Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g025150 Solanum pennellii HOM05D004797 ORTHO05D005752 4.0e-236 821.2 469 100.0
PGSC0003DMG400029996 Solanum tuberosum HOM05D004797 ORTHO05D005752 4.2e-222 774.6 481 93.1
Solyc11g065370.3 Solanum lycopersicum HOM05D004797 ORTHO05D005752 1.8e-212 742.7 441 97.1
CAN.G717.4 Capsicum annuum HOM05D004797 ORTHO05D005752 1.2e-197 693.3 484 83.9
Nitab4.5_0006617g0070 Nicotiana tabacum HOM05D004797 ORTHO05D005752 1.7e-175 619.8 479 77.2
Peaxi162Scf00004g00318 Petunia axillaris HOM05D004797 ORTHO05D005752 2.8e-173 612.5 494 72.7
Nitab4.5_0002451g0050 Nicotiana tabacum HOM05D004797 ORTHO05D005752 1.2e-171 607.1 482 77.4
Dinv36236 Davidia involucrata HOM05D004797 ORTHO05D005752 4.8e-141 505.4 272 83.1
Dinv22162 Davidia involucrata HOM05D004797 ORTHO05D005752 1.3e-138 497.3 272 82.4
Actinidia11672 Actinidia chinensis HOM05D004797 ORTHO05D005752 1.1e-137 494.2 316 72.8
Cpa.g.sc84.33 Carica papaya HOM05D004797 ORTHO05D005752 4.7e-136 488.8 254 86.2
Thecc.09G237700 Theobroma cacao HOM05D004797 ORTHO05D005752 3.9e-135 485.7 270 81.9
Rhsim01G0192400 Rhododendron simsii HOM05D004797 ORTHO05D005752 5.1e-135 485.3 283 76.3
Gohir.D09G109400 Gossypium hirsutum HOM05D004797 ORTHO05D005752 1.5e-134 483.8 268 82.1
Gorai.006G127000 Gossypium raimondii HOM05D004797 ORTHO05D005752 1.5e-134 483.8 268 82.1
Ciclev10014796m.g Citrus clementina HOM05D004797 ORTHO05D005752 2.0e-134 483.4 266 82.3
Duzib170G0427 Durio zibethinus HOM05D004797 ORTHO05D005752 2.0e-134 483.4 270 81.9
Manes.14G004000 Manihot esculenta HOM05D004797 ORTHO05D005752 2.0e-134 483.4 253 86.2
Gohir.A09G112900 Gossypium hirsutum HOM05D004797 ORTHO05D005752 4.4e-134 482.3 268 81.7
Actinidia16344 Actinidia chinensis HOM05D004797 ORTHO05D005752 9.7e-134 481.1 284 77.1
EL10Ac4g10215 Beta vulgaris HOM05D004797 ORTHO05D005752 1.7e-133 480.3 255 84.3
COL.COLO4_28767 Corchorus olitorius HOM05D004797 ORTHO05D005752 1.7e-133 480.3 270 82.2
Ah.06g193930 Amaranthus hybridus HOM05D004797 ORTHO05D005752 1.8e-132 476.9 255 84.3
Nn2g15211 Nelumbo nucifera HOM05D004797 ORTHO05D005752 3.1e-132 476.1 291 75.6
Lsat_1_v5_gn_1_77340 Lactuca sativa HOM05D004797 ORTHO05D005752 5.3e-132 475.3 311 72.3
Atru.chr3.2667 Acer truncatum HOM05D004797 ORTHO05D005752 1.2e-131 474.2 265 80.8
AUR62000146 Chenopodium quinoa HOM05D004797 ORTHO05D005752 1.2e-131 474.2 265 81.1
Prupe.4G254200 Prunus persica HOM05D004797 ORTHO05D005752 1.5e-131 473.8 256 83.6
Hma1.2p1_2280F.1_g318720 Hydrangea macrophylla HOM05D004797 ORTHO05D005752 2.0e-131 473.4 270 80.0
Potri.009G051400 Populus trichocarpa HOM05D004797 ORTHO05D005752 2.0e-131 473.4 269 81.4
SGA_v2.0_scaffold42G16076 Striga asiatica HOM05D004797 ORTHO05D005752 2.6e-131 473.0 254 83.1
AUR62019327 Chenopodium quinoa HOM05D004797 ORTHO05D005752 4.5e-131 472.2 255 83.1
THA.LOC104817914 Tarenaya hassleriana HOM05D004797 ORTHO05D005752 5.9e-131 471.9 255 82.4
VMungo1127G0838 Vigna mungo HOM05D004797 ORTHO05D005752 5.9e-131 471.9 255 82.0
Eucgr.J00747 Eucalyptus grandis HOM05D004797 ORTHO05D005752 7.7e-131 471.5 269 77.7
Oeu025884.1 Olea europaea HOM05D004797 ORTHO05D005752 1.0e-130 471.1 268 80.6
TAR633G1546 Trochodendron aralioides HOM05D004797 ORTHO05D005752 1.0e-130 471.1 291 76.3
Potri.001G256000 Populus trichocarpa HOM05D004797 ORTHO05D005752 1.3e-130 470.7 254 83.5
MD03G1172400 Malus domestica HOM05D004797 ORTHO05D005752 2.2e-130 469.9 252 84.1
MD11G1190300 Malus domestica HOM05D004797 ORTHO05D005752 5.0e-130 468.8 256 82.8
Nn7g36315 Nelumbo nucifera HOM05D004797 ORTHO05D005752 5.0e-130 468.8 255 83.1
MELO3C015173.2 Cucumis melo HOM05D004797 ORTHO05D005752 6.5e-130 468.4 255 82.4
Phvul.011G022800 Phaseolus vulgaris HOM05D004797 ORTHO05D005752 6.5e-130 468.4 269 77.7
Carub.0001s4032 Capsella rubella HOM05D004797 ORTHO05D005752 8.5e-130 468.0 255 82.0
ClCG03G013100 Citrullus lanatus HOM05D004797 ORTHO05D005752 1.4e-129 467.2 255 82.0
arahy.Tifrunner.gnm1.ann1.IKU8UZ Arachis hypogaea HOM05D004797 ORTHO05D005752 1.9e-129 466.8 255 82.0
SalBow8G4383 Salvia bowleyana HOM05D004797 ORTHO05D005752 3.2e-129 466.1 289 72.7
arahy.Tifrunner.gnm1.ann1.BIMS8G Arachis hypogaea HOM05D004797 ORTHO05D005752 4.2e-129 465.7 255 81.6
CANSAT54G0946 Cannabis sativa HOM05D004797 ORTHO05D005752 4.2e-129 465.7 267 79.8
CsaV3_1G042960 Cucumis sativus L. HOM05D004797 ORTHO05D005752 4.2e-129 465.7 255 81.6
GSVIVG01025234001 Vitis vinifera HOM05D004797 ORTHO05D005752 4.2e-129 465.7 347 65.7
Hund07473 Selenicereus undatus HOM05D004797 ORTHO05D005752 5.5e-129 465.3 255 81.6
TAR623G0783 Trochodendron aralioides HOM05D004797 ORTHO05D005752 7.2e-129 464.9 288 75.0
ECA248G3299 Erigeron canadensis HOM05D004797 ORTHO05D005752 9.4e-129 464.5 307 69.7
MSTRG.18441 Avicennia marina HOM05D004797 ORTHO05D005752 1.2e-128 464.2 291 72.9
BcaB07g33593 Brassica carinata HOM05D004797 ORTHO05D005752 2.7e-128 463.0 264 79.2
Aa31LG10G3600 Aethionema arabicum HOM05D004797 ORTHO05D005752 3.6e-128 462.6 255 81.6
vmacro14270 Vaccinium macrocarpon HOM05D004797 ORTHO05D005752 3.6e-128 462.6 325 66.5
Lalb_Chr01g0001051 Lupinus albus HOM05D004797 ORTHO05D005752 8.0e-128 461.5 255 80.8
CiPaw.14G117300 Carya illinoinensis HOM05D004797 ORTHO05D005752 1.0e-127 461.1 256 81.2
Glyma.12G020200 Glycine max HOM05D004797 ORTHO05D005752 1.4e-127 460.7 255 81.6
RcHm_v2.0_Chr5g0052831 Rosa chinensis HOM05D004797 ORTHO05D005752 1.8e-127 460.3 255 81.6
Sp1g38120 Schrenkiella parvula HOM05D004797 ORTHO05D005752 3.0e-127 459.5 255 80.4
TPR.G13744 Trifolium pratense HOM05D004797 ORTHO05D005752 3.9e-127 459.1 253 80.6
Hund22004 Selenicereus undatus HOM05D004797 ORTHO05D005752 8.8e-127 458.0 307 71.7
AL1G59340 Arabidopsis lyrata HOM05D004797 ORTHO05D005752 1.5e-126 457.2 255 80.4
MSTRG.12462 Avicennia marina HOM05D004797 ORTHO05D005752 3.3e-126 456.1 291 72.9
CARHR041620 Cardamine hirsuta HOM05D004797 ORTHO05D005752 3.3e-126 456.1 265 76.2
Thhalv10011431m.g Eutrema salsugineum HOM05D004797 ORTHO05D005752 3.3e-126 456.1 442 57.5
Lalb_Chr03g0024481 Lupinus albus HOM05D004797 ORTHO05D005752 3.3e-126 456.1 255 80.8
FAN11G3886 Fragaria x ananassa HOM05D004797 ORTHO05D005752 5.7e-126 455.3 255 80.4
FAN21G1390 Fragaria x ananassa HOM05D004797 ORTHO05D005752 9.7e-126 454.5 268 77.2
Sabra09G0037500 Salix brachista HOM05D004797 ORTHO05D005752 9.7e-126 454.5 288 75.0
AT1G51450 Arabidopsis thaliana HOM05D004797 ORTHO05D005752 2.8e-125 453.0 255 79.6
C06p06610 Brassica napus HOM05D004797 ORTHO05D005752 2.8e-125 453.0 255 79.6
Lj3g0024081 Lotus japonicus HOM05D004797 ORTHO05D005752 3.7e-125 452.6 253 81.0
DCAR_029965 Daucus carota HOM05D004797 ORTHO05D005752 6.3e-125 451.8 291 72.2
Glyma.11G093700 Glycine max HOM05D004797 ORTHO05D005752 6.3e-125 451.8 255 79.6
TWI32G1158 Tripterygium wilfordii HOM05D004797 ORTHO05D005752 1.1e-124 451.1 269 77.7
BcaC08g43313 Brassica carinata HOM05D004797 ORTHO05D005752 1.4e-124 450.7 255 79.2
FAN16G3639 Fragaria x ananassa HOM05D004797 ORTHO05D005752 3.1e-124 449.5 452 61.5
Migut.D00622 Erythranthe guttata HOM05D004797 ORTHO05D005752 4.1e-124 449.1 270 75.9
MBI19_g09239_MAGBIO Magnolia biondii HOM05D004797 ORTHO05D005752 4.1e-124 449.1 295 70.2
A06p02480 Brassica napus HOM05D004797 ORTHO05D005752 7.0e-124 448.4 256 78.9
BolC6t35774H Brassica oleracea HOM05D004797 ORTHO05D005752 9.1e-124 448.0 257 79.0
BraA06t23454Z Brassica rapa HOM05D004797 ORTHO05D005752 9.1e-124 448.0 257 78.6
TWI60G0872 Tripterygium wilfordii HOM05D004797 ORTHO05D005752 9.1e-124 448.0 467 52.5
Medtr4g076980 Medicago truncatula HOM05D004797 ORTHO05D005752 1.6e-123 447.2 253 79.4
ATR0733G130 Amborella trichopoda HOM05D004797 ORTHO05D005752 4.5e-123 445.7 298 69.1
Eucgr.B03708 Eucalyptus grandis HOM05D004797 ORTHO05D005752 1.0e-122 444.5 253 78.3
Migut.N02340 Erythranthe guttata HOM05D004797 ORTHO05D005752 2.2e-122 443.4 266 74.1
HanXRQChr01g0023561 Helianthus annuus HOM05D004797 ORTHO05D005752 1.1e-121 441.0 255 77.6
Sed0009811 Sechium edule HOM05D004797 ORTHO05D005752 1.5e-121 440.7 252 77.8
Aqoxy2G00222 Aquilegia oxysepala HOM05D004797 ORTHO05D005752 1.9e-121 440.3 294 69.7
vmacro04134 Vaccinium macrocarpon HOM05D004797 ORTHO05D005752 1.9e-121 440.3 253 79.8
MBI17_g23181_MAGBIO Magnolia biondii HOM05D004797 ORTHO05D005752 3.2e-121 439.5 251 75.7
HPP92_012324 Vanilla planifolia HOM05D004797 ORTHO05D005752 3.2e-121 439.5 301 68.1
PGR142G0717 Punica granatum HOM05D004797 ORTHO05D005752 4.2e-121 439.1 268 76.5
Cfa009790 Carpinus fangiana HOM05D004797 ORTHO05D005752 9.4e-121 438.0 234 84.2
CSS0044227 Camellia sinensis var. sinensis HOM05D004797 ORTHO05D005752 8.8e-119 431.4 257 76.3
Aqoxy1G00230 Aquilegia oxysepala HOM05D004797 ORTHO05D005752 1.7e-117 427.2 293 68.9
Cc01_g04890 Coffea canephora HOM05D004797 ORTHO05D005752 2.2e-117 426.8 233 81.5
Lj1A320G11 Lonicera japonica HOM05D004797 ORTHO05D005752 4.8e-117 425.6 234 80.3
PSO384G3237 Papaver somniferum HOM05D004797 ORTHO05D005752 1.1e-116 424.5 258 76.4
Rhsim13G0218000 Rhododendron simsii HOM05D004797 ORTHO05D005752 7.0e-116 421.8 319 63.3
PSO339G1463 Papaver somniferum HOM05D004797 ORTHO05D005752 2.7e-115 419.9 258 75.6
PSO339G4480 Papaver somniferum HOM05D004797 ORTHO05D005752 1.1e-113 414.5 258 74.0
Sc16g0011300 Simmondsia chinensis HOM05D004797 ORTHO05D005752 1.3e-109 401.0 266 73.3
SHI29796 Sapria himalayana HOM05D004797 ORTHO05D005752 1.1e-108 397.9 267 70.4
unitig_27.g24997 Utricularia gibba HOM05D004797 ORTHO05D005752 2.4e-108 396.7 296 62.8
CSS0012701 Camellia sinensis var. sinensis HOM05D004797 ORTHO05D005752 1.6e-107 394.0 265 68.7
PGR119G1354 Punica granatum HOM05D004797 ORTHO05D005752 1.3e-106 391.0 222 79.3
SEGI_00529 Sequoiadendron giganteum HOM05D004797 ORTHO05D005752 1.9e-105 387.1 299 62.2
CiPaw.13G156600 Carya illinoinensis HOM05D004797 ORTHO05D005752 3.0e-103 379.8 257 68.9
HPP92_012392 Vanilla planifolia HOM05D004797 ORTHO05D005752 1.7e-101 374.0 218 75.7
CiPaw.13G157500 Carya illinoinensis HOM05D004797 ORTHO05D005752 6.6e-98 362.1 254 68.1
Os12g0143200 Oryza sativa ssp. japonica HOM05D004797 ORTHO05D005752 4.7e-96 355.9 300 56.3
Os11g0146500 Oryza sativa ssp. japonica HOM05D004797 ORTHO05D005752 2.0e-94 350.5 259 62.2
QL01p004191 Quercus lobata HOM05D004797 ORTHO05D005752 7.0e-92 342.0 179 87.2
Zm00001eb092900 Zea mays HOM05D004797 ORTHO05D005752 1.1e-89 334.7 302 52.6
CDE06G0667 Ceratophyllum demersum HOM05D004328 ORTHO05D005210 4.4e-86 322.8 291 55.7
SMO361G0750 Selaginella moellendorffii HOM05D004797 ORTHO05D005752 1.2e-83 314.7 247 61.1
Ca_18973_v3 Cicer arietinum L. HOM05D004797 ORTHO05D005752 1.6e-83 314.3 173 82.1
Ca_29677_v3 Cicer arietinum L. HOM05D004797 ORTHO05D005752 1.6e-83 314.3 173 82.1
Actinidia23978 Actinidia chinensis HOM05D004797 ORTHO05D005752 1.3e-82 311.2 207 72.5
Psat7g172280 Pisum sativum HOM05D004797 ORTHO05D005752 3.0e-82 310.1 173 80.3
AagrBONN_evm.TU.Sc2ySwM_228.213 Anthoceros agrestis HOM05D004797 ORTHO05D005752 8.6e-82 308.5 264 58.3
FvH4_3g28490 Fragaria vesca HOM05D004797 ORTHO05D005752 2.1e-80 303.9 190 73.2
Haze_23164 Corylus avellana HOM05D004797 ORTHO05D005752 2.8e-80 303.5 174 78.7
Migut.L00817 Erythranthe guttata HOM05D004797 ORTHO05D005752 3.1e-79 300.1 187 73.8
Migut.L00239 Erythranthe guttata HOM05D004797 ORTHO05D005752 3.4e-78 296.6 184 75.0
Mapoly0036s0095 Marchantia polymorpha HOM05D004797 ORTHO05D005752 6.6e-74 282.3 278 54.0
Pp3c12_10080 Physcomitrium patens HOM05D004797 ORTHO05D005752 2.1e-72 277.3 281 52.0
unitig_60.g25644 Utricularia gibba HOM05D004797 ORTHO05D005752 1.1e-68 265.0 179 67.6
CBR_g54630 Chara braunii HOM05D004797 ORTHO05D005752 1.2e-67 261.5 261 50.6
CBR_g19286 Chara braunii HOM05D004797 ORTHO05D005752 5.6e-65 252.7 242 50.8
Os11g0145700 Oryza sativa ssp. japonica HOM05D004797 ORTHO05D005752 1.3e-64 251.5 203 57.6
CDE06G1612 Ceratophyllum demersum HOM05D004797 ORTHO05D005752 3.4e-62 243.4 288 45.8
Pp3c23_9320 Physcomitrium patens HOM05D004797 ORTHO05D005752 1.1e-60 238.4 191 60.7
CDE02G2983 Ceratophyllum demersum HOM05D004797 ORTHO05D005752 1.9e-57 227.6 217 55.8
CDE02G1762 Ceratophyllum demersum HOM05D004797 ORTHO05D005752 4.5e-54 216.5 170 65.3
Cre16.g670250 Chlamydomonas reinhardtii HOM05D004797 ORTHO05D005752 2.2e-53 214.2 259 45.6
Zm00001eb380670 Zea mays HOM05D008064 ORTHO05D005752 3.8e-53 213.4 181 54.7
Sed0024369 Sechium edule HOM05D004797 ORTHO05D005752 9.3e-52 208.8 230 48.7
Aqoxy3G03849 Aquilegia oxysepala HOM05D004797 ORTHO05D005752 8.1e-48 195.7 154 63.0
Aqoxy3G02211 Aquilegia oxysepala HOM05D004797 ORTHO05D004745 1.1e-47 195.3 150 64.7
PRCOL_00001849 Prasinoderma coloniale HOM05D004797 ORTHO05D005752 9.0e-47 192.2 243 44.4
CBR_g54627 Chara braunii HOM05D004797 ORTHO05D005752 1.0e-45 188.7 211 46.9
Migut.L00818 Erythranthe guttata HOM05D004797 ORTHO05D005752 1.3e-40 171.8 103 70.9
Zm00001eb115730 Zea mays HOM05D004797 ORTHO05D005752 2.4e-39 167.5 129 61.2
Zm00001eb287480 Zea mays HOM05D004797 ORTHO05D005752 4.1e-39 166.8 125 60.8
Psat7g172360 Pisum sativum HOM05D004797 ORTHO05D005752 3.2e-36 157.1 84 78.6
unitig_60.g25645 Utricularia gibba HOM05D004797 ORTHO05D005752 1.3e-21 108.6 75 62.7
QL06p032345 Quercus lobata HOM05D004797 ORTHO05D050637 7.0e-15 86.3 45 82.2
QL93p0275_0020 Quercus lobata HOM05D004797 ORTHO05D050637 7.0e-15 86.3 45 82.2
Pp3c19_1530 Physcomitrium patens HOM05D003906 ORTHO05D004776 3.7e-08 63.9 165 27.9
Cfa024013 Carpinus fangiana HOM05D040201 ORTHO05D034153 1.4e-07 62.0 141 30.5
CBR_g4334 Chara braunii HOM05D004874 ORTHO05D006796 2.0e-06 58.2 211 27.5
PRCOL_00005975 Prasinoderma coloniale HOM05D000032 ORTHO05D028824 5.9e-06 56.6 86 39.5


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