ORTHO05D009945 1.9e-20 103.2 122 49.2
Lsat_1_v5_gn_2_29200 Lactuca sativa HOM05D007890 ORTHO05D009945 2.4e-20 102.8 146 47.9
TAR633G1231 Trochodendron aralioides HOM05D007890 ORTHO05D009945 3.2e-20 102.4 112 52.7
Ciclev10016956m.g Citrus clementina HOM05D007890 ORTHO05D009945 7.0e-20 101.3 150 40.7
Atru.chr3.2706 Acer truncatum HOM05D007890 ORTHO05D009945 9.2e-20 100.9 152 42.8
Cfa009778 Carpinus fangiana HOM05D007890 ORTHO05D009945 1.6e-19 100.1 97 57.7
Lj6g0024098 Lotus japonicus HOM05D007890 ORTHO05D009945 2.0e-19 99.8 106 53.8
Nitab4.5_0001587g0050 Nicotiana tabacum HOM05D007890 ORTHO05D009945 2.0e-19 99.8 152 42.8
Ah.06g194130 Amaranthus hybridus HOM05D007890 ORTHO05D009945 6.0e-19 98.2 154 39.6
Glyma.08G336100 Glycine max HOM05D007890 ORTHO05D009945 1.0e-18 97.4 99 54.5
Lalb_Chr15g0082521 Lupinus albus HOM05D007890 ORTHO05D009945 1.3e-18 97.1 99 52.5
MD03G1174000 Malus domestica HOM05D007890 ORTHO05D009945 3.9e-18 95.5 111 49.5
TPR.G14719 Trifolium pratense HOM05D005961 ORTHO05D007391 5.0e-18 95.1 108 45.4
CiPaw.13G159700 Carya illinoinensis HOM05D007890 ORTHO05D009945 8.6e-18 94.4 95 58.9
arahy.Tifrunner.gnm1.ann1.I2HDTW Arachis hypogaea HOM05D007890 ORTHO05D009945 1.5e-17 93.6 96 54.2
Medtr3g061480 Medicago truncatula HOM05D007890 ORTHO05D009945 3.3e-17 92.4 135 41.5
MD11G1192200 Malus domestica HOM05D007890 ORTHO05D009945 4.3e-17 92.0 110 48.2
arahy.Tifrunner.gnm1.ann1.SWS7SX Arachis hypogaea HOM05D007890 ORTHO05D009945 5.6e-17 91.7 96 53.1
unitig_22.g5692 Utricularia gibba HOM05D007890 ORTHO05D009945 9.5e-17 90.9 105 48.6
ClCG02G023170 Citrullus lanatus HOM05D007890 ORTHO05D009945 2.1e-16 89.7 99 47.5
Sabra16G0157400 Salix brachista HOM05D007890 ORTHO05D009945 2.8e-16 89.4 178 38.2
AT2G01870 Arabidopsis thaliana HOM05D007890 ORTHO05D009945 4.7e-16 88.6 114 43.9
ECA233G3563 Erigeron canadensis HOM05D000013 ORTHO05D004590 1.4e-15 87.0 94 54.3
THA.LOC104801952 Tarenaya hassleriana HOM05D007890 ORTHO05D009945 1.4e-15 87.0 98 50.0
CARHR144430 Cardamine hirsuta HOM05D007890 ORTHO05D009945 1.8e-15 86.7 104 47.1
Psat5g163960 Pisum sativum HOM05D007890 ORTHO05D009945 2.3e-15 86.3 128 43.0
MELO3C014589.2 Cucumis melo HOM05D007890 ORTHO05D009945 5.2e-15 85.1 94 48.9
AL5G10980 Arabidopsis lyrata HOM05D007890 ORTHO05D009945 6.8e-15 84.7 122 44.3
BcaC06g31267 Brassica carinata HOM05D007890 ORTHO05D009945 1.5e-14 83.6 111 47.7
RcHm_v2.0_Chr5g0052301 Rosa chinensis HOM05D007890 ORTHO05D009945 2.0e-14 83.2 91 50.5
FAN21G3432 Fragaria x ananassa HOM05D007890 ORTHO05D009945 2.6e-14 82.8 142 40.8
Aqoxy2G00189 Aquilegia oxysepala HOM05D007890 ORTHO05D009945 3.4e-14 82.4 97 47.4
FAN16G0819 Fragaria x ananassa HOM05D007890 ORTHO05D009945 3.4e-14 82.4 95 48.4
Carub.0005s0083 Capsella rubella HOM05D007890 ORTHO05D009945 4.4e-14 82.0 107 49.5
FvH4_3g28750 Fragaria vesca HOM05D007890 ORTHO05D009945 7.5e-14 81.3 143 39.9
FAN11G2622 Fragaria x ananassa HOM05D007890 ORTHO05D009945 7.5e-14 81.3 143 39.9
Sp2g13290 Schrenkiella parvula HOM05D007890 ORTHO05D009945 9.8e-14 80.9 110 44.5
BcaC06g34102 Brassica carinata HOM05D007890 ORTHO05D009945 1.3e-13 80.5 113 45.1
C07p32670 Brassica napus HOM05D001297 ORTHO05D001135 1.3e-13 80.5 113 45.1
BolC7t43788H Brassica oleracea HOM05D001297 ORTHO05D001135 1.7e-13 80.1 114 44.7
Thhalv10005015m.g Eutrema salsugineum HOM05D007890 ORTHO05D009945 1.7e-13 80.1 101 47.5
Phvul.006G062000 Phaseolus vulgaris HOM05D007890 ORTHO05D009945 1.7e-13 80.1 152 36.2
A06p43960 Brassica napus HOM05D001297 ORTHO05D001135 3.7e-13 79.0 96 47.9
BraA06t27271Z Brassica rapa HOM05D001297 ORTHO05D001135 3.7e-13 79.0 96 47.9
CsaV3_6G039340 Cucumis sativus L. HOM05D007890 ORTHO05D009945 3.7e-13 79.0 94 46.8
Prupe.4G250100 Prunus persica HOM05D007890 ORTHO05D009945 8.3e-13 77.8 97 46.4
VMungo0540G1907 Vigna mungo HOM05D007890 ORTHO05D009945 8.3e-13 77.8 126 37.3
Sed0013757 Sechium edule HOM05D007890 ORTHO05D009945 1.4e-12 77.0 98 38.8
CDE05G2272 Ceratophyllum demersum HOM05D007890 ORTHO05D009945 1.9e-12 76.6 113 42.5
PSO423G0105 Papaver somniferum HOM05D007890 ORTHO05D009945 1.9e-12 76.6 131 42.0
Aa31LG2G8040 Aethionema arabicum HOM05D007890 ORTHO05D009945 1.2e-11 73.9 136 39.7
PSO724G0038 Papaver somniferum HOM05D007890 ORTHO05D009945 3.0e-10 69.3 111 43.2
Nn2g15343 Nelumbo nucifera HOM05D007890 ORTHO05D009945 3.9e-10 68.9 88 46.6
Cpa.g.sc84.47 Carica papaya HOM05D007890 ORTHO05D009945 1.1e-09 67.4 180 32.2
MBI02_g09445_MAGBIO Magnolia biondii HOM05D007890 ORTHO05D009945 1.2e-08 63.9 129 36.4
Duzib170G0703 Durio zibethinus HOM05D007890 ORTHO05D009945 1.1e-07 60.8 101 43.6
PGR102G2636 Punica granatum HOM05D007890 ORTHO05D009945 2.3e-07 59.7 105 37.1
CSS0004739 Camellia sinensis var. sinensis HOM05D007890 ORTHO05D009945 1.2e-06 57.4 57 50.9


User provided reference genes

Program Settings